Xiphophorus maculatus (southern platyfish): 102220341
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Entry
102220341 CDS
T02923
Name
(RefSeq) protein transport protein Sec24C-like isoform X1
KO
K14007
protein transport protein SEC24
Organism
xma
Xiphophorus maculatus (southern platyfish)
Pathway
xma04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
102220341
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xma04131
]
102220341
Membrane trafficking [BR:
xma04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
102220341
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec23_trunk
Sec23_helical
Sec23_BS
zf-Sec23_Sec24
Gelsolin
Motif
Other DBs
NCBI-GeneID:
102220341
NCBI-ProteinID:
XP_014326035
UniProt:
M3ZKG4
LinkDB
All DBs
Position
12:6115907..6126950
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AA seq
1003 aa
AA seq
DB search
MMDAPSRNQSHPPCPPWAVQNGWSSDAPAGPLCNPLPDLQQLSLGCEPSQNLSYNHLQAS
GVYSKNDVAAFSTGSNSHPSMQYVCKVDQSIPDGLSPTIQERNKPPCSLPYNEVAQPMQH
YSPPNAYQAVDPSSYSQHTYRSLLNQPPAQHPLPVSFSCVEPQLNHNQHLASDGGNSGSF
VGFNDMLSSPSAPIQQQPLWSFAAFSKGSINDFVPTASPLDHNLTPQSPNSESRYGLNPE
LLPSAVKVMAEDRAEWDGKVFISEHFSRLPPLATTSCVIEDRGNVSPLAIRSITYCVPCD
GQTALLSRLPLGALVTPFFNQNECLKPIPLCEHTDCVVGCRWCGASMCPAMGWQDCGQRF
YCPFCGKLNEVPWQQYQPTKGAKGVRVDKDKRPELSMGSYETLNSEKGEAAALLLAIDVS
ASALRGGHLEFVAQQIHTLLTSLVREAGDASSDLRVGLMTYDSRIHLYDLSPDLSRPHML
VIAETEDMQLPVREGLLVSLKDCIESIDSVLQLIPQFGAECSDSSGLPIELPVKAGLAVL
QGLKCPGKLLIFHTAALIETGHTNSSSGFFGTNKPKSIFQPSEKAISLAKECIIQGCGVH
MFVLSQQDVGGAWPGHIPFLTGGALHTYSYLQGELDRERFSTDLKRIVETETAYKAELRI
FVSKDLRVSGCYGLFVPGSNPGHIAMATLNCRTTLAVELTHSKALDETRGAAVQVVLSYT
SQTGERRTRVHTLTLRCSRHLQDTFRNYQAETLLTFYCKKMYCAVLERPLQELRKELQTD
VTEALASYRKHCCSSSVSAGQLVLPQFLRALPVYVNSLRKSEVLLPGLRSSVHQRLQQRC
RVLGLDTRSTVRHFYPLLLPLLPSVDSSSPPDPEGALRCTSSSLDSSGLYLVHAPFTVLL
WVGTQVPAGTLVELFNASCFSSLPSGETNLPALENRLSIRVRSLISSLNSEVPYARKLVV
VKQGDTCEEALQRHLVEDKSPNGGASYADFLYHLHVNSVRLLL
NT seq
3012 nt
NT seq
+upstream
nt +downstream
nt
atgatggacgccccgtcccgtaatcagagccaccctccctgtccgccgtgggcggtccag
aatggctggtcctctgatgcgcctgcaggacctctctgcaatcctctccccgacctccag
caactcagcctgggctgtgaacccagccaaaacctgagctacaaccacctgcaggcatct
ggcgtttactctaagaatgatgttgctgccttttctactgggagcaactctcatcccagc
atgcagtatgtttgtaaagttgatcagagcattcctgatggtttatctcctactatccaa
gaaaggaacaaaccaccatgctctcttccatataatgaagtggcgcagccaatgcaacat
tattcccctcctaacgcttaccaagcagtagatccctcatcatattctcaacatacatat
cgaagtcttctgaatcagccaccagctcaacatcctcttcctgttagcttttcgtgtgtt
gaacctcagttaaaccataatcaacatcttgcatccgacgggggaaactctggatctttt
gttggatttaatgacatgctgagctcacccagcgctcccatccagcagcagcctctgtgg
agctttgcagcgttctctaaagggagcataaatgactttgtgcccactgcatctccactg
gatcataatttgacaccacagtctcccaactctgagtctcgttatggcctgaatcctgaa
ctcttaccaagcgctgtaaaagtgatggcagaggacagagcggagtgggacggaaaagtt
ttcatctcggagcatttttctcgcctgcctcctctggcgaccacttcctgtgtcatagag
gacagaggtaacgtaagcccgttggccatccgctctattacttactgcgtcccctgtgac
ggtcagacggcgctactcagccgactgccactaggggcgcttgtcactcccttcttcaat
caaaatgaatgcctgaagccgatccctctatgcgaacatacggattgtgtcgtgggctgt
cgttggtgcggcgcctccatgtgcccagcgatgggctggcaggactgtgggcagaggttt
tactgccccttctgtgggaaactcaatgaagtgccgtggcagcagtaccagcccaccaaa
ggagcgaagggggtccgggttgataaagacaagagacccgaactcagcatggggtcgtat
gaaacactcaactcagaaaagggtgaagctgctgctcttcttctagccatagatgtttct
gcctctgcactgagaggaggacacttagaatttgttgctcagcaaatacacacattgctc
acctcactggtcagagaggcaggagacgcttcatcagatctccgtgtgggtttgatgacg
tatgacagcaggatccacctgtacgacctcagtcctgacctttcccgtcctcacatgctg
gtcatcgctgagacggaagacatgcagcttcctgtgagggaggggcttctggtgtccctc
aaagactgcatagaaagtatagacagtgtgttgcagctcattcctcagtttggagctgag
tgcagtgactccagtggacttcccattgagcttcctgttaaagcaggcctggctgtactg
cagggcctgaagtgtccagggaagctgcttatcttccacacagccgccctgattgagacg
ggacacacaaactcttcctcagggttctttgggaccaacaaaccaaagtctatcttccag
ccatcagaaaaagccatctcattggctaaagagtgcatcatccagggatgcggcgtccac
atgtttgttctctcccagcaggatgtgggcggggcttggccgggccacattccatttcta
actggtggagctctgcacacctacagctacctccagggcgaactggacagagagcgtttc
agcacggatctgaagcggattgttgagacggaaacggcctacaaggctgagctccggata
ttcgtcagcaaagatttgcgtgtgtctggttgctatgggctgtttgtccctggttcgaac
cctggacacatcgccatggcaacactcaactgcaggacaactctggctgtggagctgacc
cacagcaaagctttggatgagacgagaggggcagccgttcaggttgtcctgtcttatact
tcccagacgggagagagaaggaccagagttcacactttgacactgagatgctcacgccac
ctacaggacactttcaggaactaccaggctgaaacccttctcactttctactgcaagaag
atgtactgtgcagtgttagagcgccctctgcaggagctgaggaaggaactgcagacagat
gtaacagaagctctggcgtcttaccgcaaacactgctgctcgtcttcagtgtctgctggc
cagctggtgcttcctcagttcctgcgagctcttccagtttacgtcaacagcctgaggaag
agtgaggttctgctgccgggtctgaggagctccgtccaccagcggctgcagcagcgctgc
cgggtgctgggcctcgacacccgcagcaccgtccgacacttctaccccctgctgctgcct
ctgctgccttcagttgacagctccagtcctccagacccagagggggcgctacggtgcacg
agttccagcctggactccagtggtctgtacctggttcacgcccccttcactgtgctgctc
tgggttggcactcaggtccctgcggggacgcttgttgagctcttcaacgccagctgcttc
tcttcgctgccttcaggcgagaccaaccttccagctctggaaaaccgtctgtccatcaga
gtccggtcactcatcagctcgctcaactccgaggttccctatgcccgcaagcttgtggtg
gtgaaacaaggcgacacctgcgaggaggcgctgcagcgccacctggtggaagacaaaagt
cccaacggaggagcgtcatatgcagacttcctgtatcatctccacgtcaactctgtccgt
ctcctgctgtga
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