Xiphophorus maculatus (southern platyfish): 102220839
Help
Entry
102220839 CDS
T02923
Name
(RefSeq) eukaryotic peptide chain release factor GTP-binding subunit ERF3A isoform X1
KO
K03267
peptide chain release factor subunit 3
Organism
xma
Xiphophorus maculatus (southern platyfish)
Pathway
xma03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
102220839
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xma03019
]
102220839
03012 Translation factors [BR:
xma03012
]
102220839
Messenger RNA biogenesis [BR:
xma03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
102220839
Translation factors [BR:
xma03012
]
Eukaryotic type
Release factors
102220839
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
PAM2
MMR_HSR1
Motif
Other DBs
NCBI-GeneID:
102220839
NCBI-ProteinID:
XP_023205134
Ensembl:
ENSXMAG00000007284
UniProt:
A0A3B5PU31
LinkDB
All DBs
Position
16:24018223..24034019
Genome browser
AA seq
578 aa
AA seq
DB search
MDPRDTAPDSWEQEDDVEQEATVDGQLEAAFTTLNVNAKPFVPNVNAAEFVPPFAMRAPT
ENVDAAVVNDKVSTMDLSESSVPVENGDTEMTSEEPWDQKDDEATEEEPGGGDRGPGESA
SPEDTAPEMMEEEEEVLVPKVPAVQPDAPKKEHINVVFIGHVDAGKSTIGGQIMYLTGMV
DKRTLEKYEREAKEKNRETWYLSWALDTNQEERDKGKTVEVGRAYFETDKKHFTILDAPG
HKSFVPNMIGGASQADLAVLVISARKGEFETGFEKGGQTREHAMLAKTAGVKHLIVLVNK
MDDPTVNWSLERYEECKEKLVPFLKKVGFNPKKDIHFMPCSGLTGANLKEATDMCPWYTG
LPFIPHLDSLPNFNRSSDGPVRLPIVDKYKDMGTVVLGKLESGSISKAQQLVMMPNRHVV
EVLSLLSDDVETDDAGPGENLKLRLKGIEEEEILPGFILCNSDSLCHSGRTFDAQIVIIE
HKSIICPGYNAVLHIHTCIEEVQITALICLVDKKTGDKSKTRPRFVKQDQVCIARLRTAG
TICLETFKDFPQMGRFTLRDEGKTIAIGKVLKLVAERD
NT seq
1737 nt
NT seq
+upstream
nt +downstream
nt
atggacccgagagacactgcccctgattcctgggaacaagaggacgatgtggaacaagag
gccacagtcgacggacagcttgaagcggcattcacaacccttaatgtgaacgctaagccg
ttcgtacccaatgtgaacgcagctgaatttgttccgccttttgccatgagagcgcccaca
gagaacgtcgatgctgctgttgtgaatgataaagtctccaccatggacctgtcagaaagc
agtgtgcctgtggagaacggtgacacagaaatgacgtcggaggaaccatgggaccaaaaa
gacgacgaagcgaccgaagaggagccgggaggtggggaccgggggccgggggagtcggcc
tcgccggaggacacggctccagagatgatggaggaggaggaggaggtgttagtgccaaag
gttccagctgtacagccagacgcccccaagaaggaacacatcaatgtggtgttcatcgga
cacgtagatgctggaaaatccaccattggaggacaaattatgtatctaacaggcatggtg
gacaagaggaccttagagaagtacgagagggaagccaaggagaagaacagagaaacctgg
tatctgtcctgggctttggacaccaatcaagaggagcgggacaaggggaagactgtggag
gtgggccgagcgtactttgagacggacaaaaagcactttactatcctagacgctccaggc
cacaaaagctttgtgccgaacatgattggaggcgcgtcccaggctgacctggctgttctg
gtgatctctgccaggaaaggtgagtttgagactggtttcgagaagggtggacagacccgg
gagcacgccatgctagctaagacggccggtgtcaagcacctgatagtcctggtcaacaag
atggatgaccctacagtcaactggagtctggagaggtatgaagagtgcaaggagaaatta
gtgccattcttgaagaaagtgggctttaacccaaagaaagacatccacttcatgccgtgt
tctgggctcaccggagccaacctgaaggaggcgactgacatgtgcccctggtatacaggt
ttgcccttcatcccacacttggacagtttgccaaatttcaacagatctagtgatggacca
gtcagattgcccattgtagacaaatacaaggacatggggactgtggtactgggaaagctg
gagtctggctccatcagtaaagcacaacagctagtcatgatgcccaacaggcatgtggtg
gaggtattgagtctgctatcggatgacgtggagacggacgatgcaggacctggtgaaaac
ctcaagctgcgactgaagggaatcgaggaggaggagatcctgccgggatttattctgtgc
aactctgacagtctctgtcattcagggcgcaccttcgacgcccagatcgtcatcatcgaa
cacaaatccatcatctgtccaggttacaatgcagtccttcacattcacacatgcattgaa
gaagtgcaaatcacggccttgatctgtctagtggacaaaaagacaggagacaagagtaag
acgcggccccggttcgtcaaacaggaccaggtctgcattgcccgtctgcgtacagctggg
accatttgcctcgagacttttaaagactttcctcagatgggacggttcactttacgggat
gaaggtaagaccatcgccatcggtaaggttctgaagctggtggctgagcgggactga
DBGET
integrated database retrieval system
