Xiphophorus maculatus (southern platyfish): 102221041
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Entry
102221041 CDS
T02923
Symbol
gtpbp3
Name
(RefSeq) tRNA modification GTPase GTPBP3, mitochondrial isoform X1
KO
K03650
tRNA modification GTPase [EC:3.6.-.-]
Organism
xma
Xiphophorus maculatus (southern platyfish)
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
xma03016
]
102221041 (gtpbp3)
Transfer RNA biogenesis [BR:
xma03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
102221041 (gtpbp3)
Prokaryotic type
Methyltransferases
102221041 (gtpbp3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MnmE_helical
TrmE_N
MMR_HSR1
RsgA_GTPase
FeoB_N
Dynamin_N
SRPRB
AAA_16
DO-GTPase2
GTP_EFTU
FtsK_SpoIIIE
Arf
MMR_HSR1_Xtn
ABC_tran
NTPase_P4
MCM
Motif
Other DBs
NCBI-GeneID:
102221041
NCBI-ProteinID:
XP_014324935
Ensembl:
ENSXMAG00000002392
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Position
9:complement(5714547..5735971)
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AA seq
520 aa
AA seq
DB search
MYYSAIMLPVSAVCGGTYRAVIRTLTTRNIPLYRRLSSGGRVLAGLADADTIFALSSGHG
RCGVAVVRISGSAAATALRCMVGLGNQLPPPRTALLRSITDPHSKEVLDRGLVLWFPAPH
SFTGEDSVEFHIHGGPAVITAVLQALGSVPGMRPADAGEFTRRAFHAGKLDLTEVEGLGD
LIHAETEAQRRQALRQMSGELGRLYQDWSHRLKRTLAHVEAFIDFSEDELIEEGVLDQVD
ISVCDLQAEIEQHLKDERRGERLRSGVHVVIAGATNAGKSSLLNTLCQRPAAIVSPIAGT
TRDVVESALDIGGFPVLLSDTAGLRDSPDLVEQEGVRRARERVQQADLTLLVVDSTILPS
EEQEAAAFLLEHLRTLLSSQDQPGAGRCLLVLNKTDLLPEAHREKLNLELRRVSGLPPVC
LISCQTNEGLKDFLTVLQSSVKTMCGDPLSGAPTLTQARHRAHLQQCVAALAQYRWYRDS
DLALAAEGVRLALTSLGRITGRVGAEEILDIIFKDFCIGK
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
atgtattattctgcaataatgctgccagtttccgctgtctgtggaggaacatacagagct
gtgatccgcacacttacgacaagaaacatccctctgtatcgccgtctgtcctctggaggc
agagttctggctggactagcggatgctgacaccatcttcgctttgtcatcaggtcatggc
agatgtggggtagcagtggtccgcatcagtggttctgccgcagccacagcattaagatgt
atggttgggctcggaaatcagctgcctcctccacgaactgcgctgttacgtagcatcaca
gacccccactctaaagaagtactggaccgcggattggtcctctggttcccagcgcctcat
agtttcactggagaagacagtgtggagttccacatccacggtggtcctgctgtcattact
gctgtcttacaagctctaggaagcgtgcctggcatgaggcctgctgacgctggggagttc
acgcgcagggctttccatgcagggaagctcgatttaacggaggtggaaggcctcggggat
ctgatccatgcagagacggaggctcagcggagacaagctctcagacagatgtcaggagaa
ctgggacgcctctatcaggactggagccacaggctgaaacggactttagcccatgtcgaa
gcctttatagacttcagcgaggatgagctcatcgaggaaggagttttagaccaagtggac
atctcagtgtgtgatctgcaagcagagatcgagcagcatctgaaggatgagcggcgaggc
gagaggcttcgcagcggggttcatgtggtgatcgctggcgccaccaacgcagggaaaagt
agcctcctcaacacactctgccagagacctgcagctattgtttctcccattgctgggacc
accagagacgtagtggagtcggcgttggacatcgggggcttccctgtcctgctgagcgac
acggcgggcctcagagacagcccagacctggtggagcaggagggggttcgtcgggccaga
gagagggtgcagcaggctgatctgactctgctggtcgttgactccaccatcctcccctcg
gaggagcaggaagctgcagcgttcctgctggagcacctgaggacactcctgtcctcccag
gaccagcctggagcaggcaggtgtctcctggtgctgaataaaactgatctgctccctgag
gctcacagagagaagctgaatctggaactgagaagagtctctggactcccacctgtctgc
ctgatttcctgtcaaaccaacgaaggactgaaggacttcctcactgtgttgcaaagcagc
gtcaaaacaatgtgtggtgaccctctctccggagcgcccacgctgacccaggcccgccac
agggcccacctgcagcagtgcgtggcggcgctagctcagtatcggtggtaccgcgactct
gacctcgctctggcagctgagggcgtccggttagcgctcaccagcctggggaggatcaca
ggacgagtcggggcagaggagatcctggatattatcttcaaagacttctgcatcggaaaa
taa
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