Xiphophorus maculatus (southern platyfish): 102220909
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Entry
102220909 CDS
T02923
Name
(RefSeq) spectrin beta chain, non-erythrocytic 4-like isoform X1
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
xma
Xiphophorus maculatus (southern platyfish)
Pathway
xma04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
102220909
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
xma04812
]
102220909
Cytoskeleton proteins [BR:
xma04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
102220909
Intermediate filaments
Intermediate filament-binding proteins
102220909
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spectrin
PH
PH_9
PH_11
Motif
Other DBs
NCBI-GeneID:
102220909
NCBI-ProteinID:
XP_023198436
LinkDB
All DBs
Position
11:28372940..28405401
Genome browser
AA seq
1590 aa
AA seq
DB search
MKEADRRRENSLLPQTSLLVHLSRAERLGQQVEEKMLMARDTARDEAQKLHRKWLKHQAF
MAELARNKEWLAKIEQEGLELIQEKPELRPVVQQKLEEIRECWSDLETTTKAKARQLFEN
NKPEPAVKSYSDLDSQLSHLEQQPPQLEQAHHLPTFNEQLQKFQAMESQIGDFYKDMGEL
GDLQGLGLPQRGLVAGDKEHGEQSGEVETRIVRLIEPLKERRRILLASKEMHQVAQDLED
EIMWIQERLPLASCKDYGNNLQSVQQHVKKHQTLQRELTGRRARIEEVLDRAAIIASLRT
PEVDFVREGAGHVRQLWEVLQLETERRSVMLDAALQSQQYYSEAAKVESWLSGQKLHVAN
EEKGTDEASTLQLLKAHLALEQTVETYAETVGMLSQQCQHLLELGHPESEQITKQQSHID
RLYVSLKDMVEHRKTKLEQQYWLYQLNKEVEELEKWITEREAVASSTELGHDLEEVTVLQ
ERFTKFASETNSVGEQRMEQVNKMVNEMIDCGHSDAATIAEWKDGLNESWADLLELMETR
RQMLAASQQLHKFFTDCKEVLAQITGKMKQLPEVRACQANITNPATLQRLMHSFEHALQL
LVAQVRQLQENAAQLRTIYAGEKAEAIMVKEQEVMDAWKELLSSCEASRIQVTSVTDKVQ
FFSVVRENLMWMEGIMGQIRWDEPRDLTGLEVMMKHHQDLKAKVDGRSKTIQQCADLGKI
LIAAGNPASEEIQEKLDSLLTKQKDMIEKWDKHQERLLRKQEHFQFAQETVKAEAWLKAK
EPLMSSKQQEGEEAQAQTDEVEQLILRHEAFRKAAVTWKERFSSLRQLSAAEKKKEEEKK
TTPLSSRRMFPLSCLTPGVPSTSATSSYLRQTIQAQIEPKPFQTNFDLGTSSATQRLSTT
LASYNPVINGSGYHGLEQQCVGKVGHNSYLGMNQQVAGAGSDSGLSASQSGGAESCTYHG
INHQTPGSAESSGYFGVTTGCLGSLQNHLGAGKLGSSGNIAQQPSSGGMVSPSFLPQQNM
GSSGYLAQPQNLGSSGYLGQQSNMGSSGYLAQQPNLGSSGYLAQQSNLGSSGYLAQQPNL
GSSGYLAQQPNLGSSGYLAQQPNLGSTGYLAQQPNLGSSGYLPQNYQGSGGMGSSGFLAQ
NHYSSGSLGSSGFLAQSGGIMDPKMAYAWQHLKADFMQPRINHIHKAINPLLEASRLQRE
QFGDIPMADMVGPESGLELLHGRLQRDPRGSRSDPQMDHLRREREYKLGRQTSSEQEIQA
RLNELPLIVRQERYRRRVERQSSSEQEGSNKQRIQRQDSSDMEGSVKDGSDKRSGEKRST
MAEIVEQVQEREAAHARGEPYRPPSSLSAPVTRFDGRPRARDRPKPRRRPRPKEPETTRR
SRSAPATGAPTTPQPPSHTAQNEGFLYRKKATSTDLEAQQRSPNSKSWVNVYCVLKEGKL
TFYKDTKNLTATYNGEPSVDMSDCKFDPSMGYKKKKNVFILQVNDGTNFVFHAKDEEDLK
AWTSSITISIAEHDDLAKWDKPGTSSMDPDRSERKEKSEGDADARSERSELVEGEERSEK
GEGSEKLDTSEIADKLEGGAGGSSTSGRSK
NT seq
4773 nt
NT seq
+upstream
nt +downstream
nt
atgaaggaagcagatcgcaggagggaaaatagtttgctgcctcagaccagcctgcttgtg
caccttagcagagctgagcgtttgggacagcaggtggaagagaagatgcttatggcccga
gacacggcccgggatgaggctcaaaagctacacaggaagtggctgaagcaccaggccttt
atggcagagctggcccgcaataaggaatggctggccaagatagaacaggagggtctggag
ctgatccaggagaagccagagctgcgtccggttgtgcagcagaaactggaggagatcaga
gagtgctggtcggacctggagaccaccaccaaggccaaggcgcgccagctctttgagaac
aacaagcccgagccggcagtgaagagctactcggatctcgacagccagctctcccacctg
gagcagcagcccccccagctggaacaggcacaccacctgcccaccttcaatgagcagctc
cagaaattccaggcgatggagtctcagatcggggacttctacaaggacatgggggagctg
ggagacctgcagggcctcggccttccccagcgaggcctggtggcgggcgacaaggagcac
ggtgagcagtcgggtgaggtggagacccgcatcgttcgccttatcgagcctctgaaggag
cggcgccgcatcctgctggcttccaaggaaatgcaccaggttgcccaggatctggaggac
gaaattatgtggatccaagaaaggcttcctttagcatcgtgtaaggattatgggaataac
ctccagagtgtgcagcagcatgtcaaaaaacaccagacgctccagagagagctgacaggt
cggcgggctcggattgaggaggtcttggatcgggccgccatcatcgcctcgctaagaact
ccagaggtggacttcgtgcgcgagggagcggggcacgtgcgccagctgtgggaggtgctg
cagctggagacggagaggcgctccgtgatgctggacgccgccctgcagtctcagcagtac
tacagcgaggccgctaaggtggagtcctggttgtcggggcagaagctccacgtcgccaat
gaagagaaaggcacggatgaggcgagcaccctgcagctgctgaaggctcacctggctctg
gagcaaacagtggaaacgtatgcggagacagtaggcatgctctcccagcaatgccagcat
ttactggaactgggacacccagagagtgagcagattactaagcagcagtcccacatcgac
cgactgtatgtgtccctgaaagacatggtggagcacagaaaaaccaaactggagcagcag
tactggctctaccagctcaacaaggaagttgaggagttagagaaatggatcactgagcgt
gaggccgtggcgagttccactgagctgggccacgaccttgaggaagtgacggtgcttcag
gagaggttcaccaagtttgcctccgaaaccaacagcgtcggcgagcagcgcatggagcag
gtgaacaaaatggtgaacgagatgatcgactgcggccactcggatgcagccaccatcgcc
gagtggaaggacggcctgaacgagtcatgggccgacctcttggagctcatggagacgcgc
aggcagatgctggccgcatcccaacagctgcacaagttcttcaccgactgcaaagaggtc
ttggctcagatcacagggaagatgaagcagctgccagaggtgagggcgtgccaggccaac
atcaccaatccagccaccctgcagagactcatgcactcctttgagcatgcccttcaactg
ctagttgcacaggtgaggcaactccaggagaacgctgcccagctcaggaccatctatgct
ggcgaaaaggcagaggccatcatggtgaaagagcaggaagtaatggatgcttggaaggaa
ctgctgagctcctgcgaggccagtcgcatccaggtgacctccgtaactgacaaggtgcag
ttcttctcggtggtgcgtgaaaacctaatgtggatggaaggcatcatgggccaaataaga
tgggatgagccaagggatttgacaggtctggaagtgatgatgaaacatcaccaggatcta
aaagccaaagtagacggccgcagcaagaccatccaacagtgtgcagacctcggcaagatt
ttgatagctgcaggcaacccagcgtcagaggagatacaagagaagttggacagtctactc
acaaagcagaaggatatgattgaaaaatgggacaaacaccaggaaaggttactacgcaag
caagaacacttccagtttgcccaggagacggtaaaggcagaagcctggctgaaagccaag
gagccattgatgagctccaagcagcaagagggagaagaggcccaggcccaaacagatgag
gttgagcagctcatacttcgccacgaggccttccgcaaggccgctgtaacctggaaagaa
cgcttcagctccctccgccagctttccgcagccgagaagaaaaaagaggaggaaaaaaag
acaacgccactctccagtcgaagaatgttcccattatcatgtctgactcctggtgtccct
tcaaccagtgctacctcttcttacttgaggcagacaatacaggctcaaatagaacccaaa
cccttccagaccaattttgacctgggtaccagctctgcaacccagagattgtctacaaca
ctcgccagctataatccagttattaacggttcaggctaccatggactggagcaacagtgc
gttggaaaagtaggacacaactcataccttgggatgaaccaacaggtggctggagctgga
agtgactctggcttatcagcatcccagagtggaggggcagagagctgtacttaccatgga
ataaaccaccaaactcctggtagtgcagagagttctggatactttggagtgaccacaggg
tgtttgggtagtttgcaaaatcatctaggtgctggtaagttaggcagttcaggaaacata
gctcagcagccaagcagtggcggtatggtaagccctagctttttgcctcaacaaaatatg
ggcagttctggatatttggcccaaccacagaatttgggaagttcaggatatcttggacag
caatctaatatgggaagctccggatatttggcacagcagcctaatctggggagctctggg
tatttggcccaacagtcgaatttgggtagttctgggtatttggcacagcagcctaatcta
gggagttctggatatttggcacaacagcctaatctggggagttctggatatttggcacaa
cagcctaatctgggtagtactggttatttggcacaacagcctaatttggggagttcagga
tacctaccgcagaattaccagggcagtggtggaatgggaagctcgggttttttggcacaa
aatcattacagcagcggaagtctgggaagctctggtttcctggcccagagtggaggcatc
atggaccctaaaatggcatacgcatggcagcacctgaaagctgactttatgcagcccagg
atcaaccacatccacaaagctataaatcctctcttagaggccagcagactgcagcgagaa
cagttcggagacatcccaatggcagacatggtgggaccagaatcaggactggagcttctc
catggccgtctccagagggatccccgcggcagtcgctcggatccacagatggatcatctg
aggcgggaaagggagtacaagctgggaagacagacctctagtgaacaggaaatccaggcc
aggctgaatgagctgccgctgatagtgcggcaggaacgctacaggaggcgcgtagagcgg
cagtcgtccagtgaacaagaggggagcaacaagcagaggatacagagacaggactccagt
gacatggagggctctgtgaaggacggctctgacaaacgctcaggggagaagagatctacg
atggcagaaattgtggaacaagtccaggaaagagaggcggcacatgcacgtggtgagcct
tatcgtcctcctagcagcctctcagcacctgtgactcgttttgacggacgcccccgagcc
cgagaccgtcccaagccaaggaggcggccccgtccaaaagagcctgagacaactcgtcgt
tctcgttcggccccggcaactggtgccccaaccacacctcagcctccatcacacactgcc
caaaatgaaggcttcctctaccgtaaaaaggccaccagcactgaccttgaagctcagcag
aggagccctaacagcaaatcatgggtgaacgtatactgtgtgctgaaggagggaaagttg
actttctacaaggatactaagaatctgactgcaacatacaacggggagccttctgttgac
atgagtgactgcaaatttgatccttcaatgggctacaagaagaagaaaaatgtcttcata
cttcaagtaaatgatggaaccaactttgtattccatgctaaagatgaggaggatctgaag
gcatggacctcaagtatcaccataagtattgctgagcatgacgacctggccaagtgggac
aaacctggcacctcgtccatggaccccgaccgctcggagaggaaggagaagtcagagggg
gacgcagatgccaggtcagagaggtccgagctggtggagggggaggagaggtccgagaaa
ggcgagggctctgaaaagctagacacatctgaaattgctgacaagctggagggtggggca
gggggctccagcacatctggcaggagcaaatga
DBGET
integrated database retrieval system
