Xiphophorus maculatus (southern platyfish): 102220954
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Entry
102220954 CDS
T02923
Name
(RefSeq) serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B alpha isoform isoform X1
KO
K04354
serine/threonine-protein phosphatase 2A regulatory subunit B
Organism
xma
Xiphophorus maculatus (southern platyfish)
Pathway
xma03015
mRNA surveillance pathway
xma04261
Adrenergic signaling in cardiomyocytes
xma04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
102220954
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
102220954
09150 Organismal Systems
09153 Circulatory system
04261 Adrenergic signaling in cardiomyocytes
102220954
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
xma01009
]
102220954
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xma03019
]
102220954
03036 Chromosome and associated proteins [BR:
xma03036
]
102220954
Protein phosphatases and associated proteins [BR:
xma01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
102220954
Messenger RNA biogenesis [BR:
xma03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
102220954
Chromosome and associated proteins [BR:
xma03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
102220954
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
WDR55
Beta-prop_CAF1B_HIR1
Beta-prop_EML
Beta-prop_IFT140_1st
WD40_MABP1-WDR62_1st
Motif
Other DBs
NCBI-GeneID:
102220954
NCBI-ProteinID:
XP_014326227
Ensembl:
ENSXMAG00000002009
UniProt:
A0A3B5PSI9
LinkDB
All DBs
Position
12:24002091..24013550
Genome browser
AA seq
455 aa
AA seq
DB search
MAGKRKLSERPGGGSSDVQWCFSQVKGAMDDDVAEADIISTVEFNHTGELLATGDKGGRV
VIFQQEPESKNQPQCRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQKNAAQFLL
STNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPNSVTTLRVPVLRPMDLMVEASPRRVF
ANAHTYHINSISVNSDHETYLSADDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAA
EFHPDQCNTFVYSSSKGTIRLCDMRASALCDQHAKMFEEPEDPNNRSFFSEIISSISDVK
FSHSGRYMMTRDYLSVKIWDLNMETRPVETYQVHEYLRSKLCSLYENDCIFDKFECCWNG
NDSVVMTGSYNNFFRMFDRDYRQDVTFEASRENSKPRSVLKPRKISTGGKRKKDEISVDS
LDFNKKILHTAWHPLDNIIAVATTNNLYIFQDKLN
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atggcaggtaaaagaaaactgtcagaacggcccgggggtgggagcagcgatgtgcagtgg
tgcttctctcaagtcaaaggagcgatggatgacgatgtggctgaagctgacattatatct
actgtggaattcaatcacactggggagctgcttgccactggggacaaaggaggtcgtgtt
gtcatcttccagcaggagccagagagtaagaaccagccacagtgcagaggagagtacaat
gtttatagcaccttccagagccatgagcctgagttcgactacctgaaaagtcttgagatt
gaagagaaaatcaacaagattcgatggttacctcagaagaatgcagcacagttccttttg
tccacaaatgataaaactatcaagctgtggaaaattagtgagcgagacaagagaccagag
ggctacaatttgaaggaagaagacggtcgatacagagatcctaattctgtcacaacacta
cgggtaccggtgttgaggcccatggacctgatggtggaagccagccccagacgagtgttt
gcaaacgctcacacgtaccacatcaactccatatcagtcaacagtgatcatgagacctat
ctgtctgcagacgacctgcgcataaacctctggcatctggagatcaccgatcgcagcttt
aatattgttgacataaagccagctaatatggaggagctgacagaagtgatcacggccgca
gagtttcaccccgaccagtgcaacacttttgtttacagcagcagcaagggaaccatccgc
ctgtgtgacatgagggcatcagcactgtgtgaccagcatgccaaaatgtttgaggagcca
gaagatccaaacaaccgttcattcttttctgaaatcatctcgtccatctccgatgtcaag
tttagccacagtggacgctacatgatgacgcgagactatctgtccgtcaaaatttgggat
ctgaacatggaaacccgaccagtagagacatatcaggtgcatgaatatctcaggagtaag
ttgtgttcactttatgagaacgactgcatttttgacaagtttgaatgctgctggaatggc
aatgacagcgttgtgatgactggttcctacaacaacttcttcaggatgtttgacagggac
taccgacaggacgtgaccttcgaggcgtcacgggaaaacagcaagccgcggtcggtcctg
aagcctcgcaaaataagcacaggtgggaagcgcaaaaaggatgagatcagtgtagacagt
ctggactttaacaagaagatcctccacactgcctggcatccgctggacaacatcattgct
gtggccaccaccaacaatctgtacatattccaagataaactgaactaa
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