Xiphophorus maculatus (southern platyfish): 102220538
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Entry
102220538 CDS
T02923
Name
(RefSeq) protocadherin-7-like isoform X1
KO
K16498
protocadherin delta 1
Organism
xma
Xiphophorus maculatus (southern platyfish)
Pathway
xma03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
102220538
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
xma01009
]
102220538
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
xma04515
]
102220538
Protein phosphatases and associated proteins [BR:
xma01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
102220538
Cell adhesion molecules [BR:
xma04515
]
Cadherins
Protocadherins
102220538
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Protocadherin
Cadherin_2
Motif
Other DBs
NCBI-GeneID:
102220538
NCBI-ProteinID:
XP_014326494
UniProt:
M4ACT8
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Position
5:12325187..12382946
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AA seq
1361 aa
AA seq
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MPSLGAVHSVVLLLQLLTQLPAADSALRYRVAEEGPPDVRIGNVAVDLGSNNGDVTFALE
SGSEYFKIDNVTGELTTGPRRIDREKLPQCQMIFDENECFLDFEVSVIGPLQSWVDLFEG
RVVITDINDNTPSFPSPVLQLSVEENRPIGTLYLLPTATDRDFGRNGIDRYELIQDNGAG
SSSTRRTAGGNPIARVDGLDRRGRSGDSGGGARSSVFELQVADIPDGEKQPQLIVKGTLD
REQKDSYELVLKVRDGGNPPRSSQALLRVSITDVNDNSPQFERSTYEAEMTENAPPGTPV
LQVRASDRDIGVNGQVEYVFGAATENVRRLLRLDEATGWLSVLHRIDREEVAQLKFTVMA
RDRGQPPRTDRTTVVLAVRDENDNVPVVEIRKIGRILVRDGAALVPENVLVDTPVALVQV
SDRDQGENGAVTCTVVGDVPFTLKPAGETLLPPPPADEAFDRNKKKYFLHTSALLDYEAM
KEYSVTIVAVDSGSPSLSSNSSLMVRVVDINDHAPIFAQSNVEVHFAENNGPGERVVTVV
ATDADSGKNAEIAYSLDPASNGPFYIDVDNGDIRATGILDREQRERYELRVIAKDKGTPS
LQGSATVVVQVTDRNDNAPKFVQEIFTFYVKENLLANSPVGMVTVTDADEGENAELSLFV
EVDGADGKTAGDKVEGEDSRNEREELFSIENNTGTIFSAASFDRERLSTYTFRVRAVDGG
EPRKTATATVSLFVTDENDNAPSITSPANESYTLLPPASSARTIVRTVTAIDSDTGPNAD
LRYALVGGNPFRLFEIGHTNGVITLAEPLERRHRGLHRLVVRVNDSGIPSLCATALVHVF
INESLANATLVDAQVARSLMAPLSLDIAGDPDSERALGKQRLSVAIGVLAGAAAVILVIL
LVVTARQCGAQGKNGYEAGKKEPEEDFFSPTGAQPQASRGSGSDRGRKPRRDKRGGGSGG
TAGGGGKSDRSLYSGIVTVNGLRRHVNDDDEEELSSASERLAARYCAVDGDPGSPRMGGG
RRHQSSPDLARHYKSSSPLPAVNLQPHSPPAEGKKHQAVQELPPSNTFVGSGGCVGSAGS
SSSSTGGSGNADAMSLGSDQCSDYSCQAANKYSKQGTLRRVTFSVVSQPQDGGCYDSGLE
DSETPSSKSSSGPRLGALPLPEEGYERTTPEGSVGEEEHVENDARQLPDVALTGKCTREC
DEFGHSDTCWMPVRPSPRQRQRHGSDPPRLSTFAPGDDNNNLRGNDRESDSESAGSAGSS
EPGVVVGGEGQRLPLANGDPLGTLGRGDRNRNMGDHNRNLLNRKMTSASYDTFSGAGLGR
RQPEEEAGEGQNPPEVIPLARTGGDYKTTSCLTLSRREVYL
NT seq
4086 nt
NT seq
+upstream
nt +downstream
nt
atgccgagccttggtgcagtgcactctgtggtgttgctgctgcagctgctgactcagcta
ccggctgccgactcagctctccggtaccgggtggcggaggagggcccgccggatgtgagg
ataggcaacgtggccgtcgatctgggctctaacaacggagacgtcacctttgccctggag
agtggctcagagtacttcaagatcgacaacgtgacaggtgagcttactacaggcccaagg
cgcatagaccgagagaagctcccacagtgccagatgatcttcgatgagaatgagtgtttc
ttggactttgaggtgtcagttataggaccactgcagagctgggtagacctcttcgaaggt
cgagttgtcatcacagacatcaatgacaacacgccctccttcccctcacctgtcctgcag
ctctcagttgaggagaaccgccccattgggactctgtacctgcttcccacagccacagac
agggactttggacggaatggcattgaccgctatgaacttatccaagataatggagccggg
tcaagttcaacgaggcgcacagcaggaggaaaccccattgctagagtggatggactagac
cgcaggggcagaagtggtgatagtggaggaggagcgaggagcagtgtgtttgagctgcaa
gtagcagacataccagatggtgagaagcagcctcagctcattgtgaagggcacattggat
cgagagcagaaggactcatatgagcttgtcctcaaagttcgagatggagggaacccacca
cgttcctcccaagctctgctccgggtttctataactgatgtgaatgataacagtccacaa
tttgagaggtccacgtatgaagctgagatgactgaaaatgctcctccaggcacacctgtt
ctccaagtcagagcctctgaccgggacattggagtaaatgggcaggtggagtacgtcttt
ggagctgccacggaaaatgtcaggcgactcctgcggctggatgaggcaactggttggttg
agcgttcttcacaggattgacagggaagaggtggcccagctgaagttcacagtgatggcc
agggaccggggtcagcctccacggaccgatcgtaccacggtagttttggccgttcgggat
gaaaatgacaatgttccagttgtggagatcagaaagatcggacggatccttgtacgggat
ggggctgcgctggtgccagagaacgttctggtggacacgcctgtcgctctagttcaggtg
tcagatcgagaccagggagagaatggggcggtgacctgcactgtggtaggagatgtccca
ttcactctgaaaccagcaggcgagacactactcccacccccacctgcagatgaagccttt
gacagaaacaagaaaaaatatttcttacatacttcagccttgctggactacgaggccatg
aaagagtacagtgtaaccattgtggcagtagattctggcagccccagtctatccagtaac
agttccttgatggtgcgggtggtagacatcaatgatcatgctccaatctttgcccagagc
aatgtggaggtccactttgccgagaacaatggacctggtgaaagggtggtcactgtagta
gccacagatgcagacagtggcaaaaatgctgaaattgcatattccttggatcctgcctct
aacggacctttttacatagatgtagataatggagatatccgagctacggggattcttgac
cgtgagcaaagagagaggtatgagttgcgagtaattgcaaaggacaaaggaacaccctct
ctgcaaggctctgcaaccgttgttgtacaagtgactgatcgtaatgacaatgcaccaaag
tttgttcaagaaatcttcacgttctatgtaaaggagaacctgctcgccaacagtccagtc
ggcatggttacagtgaccgatgcagacgaaggtgagaatgcggagctcagcctgttcgta
gaggtagacggggcagatggaaagacggcgggcgacaaggtggagggagaagatagcagg
aatgagcgagaagagttattctccattgagaacaacaccggaacaatcttttctgctgca
tcctttgaccgtgaaaggctttccacgtacaccttccgtgttcgggctgtggatggaggg
gaacctcggaaaactgccactgccacagtctcgctttttgtgacagatgaaaatgacaat
gcgccttcgattacatctcccgccaatgagtcctacactctcctaccacctgccagcagt
gctcgcaccattgtcaggactgtaacggccatagactcagacactgggccaaacgctgac
cttcgctatgcattagtggggggaaatccattcagactatttgagattggccacaccaat
ggagttatcactctagcagagcctctggagcggcgccacagaggtcttcatcgtctggtt
gtacgagtcaacgacagtggcatcccttcgctttgtgccaccgcactggttcacgtcttc
atcaatgagagcttggcgaatgccaccctagtggatgcacaggttgcccgtagcctgatg
gccccactatctttagacattgccggggacccagacagtgaacgtgcgttgggaaaacag
cgcctcagcgttgccattggcgtcctagcgggagcagcagcagttatcctggtgattctt
cttgtggtcacagccaggcagtgtggcgcgcagggcaagaatggctacgaggctggaaag
aaggagccagaggaagacttcttcagtccgacgggggctcaaccacaagccagccgaggc
agtggatccgaccgtggtcgcaaaccgcggcgagataaacgtggcggaggcagtggaggc
acagctggaggtggagggaaatcggacagatctctatacagtggcatcgtcacagtcaac
ggcctgcgtcgtcacgtcaacgatgatgatgaggaggaacttagcagtgctagtgagcgc
ctagcagcccgctactgtgctgtggatggtgaccctggcagcccacgaatgggcggtgga
agacgacaccagtcaagccccgatctggctaggcactacaaatccagctcacctctccct
gcagtgaatctccagcctcactcgcccccggcagagggaaagaagcaccaggcggtccag
gagctgcctccctccaatacctttgtgggcagcggcgggtgtgtggggagtgccggctcc
agtagcagcagtactggaggaagtggcaacgcagatgccatgtccctgggatcggaccag
tgttctgattacagctgccaggctgcaaacaagtacagcaaacaggggacccttcgccgg
gtgaccttctcggtcgtgagccaacctcaggacggtggttgctatgacagtggcctggaa
gactcagagacaccaagcagcaagagttcatcaggaccacggctgggagctctgccactt
cctgaagaaggctacgagcgcacaacgccggagggcagcgtgggggaggaggagcacgta
gagaacgatgctagacagcttccagacgtagcactaactggaaagtgcaccagggagtgc
gatgagttcggccactctgacacatgctggatgcctgtccgcccttcgccacggcaaagg
cagcggcacggtagcgaccctccacgcctctctacctttgctccaggtgacgacaacaac
aatctccgtggcaacgaccgtgaaagcgacagcgagagtgccggcagcgcagggagctca
gagcctggagtcgtggtcggaggagaaggtcaaaggctacccctagccaacggggacccc
ctcggcaccctgggccgtggagaccgcaacagaaacatgggcgaccacaaccggaatctt
cttaaccgcaaaatgacttccgcatcctacgacacgttcagcggtgcgggccttgggagg
cgccagcctgaggaggaggcaggcgagggccaaaacccaccagaggtcataccactggcg
cggactggaggggactacaagacaacctcatgcctcacgttgtcacgccgagaagtctat
ctgtaa
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