Xiphophorus maculatus (southern platyfish): 102220475
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Entry
102220475 CDS
T02923
Symbol
pdgfd
Name
(RefSeq) platelet-derived growth factor D
KO
K05450
platelet derived growth factor C/D
Organism
xma
Xiphophorus maculatus (southern platyfish)
Pathway
xma04010
MAPK signaling pathway
xma04020
Calcium signaling pathway
xma04510
Focal adhesion
xma04518
Integrin signaling
xma04540
Gap junction
xma04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
102220475 (pdgfd)
04020 Calcium signaling pathway
102220475 (pdgfd)
09133 Signaling molecules and interaction
04518 Integrin signaling
102220475 (pdgfd)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
102220475 (pdgfd)
04540 Gap junction
102220475 (pdgfd)
09142 Cell motility
04810 Regulation of actin cytoskeleton
102220475 (pdgfd)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
xma04052
]
102220475 (pdgfd)
Cytokines and neuropeptides [BR:
xma04052
]
Cytokines
Growth factors (RTK binding)
102220475 (pdgfd)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CUB
PDGF
CDCP1_CUB_6
Motif
Other DBs
NCBI-GeneID:
102220475
NCBI-ProteinID:
XP_023206456
Ensembl:
ENSXMAG00000000232
LinkDB
All DBs
Position
18:complement(18573987..18640809)
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AA seq
359 aa
AA seq
DB search
MNGAMVFQMWIILLLATLSKVGKAQVANAKVLRGNSRRDDLYHKDENITVTPAGGVIFSP
NYPKAYPRNLCLSWKLLAPPGSLIHLQFDEQFHLEEPVNGKCSYDFVEVEEKSQTSIIKW
GRWCGQKAPSSLTSKSNTLRIIFNSDDYFVAKPGFKIYYSLLGDTNWEAVTELMSDMSAN
EMPVTEAPQTLEDLDRTIAAFDTVEQLLQSLSPDTWRQDLDNIYTQTYIYYRSKSYHLAS
RQNKVDLNRLHDDVKRYSCTPRNYSVNLREELKTTNAVFFPRCLLVKRCGGNCGCGTNNW
NTGCTCQPSKTTTKLHEVLKYAPETTPYQYQQRVRWVIDEIFLSHHEMCECACPLQPPR
NT seq
1080 nt
NT seq
+upstream
nt +downstream
nt
atgaatggagcgatggttttccagatgtggatcattttattgttggccactttaagcaaa
gttgggaaggctcaggtcgccaatgccaaagtgttgaggggcaacagcagaagagacgac
ttgtaccacaaggacgaaaacatcacggtgactccagcgggtggcgtcatcttcagccca
aactaccccaaagcttatccccgcaacctgtgtctgtcatggaaactgctagcaccacct
gggagcctcatccaccttcagtttgatgaacagttccacctggaggagcctgtgaatgga
aagtgcagttatgactttgttgaagtggaggaaaaatcacagaccagcattataaagtgg
ggtcgttggtgtgggcagaaggcaccctccagtctgacttcaaaatccaacacactcaga
atcatcttcaattcggacgattactttgtggcgaagcctggattcaaaatctactactca
ctgctgggtgacaccaattgggaagctgtcactgaactcatgtcggacatgagtgcaaac
gagatgccagtcacagaggctcctcagacactggaggacttggatagaaccatagctgcc
tttgacactgtagagcagcttcttcagtctttgagtccagatacttggagacaagatctg
gacaatatctacactcaaacatacatatattatagatccaagtcctatcatctggcaagc
cgacagaataaagttgatctgaatcgtctccatgacgatgtcaagcggtatagctgcaca
cctcggaactactctgtgaaccttcgggaggagctgaagaccaccaacgctgtcttcttc
cctcgatgtctgctggtgaaacgctgcggaggcaactgtggctgcgggaccaataactgg
aacaccggctgtacctgtcagccctcgaaaaccactacaaaactacacgaggtgctgaag
tatgccccagagaccactccgtaccagtaccagcagcgggtgcgctgggttattgatgaa
attttcctctcgcatcatgaaatgtgcgaatgtgcgtgtccgctgcagcctcctcgctga
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