Xiphophorus maculatus (southern platyfish): 102220424
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Entry
102220424 CDS
T02923
Symbol
dync1i1
Name
(RefSeq) cytoplasmic dynein 1 intermediate chain 1 isoform X3
KO
K10415
dynein cytoplasmic 1 intermediate chain
Organism
xma
Xiphophorus maculatus (southern platyfish)
Pathway
xma04145
Phagosome
xma04814
Motor proteins
xma05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
102220424 (dync1i1)
09142 Cell motility
04814 Motor proteins
102220424 (dync1i1)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
102220424 (dync1i1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
xma03036
]
102220424 (dync1i1)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
xma04812
]
102220424 (dync1i1)
Chromosome and associated proteins [BR:
xma03036
]
Eukaryotic type
Centromeric chromatin formation proteins
SAC (spindle assembly checkpoint) factors
Motor proteins
Dynein complex
102220424 (dync1i1)
Cytoskeleton proteins [BR:
xma04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Dyneins
102220424 (dync1i1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dynein_IC2
Beta-prop_THOC3
WD40_CDC20-Fz
WD40
Beta-prop_WDR3_1st
Beta-prop_EML
Beta-prop_WDR5
WD40_Prp19
WDR55
Beta-prop_WDR36-Utp21_1st
Beta-prop_RIG_2nd
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_HPS5
Beta-prop_WDR19_1st
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_C
EIF3I
Beta-prop_CAF1B_HIR1
Beta-prop_WDR3_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_NUP159_NUP214
Beta-prop_EIPR1
Beta-prop_SPT8
Motif
Other DBs
NCBI-GeneID:
102220424
NCBI-ProteinID:
XP_005802757
Ensembl:
ENSXMAG00000000722
LinkDB
All DBs
Position
13:complement(21425078..21485224)
Genome browser
AA seq
635 aa
AA seq
DB search
MSDKSDLKAELERKKQRLAQIREEKKRKEEERKKKEKSDSQQKTEVTPEDSDLDRKRRET
EALLQSIGISPEPPLVPTPVSPSKSVSTPSETGSQDSAEGGAAGRFRTLQWDTDPSVLQL
QADSVLGRKMQRLGASKIIQVDFLPKEVVSYSKETQTPVNTLLSEVEEEEEDEDMLEAKP
GPEAELRDEDDIKESKDGSFPVLRELTEEERQQILHSSEFQSFFDCSIRVMERALAEDSD
ILFDYSGRDLQDKEGDLGSGSSLSFSRLFYDEHWSKHRVITCLDWSPQYPELLVASYNNN
EDAPHEPDGVALVWNIKFKKATPEYIFHCQSPVVAVGFAKFHPNLVVGGTYSGQIVLWDN
RSHRRTPVQRTPLSAAAHTHPVYCVNVVGTQNANNLITVSTDGRMCSWSLDMLAQPQETM
ELVYNKSKPVAVTGMAFPTGDVNNYVVGSEEGTVYTASRHGSKAGICEMFEGHQGPVTGI
SCHSAVGTVDFSHLFITSSFDWTVKLWSTKHNKPLYSFEDNADYVYDVMWSPVHPAMFAA
VDGMGRLDLWNLNNDTEVPTASVTIEGASALNRVRWSSGGKEVAVGDSEGRVWIYDTGEL
SVAHPEDWARFARTLMEIRANRADGEEEGPMELAS
NT seq
1908 nt
NT seq
+upstream
nt +downstream
nt
atgtcggacaaaagtgacctgaaggcagagctggagcgcaaaaagcagcgcctcgcccag
atcagggaggagaagaagagaaaggaggaggagaggaagaagaaagagaagtcagacagc
cagcagaaaacagaggtgacgccagaagattcagacttggaccgcaagcgcagggagacc
gaggccctgctacagagtattggcatctcccccgaacctccgctagttcctacacctgtg
tccccctctaaatcggtgagcactcccagtgagacgggaagccaagattcagctgaggga
ggggcagcaggcagatttaggacactgcaatgggacacagacccctctgtgctgcagctg
caagctgattctgtgcttgggcgcaagatgcagaggcttggggcctctaaaatcatccag
gttgacttccttcccaaagaggttgtctcttacagcaaggagacacaaacacctgtcaac
accctcctctctgaagttgaagaggaagaggaagatgaagacatgctagaggcaaagcca
ggcccggaggccgagctgcgggatgaagacgacatcaaggagagcaaagatggttctttt
cctgttctgcgggaactgacagaagaggaaaggcaacagatcctgcactcatcagagttt
caaagttttttcgactgtagcatccgggtgatggaaagagcgctcgctgaggacagtgac
atcttattcgactacagcggccgtgaccttcaggacaaagagggagacttgggaagcggc
tctagtttgtccttcagcagactattctatgatgaacactggtccaaacatcgtgttatt
acctgtcttgactggtcccctcagtatcctgaattactggttgcatcctacaataacaat
gaagatgctccccacgaaccagatggtgttgccctggtgtggaacatcaaatttaagaag
gctacaccagagtacatctttcactgtcagtctccagtcgtagctgttggttttgctaag
tttcatccgaacttggtggtaggaggaacatattcaggacagattgttctgtgggacaac
cggagtcaccgccggaccccagtgcagaggacccccctctctgctgcagcacacactcac
ccggtatattgcgtgaacgtggtcggcacccagaatgccaacaacctgatcactgtatct
acagacgggaggatgtgttcgtggagtctcgacatgctcgctcagcctcaggagaccatg
gaacttgtgtacaacaaatccaaacctgtggcggtgacaggtatggctttccccacgggg
gatgtcaacaactatgtggtggggagcgaggaaggcaccgtgtatactgcatccagacat
ggcagtaaagcgggcatctgtgaaatgttcgagggccaccaggggccggttacgggaatc
agctgtcacagtgcagtaggcactgtagacttctcccacctctttattacatcttccttc
gactggaccgtcaaactctggagcaccaagcacaacaaaccgctgtactcttttgaggac
aatgccgactatgtgtatgacgtcatgtggtcgcccgtgcatcctgccatgttcgccgcc
gtggacggcatgggccgcctggatctgtggaacctcaacaacgacacggaggtgccaact
gccagtgtgaccattgagggagcttcggctctgaacagggttcgctggtcatcgggaggg
aaagaggtggccgtgggcgactcagaggggagagtttggatctacgacacaggagagctt
tccgtggcccaccctgaggactgggcgcgctttgctcgcacgctcatggagatccgcgct
aaccgggcggacggtgaagaggagggccctatggagctggcttcatag
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integrated database retrieval system
