Xiphophorus maculatus (southern platyfish): 102220405
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Entry
102220405 CDS
T02923
Symbol
nfatc4
Name
(RefSeq) nuclear factor of activated T-cells, cytoplasmic 4
KO
K17334
nuclear factor of activated T-cells, cytoplasmic 4
Organism
xma
Xiphophorus maculatus (southern platyfish)
Pathway
xma04020
Calcium signaling pathway
xma04148
Efferocytosis
xma04218
Cellular senescence
xma04310
Wnt signaling pathway
xma04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
102220405 (nfatc4)
04020 Calcium signaling pathway
102220405 (nfatc4)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
102220405 (nfatc4)
09143 Cell growth and death
04218 Cellular senescence
102220405 (nfatc4)
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
102220405 (nfatc4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xma03000
]
102220405 (nfatc4)
Transcription factors [BR:
xma03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) NF-AT
102220405 (nfatc4)
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GFIT
Motif
Pfam:
RHD_dimer
RHD_DNA_bind
TIG
Motif
Other DBs
NCBI-GeneID:
102220405
NCBI-ProteinID:
XP_023191309
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All DBs
Position
6:24266695..24295073
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AA seq
888 aa
AA seq
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MGAAPGSGWEEGEFEFKLVFEEDPPQRQIQGPSPARTAEPESSVGGEEEDDGALLRLDSS
NLDNHLAIAHAGHSINIPSPPPSSNQRAGMHSPPPRRAAVREFSGTYESLPARSVQVSES
CVVECPSIQITTISPEDDPAPPVPSYWDMGSGGGWDRERLYLPLLDPFSYRDRFPGSLSP
SPASSPSSRGWLSPASSCDSLLVEEEELNEANVGFGLSPSSRPTSPGGKKRRNSPLASPC
ISRRSSYSEDLQGCNLEGGESASQSQALPGSCELNIPQKTRKTSLEQLSPREVDQESGLG
RSSPCPLPETQQPRREPPSLGMDYLPVPPALAWGRTRASAHSPLFRSNALPPLDWPLPSQ
FDQYELRIEVQPRPHHRAHYETEGSRGAVKAAPTGHPVVKLCGYAERKPLSLQVFVGTAD
DRSIRPHPFYQIHRVTGKMVGTASHESVQAGTKLLDIPLNPENNMTALIDCAGILKLRNS
DIELRKGETDVGRKNTRVRLVFRTHLPVAPPVGPPGRVLALQVASLPIECSQRSAQELPV
IESVSVTSCSVEGGEELLLSGTNFLPISRVLFMERGTDGKLQWEEEAHVDRDNSNECLLC
VRVPAYSDLSVSRPVSVSLYVSNGKRKRSSTHCFKYLPVMFKEEDPLLSRPSVPPLDGGT
VGPPRMDRGFHVSDDRGLGFHLPPYPSTYSPPCPAMSYQEEYCPKPDSAVEEPVGSRAPL
SERNPSFENLELGFTELLPPLYPRGPQPPSPSPSPWLDSPYLSSSPSPSHSSSLSPFPTE
SPLANSPLPPIPTSPFPQYSTYPQELCPSPPSNPYQDACPAPYSHYEGWEPQGRMLGTSH
GGEGDAKNQECPLEFTSSASMHHITFEEVSEFIGEDIQAYQSGSHMNN
NT seq
2667 nt
NT seq
+upstream
nt +downstream
nt
atgggggccgcgccgggctcgggctgggaggagggcgagttcgagttcaagctggtgttt
gaggaagacccgcctcagcggcagatccaggggccgtccccggcgcgcacagccgagccg
gagagctccgtcggcggggaagaggaagatgatggcgccctgttgcggctggactccagc
aacctcgacaaccacttagccatcgctcatgcaggacactcaatcaacatccccagcccg
ccgccctcgtccaatcagagggcagggatgcattcgccacctccccgacgggccgccgtc
agagagttcagcggcacctatgagagcctgccggcccgctccgttcaggtgtcggagtcc
tgtgtggttgagtgccccagcattcagatcaccaccatttccccggaggatgacccggcg
ccgcccgtccccagctactgggacatgggcagcggcggcggctgggacagggagcgcctc
tacctccccctgctggaccctttctcctaccgcgaccggttccccggctccctcagcccc
agccccgcctccagcccgtcgtcccgcggctggctcagccccgcgtccagctgcgactcc
ctgctggtggaggaagaggagctcaatgaggccaatgtcggtttcggactctccccgtcc
tccaggcccacttccccaggaggaaagaagcgcaggaactctcctctggcgtctccctgc
atctcgcggaggagcagctactcggaggacctgcagggatgcaacctggagggcggagag
tccgcctcgcagtcgcaggcgctgcccggcagctgtgagctcaacatcccgcagaaaacc
aggaagacgtccctggagcagttgtctcccagagaagtggaccaggagtcgggtctgggc
cgaagctccccctgtccgctgccggagacccagcagcccaggagagagcccccatctctg
ggaatggactacctccctgttccccctgccctggcctggggcagaaccagagccagcgcc
cacagtcctctcttcaggtctaatgctttgcctccacttgactggccgctcccgtcccag
tttgaccagtatgagctgcgcatcgaggtgcagccccggccacaccatcgagcccactac
gagacggagggcagcagaggcgccgtcaaagccgcaccaacaggacatcctgttgtcaag
ctgtgcggttatgcagagaggaagccgctgtcgctgcaggttttcgtcggaacggctgac
gaccgctcaatcaggcctcatcctttctaccagatacacagggtgaccgggaagatggtc
ggcaccgccagccatgaaagcgtccaggcagggaccaaactgttggacatccccctcaac
cccgagaacaacatgaccgccctcatcgactgcgctgggattctgaaactgagaaactcc
gacatcgagctgcgaaaaggcgaaacggacgtcgggaggaaaaacacccgcgtgcgtctg
gtgtttcgtactcacctccctgtagcgccccctgtgggccctcccgggcgcgtcctggct
ctgcaggtcgcctctttacccattgaatgctctcagcggtcggcccaggagcttcctgtc
atcgagtccgtcagcgtcacgtcctgctcggtggagggaggcgaggagctgctgctgagc
ggcaccaacttcctgccgatctccagagtcctcttcatggagagaggcaccgatgggaaa
ctacagtgggaggaggaggcgcatgtggaccgggacaacagcaacgagtgtttgctgtgt
gtgagggttcctgcctacagcgacctctccgtcagtcggcctgtgtccgtcagtctgtac
gtctccaacgggaagaggaagcggagcagcacgcactgcttcaagtaccttcctgttatg
tttaaagaagaggatcctttgctgtcccgtccctctgttccccctctggacgggggaact
gtgggtccgcccagaatggacagaggcttccacgtgtccgacgaccgcggcctcggcttc
caccttcccccctacccctccacctactcccctccctgcccggccatgagctaccaagag
gagtactgccccaaacccgacagcgccgtggaggagccagtcgggtccagggcgccactg
tccgagcgtaaccccagctttgagaacctggagctgggcttcaccgaactgctcccccct
ctgtatccccgcggtcctcagcctccgtccccgtctccttccccatggctggactccccc
tacctgtcctcttcaccctctccgtcccactcctcctctctcagcccattccccactgaa
agccccctcgccaactccccgctgcccccaatccccacatcgcctttcccgcagtactcc
acttatcctcaggagctgtgtccctcgcctccgtccaacccttaccaggacgcctgtccg
gcgccgtactcccactacgagggctgggaacctcagggaaggatgctgggtacgagtcac
gggggagagggggacgccaagaaccaggagtgtccactggagtttaccagctcggcctct
atgcaccacattaccttcgaagaagtgtcagagttcatcggggaggacatccaggcctac
cagtcaggctcgcacatgaacaactag
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