Xiphophorus maculatus (southern platyfish): 102220785
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Entry
102220785 CDS
T02923
Symbol
hcfc1
Name
(RefSeq) host cell factor 1
KO
K14966
host cell factor 1
Organism
xma
Xiphophorus maculatus (southern platyfish)
Pathway
xma03083
Polycomb repressive complex
xma04980
Cobalamin transport and metabolism
xma05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
102220785 (hcfc1)
09150 Organismal Systems
09154 Digestive system
04980 Cobalamin transport and metabolism
102220785 (hcfc1)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
102220785 (hcfc1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
xma01009
]
102220785 (hcfc1)
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
xma03036
]
102220785 (hcfc1)
03029 Mitochondrial biogenesis [BR:
xma03029
]
102220785 (hcfc1)
Protein phosphatases and associated proteins [BR:
xma01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
102220785 (hcfc1)
Chromosome and associated proteins [BR:
xma03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
NSL complex
102220785 (hcfc1)
HMT complexes
COMPASS/SET1 complex
102220785 (hcfc1)
MLL-HCF complex
102220785 (hcfc1)
Polycomb repressive complex (PRC) and associated proteins
PR-DUB complex
102220785 (hcfc1)
Mitochondrial biogenesis [BR:
xma03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
102220785 (hcfc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Kelch_KLHDC2_KLHL20_DRC7
Beta-prop_ATRN-LZTR1
Kelch_3
Kelch_5
Kelch_4
Kelch_1
fn3
Motif
Other DBs
NCBI-GeneID:
102220785
NCBI-ProteinID:
XP_014324868
Ensembl:
ENSXMAG00000009558
UniProt:
M4A542
LinkDB
All DBs
Position
20:26099471..26116132
Genome browser
AA seq
1711 aa
AA seq
DB search
MSAPGSAVSGTTPSVLQPRWKRVLGWSGPVPRPRHGHRAVAIKELMVVFGGGNEGIVDEL
HVYNTATNQWFIPAVRGDIPPGCAAYGFVCDGTRLLVFGGMVEYGKYSNDLYELQASRWE
WKKLKAKNPKNGPPPCPRLGHSFSLVGNKCYLFGGLANDSEDPKNNIPRYLNDLYTLELR
PGSSVVGWDIPITYGVLPPPRESHTAVVYTEKMTRKSRLIIYGGMSGCRLGDLWTLDIDT
LTWNKPSVGGTAPLPRSLHSATTITNKMYVFGGWVPLVMDDVKVATHEKEWKCTNTLACL
NLDSMCWETVLMDTLEDNIPRARAGHCAVAINSRLYVWSGRDGYRKAWNNQVCCKDLWYL
ETERPHAPARVQLVRANTNSLEVSWGAVSTADTYLLQLQKYDIPATPAVASPATSATPSQ
PVNSPKSPALAAAAPSAQSLQQTAVLKVAAQQAATGASVVTVRPSQPGKSPVTVTSLPPG
VRMVVPTQTTQGSPIGSSPQMSGMAALAAAAAATQKIPPSSGGTVLNVPAGATILKTVAV
SPGTTTVKVASPVMVSNPATRMLKTAAAQVGTATASSPTTTRPIITVHKSGAVTVAQQAQ
VVTTVVGGVTKTITLVKSPLTMGSSGTLISNLGKMMSVVQTKPVQTSAVTGQASTNPLTQ
IIQTKGPLPAGTILKLVTSADGKPTTIITTSQAGVTGNKPTILNISGVSPTTTKQGTTII
KTIPMSAIMTQPGATGVTSSAGMKTPITILTTKVMTTGTPGKIITAVPKLSTAAGQQGLT
QVVLKGAPGQPGTILRTLPMSTVGGVRLVTPVTVSSVKPTVTTLVVKGTTGVTTLGTVTG
TVSTSLAGATADSSSASLVTPITTLANIATLSSQVINTGAITVSAAQTSLTSTSTLPSST
MTVQNQPTQVTLITTPSGVEAQPVQDLPVSILASPTSEQPSSTEAGATGDGSGTVTLVCS
NPPCETHDTGTTNTATTSSATIGAGQVCSNPPCETHETGTTNTATTSSATIGAGQVCSNP
PCETHETGTTNTATTASSNMSTLRMCSNPPCETHETGTTNTATTATSNMGGTQQVCSNPP
CETHVTGTTNTATQASSSMNAGETDTVQSSQSNPPSETHESGTSVSPSASTSSVGEDQSS
TATGQIQRVCSNPPYETHETGTTNTATTATCNMETGEGTAAQQTEEGAEGTSTTEEAATT
AATSVATTTQGRAITTVTQSTPAPGPSVPSISSITEGVSTAASSTEEPMQTEEPASAEAA
PAEEPAAAMETQAEGEAATATALNLPSELMSEAQGTTLMVTGLSDEELAVTAAAEAAAQA
AATEEAQALAIQAVLQAAQQAVLNEGDGSGESQQPTNIPIMLTQQELAALVQQQQQLQEA
QAAAQQASVDTSMPTEGLAPADSLNDPSVESNGHNEMAASVTSAVASLLPRTTAETLAPS
STFAASISVASPAKLQAAATLAEVANGIEGEKQAPQPAPVKPVVKKENQWFDVGIVKVTN
MVVTHFHVPGDDSQGDDDSGAVPDYGQMKKMELQPGTAYKFRVAGINACGRGTFSEISAF
KTCLPGFPGAPCAIKISKSPDGAHLTWEPPSVTSGKIIEYSVYLAIQSSQTAEAKASTPA
QLAFMRVYCGPNPSCLVQSSSLSNAHIDYTTKPAIIFRIAARNEKGYGPATQVRWLQESG
KDATSAKPAPKRPGTSPDTKTTGPKKARTDQ
NT seq
5136 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcccctggttccgcggtgtctgggaccactccgtcggttctgcagccgcgatgg
aagcgggtcctcggatggtccggtccggtccctcggcccaggcacggacacagagctgtg
gctataaaggaactgatggttgtttttggaggtggaaacgaaggaattgttgacgaatta
catgtatacaacacagcgacaaaccagtggtttatcccagcagtccgtggtgatatccct
ccaggttgtgctgcatatggttttgtatgtgatggaacacggttgctggtttttggtggg
atggtggaatatgggaaatacagcaatgatctctatgaactacaggccagcagatgggaa
tggaaaaaactgaaagccaaaaatccaaaaaacggcccaccgccttgtcctcgactcggc
cacagcttttcgctcgttggcaacaaatgctacttgtttggtggactggccaatgatagt
gaagaccccaaaaacaacattccccgatacctaaatgatttgtacacactcgagcttcgt
cctggttctagcgtggtcgggtgggatattccaatcacgtatggcgtcctgcctccgcct
cgtgaaagtcacaccgctgtggtgtacacagaaaagatgaccaggaagtcacgcttgata
atctatggaggaatgagcggttgtcgccttggagatctgtggacgcttgacatagatacc
ctgacttggaacaaaccttcagtaggcggtacggcacctcttccacgaagtcttcactct
gccaccacaatcacaaacaagatgtacgtttttggcggatgggttcctttggtaatggat
gacgtcaaagtggccacgcatgagaaagaatggaaatgcacaaacacactcgcttgccta
aatctcgactccatgtgttgggaaacagtgttgatggataccctggaggataacatcccc
agggcccgtgctggccactgtgccgtggccatcaattccagactgtatgtctggagcggt
cgtgacggttatcggaaagcgtggaacaaccaagtgtgctgtaaagacctttggtacctg
gaaacagagcggccccacgctcccgccagggtccagttagtccgtgccaacacaaactct
ctggaggtgagctggggtgcagtgtccaccgccgacacgtacctgctgcagctgcagaag
tatgacatccccgcgaccccggcggtagcctcgccagccacgagtgcaacgccttcgcaa
cctgtcaactctccaaagagccctgcactggctgctgcagcaccctccgcgcagagttta
caacagacagctgttttaaaggttgcagctcagcaggctgccacaggcgcatctgttgtc
acagttcgcccgagccagccagggaaatcccccgtcaccgtgacgtcccttcccccaggt
gttcgaatggtagtgcctacccaaaccacccaaggatcgccaattggaagcagccctcag
atgagtggcatggcagctttagctgctgcagctgcagccacacagaagatcccaccctct
tcaggaggcaccgttctcaatgttcctgcgggtgccaccatcctcaaaacagtggctgtc
tccccaggcaccaccacagtgaaagtggcttctcctgtaatggtcagtaacccagccacc
cgcatgctgaagacggccgcggcccaggtgggcacggcaaccgcgtcctctcccaccacc
accagaccgatcatcactgtgcacaagtccggggctgtcacagtggctcagcaggcccag
gtggtcaccactgtggtgggaggagtcaccaagaccatcacactggtcaagagtcctctc
accatgggcagcagcggtactttgatctccaaccttggcaagatgatgtctgtggtgcaa
accaagccagtgcagacgtcagctgtcacaggccaggcttccactaaccctctcacacag
atcatacagacaaagggtcccctcccagccggcaccatcctgaaactggtgacttctgca
gacggcaagcccacaacaatcatcacaacgtcccaggccggagtcacaggaaacaagccc
acgatcctcaacataagtggcgtctcacctactactaccaagcagggaaccaccatcatt
aaaaccatccccatgtcggccatcatgacccagcctggagccacaggcgtgacgagcagt
gcaggcatgaaaacaccaataacgatccttaccaccaaggtaatgaccactggaacgcct
ggtaaaattattactgctgtgcccaaactgtccactgcagctggacagcagggactgacg
caggtggtattaaagggcgctccaggacagccgggcactattttgcgtaccttgcccatg
agcacagtaggcggtgttcgtctcgttacgccagtgacggtctcctctgttaagcccacg
gttactacgctggttgtcaagggaactactggagtcaccactcttggcacagtcactggg
acggtgtccacaagcttggcaggagccacggctgacagctccagtgcctccctggtgacg
ccgatcaccacgctggcgaacatcgctacactgtccagccaggtgatcaacacaggcgcc
atcacggtctcggctgctcagaccagtctgacttctacttcgactctgccctcctctaca
atgacagtgcagaaccagcccacccaggttaccctgatcacaacccccagtggtgttgaa
gcccagccagtccaggatcttcctgtgtccattctggcttctccgacctctgaacagccc
agctccactgaggcaggagcaactggagacggttctggtaccgtcaccctggtctgctcc
aacccgccctgcgagacccacgatacaggaactaccaacactgccaccacttcctccgct
acaatcggagccggacaggtctgctccaacccgccctgcgagacccacgagacaggaacc
accaacacggcaacgacttcctctgctacaatcggagccggacaggtctgctccaacccg
ccctgcgagacccacgagactggaaccaccaacacggccacgacggcgtcttcgaacatg
tctacattacgcatgtgctccaacccgccctgcgagacccatgaaacggggacgacaaac
acggccacaacagcgacctccaacatgggagggacccaacaggtgtgttcaaatcccccc
tgcgagacccacgtgacgggcaccaccaacacagcaacacaagcttcctccagcatgaac
gccggcgagacggacaccgtgcagagctctcagtcaaatccacccagcgaaactcacgaa
tcagggaccagcgtcagtccgtccgcatccacctccagcgtaggggaggaccagagcagc
acagcaacgggccagatccagagggtctgctccaacccgccgtatgaaacgcatgagact
gggaccaccaacaccgccactactgctacctgcaacatggagaccggtgaaggcacagcc
gcccagcagacagaggaaggagcagaaggaacaagcaccacagaggaagctgctaccact
gcagctactagcgtagctacaaccacccaaggcagagccatcaccacggtcactcagtcc
acaccggcccctgggccctcagtaccgtcaatttcctcaatcacagaaggagtaagcact
gcagccagcagcacggaggagccgatgcagactgaagaacctgcatcagcagaagctgca
cctgctgaggagcctgctgccgccatggagacacaagcagaaggagaagcagctactgca
acggcgttgaacctgccctcggagctgatgtctgaggcccaggggaccacgctgatggtg
acggggctgtcggacgaagagctggccgtgaccgccgccgccgaggctgctgcccaggct
gcagccacagaggaggcccaggccctcgccatccaggctgtcctgcaggcagcgcagcaa
gccgtattgaatgaaggcgacggttctggggaaagccagcagcccaccaacatccccatc
atgctaacccagcaggagctagccgcactggttcagcagcagcagcaactacaggaagca
caggccgccgcgcagcaggcctccgtggacaccagcatgcctaccgagggcctcgccccc
gccgacagcctcaacgacccgtcagtcgaaagcaatgggcacaacgaaatggctgcctcg
gtcaccagcgccgtggcatcccttctaccacgtaccactgctgagactctggctccatca
agtacgtttgcggcgtctatatcagtagcaagtccggccaagctgcaggcggcagccact
ctcgcagaggtggccaatggcatcgagggagagaaacaagcccctcagcccgctccagtg
aagcctgttgttaaaaaggagaaccagtggtttgatgtcgggatcgtaaaagtgacgaat
atggtcgtcactcacttccatgtgccaggggacgattctcaaggagatgacgactctggc
gccgtaccggactacggtcagatgaagaagatggagctgcagcccggcacggcgtacaag
ttccgcgtggcggggatcaacgcctgcgggcgtggaacgttctctgagatttctgctttc
aagacctgcctacccggattcccaggagccccgtgtgccatcaaaattagcaagagccca
gatggcgcccacctgacctgggagccgccttcggtcacgtcagggaaaatcatagagtac
tctgtgtacctggccatccagagcagccagacggctgaggccaaggcctccaccccggcc
cagctagccttcatgcgagtgtactgcggacccaacccctcgtgcttggtgcagtcgtcc
agcctctcaaacgctcacatcgactacacgactaaaccagccatcatcttccgcatcgct
gcccgcaacgagaagggctacggtcccgccactcaagttcgatggctacaggaatctggt
aaagacgccacttctgcaaaacctgcccccaaaagacccggcacctctcctgataccaag
actactggtccaaagaaagcaaggacggaccagtga
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