Xiphophorus maculatus (southern platyfish): 102220579
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Entry
102220579 CDS
T02923
Symbol
tspear
Name
(RefSeq) thrombospondin-type laminin G domain and EAR repeat-containing protein
KO
K24437
thrombospondin-type laminin G domain and EAR repeat-containing protein
Organism
xma
Xiphophorus maculatus (southern platyfish)
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
xma03037
]
102220579 (tspear)
04990 Domain-containing proteins not elsewhere classified [BR:
xma04990
]
102220579 (tspear)
Cilium and associated proteins [BR:
xma03037
]
Other cilia and associated proteins
Stereociliary proteins
102220579 (tspear)
Domain-containing proteins not elsewhere classified [BR:
xma04990
]
Thrombospondin domain-containing proteins
Other thrombospondin domain-containing proteins
102220579 (tspear)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EPTP
Laminin_G_2
Laminin_G_1
TS_C
Motif
Other DBs
NCBI-GeneID:
102220579
NCBI-ProteinID:
XP_023192929
Ensembl:
ENSXMAG00000007458
LinkDB
All DBs
Position
7:27301528..27313068
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AA seq
614 aa
AA seq
DB search
MVQSRGSRGIRLTGTVPTALSFTASQIFTNCDYFPSEFSLVATMKIQRLRKKTNQYIFSV
MKEGSESLLLGLRVSENRLHLLTSPPGGGGRRRISFKNVRLDDNRWHTVVLAVTGPYATL
TVDCGPPVEIKQVRTFPSTLNTRGSMFIIGSRGHWRGRFSGLLRQLVLLPGSDATPRLCP
NSEPSLAELSVPQVLKTSPLQPDQKGSVYPYEAEARVTAGDRPPCSGPEKGQLWFNVRKK
GLFICDGMMWRTLMQDKERLDYVEDYQDLYTRSETLDVELFSIPSEGLFMAAANRDSRPG
SGIYKWINGSFQLYQNASTQEAQAWKYFTIDDKVFLVVADMQKTEPELSTIYRWNRRQKR
FLRYQTLETHSARDWEAFQIHNNSFLVVANHMRDSNHNIHSVIYRWNPDTKLFEVNQTLS
TSGAYDWEFFTIGPYHFLVVANTFNGQNTTISSTIYVWLDGCFRSYQNITTVGATDWETF
QIDGRFFLAVANSQRFSRKSQSTYNINSTVYELNMFTQTFLRFQDIPTHSALDWEFFTIG
DEKFLVVANSYDGSSYSVNSVVYRWQGYEGFVPVHSLPTFGCRDWEHFTTEQGSFLIYSS
ATSRLSKIFRLRTY
NT seq
1845 nt
NT seq
+upstream
nt +downstream
nt
atggttcagtccagagggtccagaggtatcaggctaaccggcaccgtaccgactgctctg
agttttaccgcctcacagatattcaccaactgtgactattttccttctgagttctcactg
gttgccaccatgaagatacagagactgaggaagaagacgaatcagtacatcttctctgtg
atgaaggagggatctgagtcattgctgctggggctgcgtgtctctgagaaccgtcttcac
cttctgacgtcgccccctggtggtggagggcggagaaggatcagttttaaaaatgtcaga
ttggacgacaacagatggcacactgtggttctggctgtgaccggtccttacgccacattg
accgttgactgtggaccacctgtggaaattaagcaggtccggaccttccccagtactctg
aacaccagagggtccatgttcatcattggcagcaggggccactggaggggccgcttctct
ggtctacttcgtcagctggttcttcttccaggctcagacgcgacgcccagactttgtccc
aactctgaacccagtctggcagagctctctgtcccgcaggtcctcaagacctccccgctc
caaccggaccagaagggctcagtttatccatacgaggccgaggccagagtgactgcaggc
gatcgtcctccatgttcaggcccagagaaaggtcagctgtggttcaacgttcggaagaaa
ggtctgttcatctgtgacgggatgatgtggaggacgctcatgcaggataaagagcgtctg
gactatgtggaggactaccaggacctctacacccgctcagaaaccttggatgtggagctc
ttctccatcccgtctgaaggcctgttcatggctgcagccaatagggattcccgacccggt
tctggtatttacaaatggattaatgggtcattccagctatatcagaacgccagcactcag
gaagctcaagcctggaaatatttcaccatcgatgacaaggttttcctggtggtggcggac
atgcagaagacagaacctgagctgtcgaccatctaccggtggaatcgtcggcagaaacgt
ttccttcgctatcagactctggagacccactctgctcgggactgggaggcctttcagatc
cacaacaacagcttcctggtggtggccaatcacatgcgagactccaaccataacatccac
agtgtgatctacaggtggaaccctgacacaaagctgtttgaggtgaaccagactctgtcc
acgtctggagcctatgactgggagttcttcaccatcggcccgtatcatttcctggtggtg
gcgaacaccttcaacggtcagaacaccaccatcagctccaccatctacgtctggttggac
gggtgtttccggagctaccagaacatcacgacggttggagcgacggattgggagacgttc
cagatcgacggcaggttcttcctcgccgttgccaacagtcagcggttctccaggaaatcc
cagagtacctacaacatcaactccaccgtgtacgagctgaacatgttcacccagaccttc
ctccgcttccaggacatcccgactcacagcgctcttgactgggagttcttcaccatcgga
gacgagaagttcctggttgtggcgaactcttatgatggcagttcgtactccgtgaacagc
gtcgtctacaggtggcagggctacgagggcttcgtcccggtccacagtcttcccaccttt
ggttgcagagactgggaacacttcaccactgagcagggctccttcctcatctactccagc
gccacctccaggctcagcaagattttcagactcagaacgtactga
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