Xiphophorus maculatus (southern platyfish): 102220804
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Entry
102220804 CDS
T02923
Symbol
khsrp
Name
(RefSeq) far upstream element-binding protein 2
KO
K13210
far upstream element-binding protein
Organism
xma
Xiphophorus maculatus (southern platyfish)
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xma03019
]
102220804 (khsrp)
03041 Spliceosome [BR:
xma03041
]
102220804 (khsrp)
Messenger RNA biogenesis [BR:
xma03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
102220804 (khsrp)
Spliceosome [BR:
xma03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
102220804 (khsrp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
KH_2
KH-I_KHDC4-BBP
FUBP_C
KH_KhpA-B
KH_Vigilin
Motif
Other DBs
NCBI-GeneID:
102220804
NCBI-ProteinID:
XP_023188826
UniProt:
M4AEL9
LinkDB
All DBs
Position
5:21807995..21818797
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AA seq
647 aa
AA seq
DB search
MSDYGGVSSNGVGTGVKKDAFADAVQRARQIAAKIGGETVPQVTNNGGAESYPFSAQKRS
LEEGDEPDAKKLASQSERDSAMSIGAQLAALSQQSVRSSTITEEYKVPDSMVGLIIGRGG
EQINKIQHDSGCKVQIAHDSVGLPERSISLTGSPEAVQRARAFLEDIVSRGHDSSNGQSG
SMQEIIIPAGKAGLIIGKGGETIKQLQERAGVKMILVQDGSQPPNIDKPLRIIGDPYKVQ
QAKEMVNEILRERDHAGFGERNEYGSRMGGGGIDIAVPRQSVGVVIGRSGEMIKKIQSDA
GVKIQFKPDDGTGPDKIAHIMGPPDQCQHAASIITELLQSIRARDEGGQGGPPGPGMSSG
GRSRGGGQGNWGPSGGEVTFSIPAHKCGLVIGRGGENIKSINQQTGAFVEISRQMPPNGD
PNYKLFIIRGSPQEIDHAKQLIEEKIEGPLCPVGGGPGSGGPGGPMGPYNPNPYNAGPPG
GAPHGAPGGPQYCSQGWGNPYQQWQAPNSHDPNKAAADPNAAWAAYYAQYYGQQPGAAMA
PQAPGAPAGAGDQGQGAQTCGGQPDYTKAWEEYYKKMGMTQPGGGAAATPGSAPAAAAAA
PGGADAGGQQDYSAAWAEYYRQQAAYYGQAGQAPGQAGGPQPGQQPQ
NT seq
1944 nt
NT seq
+upstream
nt +downstream
nt
atgtcggattacggcggagtctcctctaacggtgttggcactggggtgaaaaaagacgcc
tttgcagacgccgttcaacgagccagacagatcgcagctaaaatcggtggagagactgtg
ccccaagtgacaaacaacggaggagctgaaagttatccgttctctgcacagaaacgatcc
cttgaagaaggagatgagcccgatgctaagaagttagcatcacagagtgaaagagattca
gcaatgtctattggagctcagttagctgctctgtcccaacaaagtgtcaggtcctccact
attacagaagagtacaaggttcctgacagcatggttggcctcatcattggacggggaggg
gaacagatcaacaaaatacagcacgactctggctgcaaggtccagattgcgcatgacagc
gtcggtcttccagaaagaagcatttccctgactggatcaccagaggcagtacagagggcc
agggcttttctagaggacattgtgtccagaggtcatgattcaagtaacggtcagtccggc
tccatgcaagagatcatcattcctgcaggaaaggccggcctaattattggtaaaggagga
gagacgatcaaacagctccaggagcgagctggagttaaaatgattcttgttcaggacgga
tcacagccaccaaacatagacaaacccctgcgcatcatcggagacccttacaaagtgcag
caagcaaaggagatggtgaatgagattctacgagaacgggatcacgctgggtttggagaa
aggaatgaatacggctcaaggatgggagggggcggcattgatatagctgtaccgcgacag
tctgtaggagttgtgatcggtcgcagtggggagatgataaaaaaaatccagagcgatgct
ggtgtgaagatccagtttaaaccagatgacggtacaggccctgataagattgcacacatc
atgggccctccggaccagtgtcagcacgctgcttccattatcactgagctgctgcagagc
atccgtgcccgagatgaaggcgggcaggggggccctccaggtcccggtatgtcgtcggga
ggccgaagtcgtggtggaggtcagggcaactggggtccttcaggaggagaggtgaccttc
tctattcccgcgcacaaatgtgggctcgtcattggcagaggaggagagaacatcaagtcc
atcaaccagcaaaccggggcgtttgtggagatttcccgccaaatgccgccaaatggcgac
ccaaactacaaactgtttatcatcagaggctcccctcaggagattgaccacgccaagcag
ctcatagaagaaaagattgagggtcctttgtgtccagtagggggtggtcccggttctgga
ggtccaggtgggccaatgggcccctataacccaaatccctataatgcagggcctcctggt
ggagcgccgcatggagctcctgggggtccccagtattgttctcaaggttggggaaatcct
taccaacagtggcaagctccaaattcacatgaccccaacaaagcagctgcagatccaaac
gcagcatgggcagcatactatgctcaatattatgggcagcagccaggggccgccatggcc
ccccaggcaccaggtgcccctgcaggagcaggggaccagggccaaggagctcagacttgt
gggggccagcctgactatacgaaagcctgggaggaatattataagaagatgggcatgact
caaccaggtggaggagcagcagccactccaggctcagcaccagccgctgcagctgcagca
ccaggtggcgctgacgctggtggacagcaggactacagtgcagcctgggctgagtactac
agacagcaggctgcctactatggacaggcaggacaagctcccggacaggcaggtggtcca
cagccgggacagcagccccagtaa
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