Xiphophorus maculatus (southern platyfish): 102221061
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Entry
102221061 CDS
T02923
Symbol
lama4
Name
(RefSeq) laminin subunit alpha-4
KO
K06241
laminin, alpha 4
Organism
xma
Xiphophorus maculatus (southern platyfish)
Pathway
xma04510
Focal adhesion
xma04512
ECM-receptor interaction
xma04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
102221061 (lama4)
04518 Integrin signaling
102221061 (lama4)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
102221061 (lama4)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_G_2
Laminin_G_1
EGF_laminin
Laminin_II
Laminin_I
EGF_LMN_ATRN
Laminin_G_3
JAG1-like_EGF2
HSA
Motif
Other DBs
NCBI-GeneID:
102221061
NCBI-ProteinID:
XP_014326878
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All DBs
Position
15:complement(22423252..22463741)
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AA seq
1879 aa
AA seq
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MAAKPLPCLCLVSILSGIICSTSASRLRYEEQQQILMKCPRGSFVSQQNACLPCNCKGHA
DYCEDITGICINCKDHSTGDFCEMCEDGYILSSRQEGLHACVPCSCPLSAPSNNFAVYCK
KGISTVQCKCKEGYAGNHCERCAPGYYGNPMLIGSSCKRCDCNGNTDPNLIFNECHNVTG
RCQHCWGNTAGASCERCAPGFYGDAISAKNCRVCECDKCGTSSCDDRTGVCHCKPGVKGR
LCDQCEEGYFGFSSCQGCRRCECGPASLRTTCHPLTHSCPCRPGAGGRYCERCLSGYWDY
SSSGCRKCDCESGHCNMHTGECLAEATVNLCYNDCDDCIWQLIRDLTLSNKTLDQLKVGV
LNISTGAAANDRLKYYNYTAHHLQRQFEVWRNKLSVMKGKTGELEDSADAVVVDINALGE
SESQVNRRGAQLETETADMLAMAEQLDTNLTDLNKRIEDMIHDWELYNVQREMDPETVRR
NTEVAQEMVSWMRQLNLSPREPIATDETTEAHGLLTRVRQLEKKLMISQGRVPSVQEILS
RFSSRLSEARDFLLSAAGTVQEAEDKNRASLLKFQRKETEQQRLTEDQLAINGTLETSRA
FISDAERMVAEVDAMVQNVTEYHAEIDGASQKLTEKTERLSQVDRDLVQKADDHAAELER
LAYELEEDLKEGDANGFVQRAISAANVYNNIVKYIDDANITSLTTLNLSQRAEDAIGTIK
TQLGYLVTQSENAFRQSVTLRSEQYDVDTKVADGMLYIEETQRTMEKNQKKLEEIVNDIR
VIQTDRTPQRLNFSLEVAEETLNRSAEVLETVTPINNKVQQWAHNMRNNEYSAAAYENAV
ASAKEAVENLNVLVPELLDKLKVVEEKKPVNNVTTNILRIRELIAQARSVAKKVQVSMKF
TGRSSVEVHPPSNPEELKTVTSISLFMRVDPDKDPIEDRFILYLGDRSGRKDYMGLAIKN
DKLVFVYNLGRDDVEIPLTSKPVSQWPAVFNYIKVERLGRHGKVFLTIPSQGSTDEQKFI
QKGEAPIADSLFDIDPKNLVFFIGGVPPDIKLPPPLSLAPFVGCIELASINNDVISLYNF
KETHFLNIADSPPCPRYKLAFSQSRIASYLFDGTGYGLVSNIERRAKFGQVIRFDISVRT
ITNNCTIFLMVNGKNFFLLEMKNGFLRLTYDFSFSNGPKLLENNSPKFQINDAKYHEVSV
IYHMLKKVILLVDKTLVKTVENPQTPLPFSDIYIGGAPSSVLKSRPELSSVVGLKGCVKG
FLFQKKDFNLLEEPGTVGISSGCPEELVMSREASFSGHSYLGSTAKISPFDNFEGGLNFR
TLQPSGLLFYHAQGSDEFSIALENGAVTLNHRGSKVKLQKKQYNDGRTHFLLASVNKQRN
LLLVDDKDKKELKRSPPTAKSSSDSPIKTFYYGGSPSSSLKNFTGCISHAYISRQDRDIE
GEDFQKYTEKVNVSLENCPIQRPPAALMSHHRGSSKAKQSLSQKVARDKSSHLPELPSSN
LESSEPNSHQSQSCHLSPRPRSTRQAFHYGGVANSRQHYEGIPDSLSERCHLSLSLKMES
PFGLIFYASDVQEDNFMALFVADGKLVFSFSVGDQKVQIRSEEKYDDGAWHSIVCVRDGS
MGRLTIDRLTEFEDVAQANNVAWRVSDSLFVGGVPPGKAQRNIQRNSAYSFTGCLKNLQL
DGQRLSSVAESFGVGPCFEGLSEDGTYFSEEGGYVVLDESFELGLRFELTMEVRPRVASA
VLLHVRTAGGYFIMYIHQGAVVVVVHDGKHEFSTKVSPRHGVCDGSWHRITVIRDANVVQ
LDVDSEIKHVVGPVNRRSTDTRKPIFIGGAPDDFLPDSVATRKPYMGCMKNLTINKSPAS
FSKTVLVIGAVSVGSCPGA
NT seq
5640 nt
NT seq
+upstream
nt +downstream
nt
atggctgcaaaacccttgccctgcctttgccttgtctccatcctctcaggaattatctgt
tcaacttctgccagccggttgcggtacgaggaacagcaacaaattctcatgaaatgtcca
agaggttccttcgtcagtcaacaaaacgcctgtctgccatgcaactgcaagggccacgcc
gactactgtgaagacatcactggcatctgtattaactgtaaggatcacagcacaggggat
ttttgtgaaatgtgtgaagacggctacatcctgagctccagacaggaagggctccatgcc
tgcgtcccttgctcctgccccctctctgccccatccaataacttcgctgtgtactgcaaa
aaagggattagcactgtgcagtgcaagtgcaaagagggctacgctggaaatcactgtgag
aggtgtgccccaggttactatggcaacccaatgctgattggttcatcttgtaagaggtgc
gactgcaacggcaacacggaccctaacctgatcttcaacgagtgccacaacgtgacgggc
cgctgccagcactgctggggaaacacggccggcgccagctgcgagcgctgtgcccccggt
ttctatggcgatgccatcagtgccaagaactgcagagtgtgcgagtgtgacaaatgcggc
acctcgtcatgtgacgaccggacaggagtgtgtcactgcaagcccggagtcaaaggtcgt
ctctgtgaccagtgtgaggagggttactttggcttctccagctgtcagggctgcaggagg
tgtgaatgtgggccagcttccctccgcacaacgtgccatccgctcacccacagctgtccc
tgccgcccgggggccggaggccgctactgcgagcgctgcctctcaggatactgggattac
agttcgtccggctgccggaagtgtgactgcgagagcggccactgcaacatgcacacagga
gaatgcctggcagaggccactgtcaacctctgctacaacgactgtgatgactgcatctgg
cagctgatcagagacctgacgttgtccaataagacgctggaccagctgaaggtcggagtg
ctgaacatctccacgggggccgccgccaacgacaggctcaagtactacaactacaccgct
caccacctgcagaggcagtttgaagtctggaggaataagttgtctgtaatgaaaggaaag
actggtgagctggaagattctgcagacgctgtggtggtggacatcaacgcgctcggagag
tcggagagccaggtgaacagacggggggctcagttggaaactgagacggcggacatgttg
gccatggctgagcagctcgacaccaacctcacagatctcaacaaacgcatcgaagatatg
atccacgactgggaactgtacaacgtccagcgggagatggatccagagaccgtcaggcgt
aacacagaggtcgcacaggaaatggtgtcatggatgagacagctcaacttgtcgccacgg
gaacccatcgccacggacgaaacaaccgaagctcacggcttgctgacgcgcgtccgtcag
ttagagaagaagctgatgatctcacagggccgagtcccgtccgtccaggagatcctgtcc
cgtttctcctccagactctctgaggcccgggactttctgctgagcgcagccggcaccgtg
caggaagcagaggacaagaacagagccagcctcctcaaattccagaggaaagagacagaa
cagcagaggctgacagaggaccagctggccatcaacggcacactggagaccagcagagcc
ttcatctctgatgctgagaggatggtggctgaggtggatgctatggtgcagaatgtgaca
gagtaccacgccgagatcgacggcgccagccagaagctgactgagaagacggagcgtctg
tcgcaggtcgacagagacctggtccagaaggccgatgatcacgctgcggagctggagagg
ctagcctacgagctggaggaggatctgaaagaaggcgatgccaatggttttgttcagaga
gcaataagtgctgccaacgtctataacaacatagtgaaatacatcgacgatgccaacatc
acttccctcaccacgctcaacttatctcagagagcagaagacgccattggcacgattaaa
acccagcttggatatctggtgacacagagtgaaaatgccttccggcaatctgttacactg
agatcagaacagtatgatgtagatacgaaagtggctgatggtatgctatatatcgaggag
actcagaggaccatggaaaaaaatcagaaaaaactagaagagatagtgaatgacatccgg
gtgattcagacagaccgaaccccgcagcgtctgaacttttccttggaagtggcagaagag
actctgaaccgctcagcagaggtgcttgagaccgtcactcccatcaacaacaaagtgcag
cagtgggctcacaacatgagaaacaacgagtactctgctgctgcatacgaaaatgctgtt
gcatctgccaaggaagcagtggaaaacctgaatgtgcttgttcctgagctgctggacaag
ctgaaggtggttgaagagaagaagcctgtgaacaacgtgaccaccaacatcctgaggatc
agagagctcatcgctcaagccagaagtgtggccaagaaagttcaggtgtccatgaagttc
actggacggtcttcagttgaggttcatccgcccagcaacccagaggagctgaagacggtg
acatccatcagcctgttcatgagggtggacccagacaaagaccccatagaggaccgcttc
atcctgtatttgggagacagaagtggcaggaaggactacatgggtttggccatcaagaat
gacaaacttgtgtttgtgtacaacctcgggagagacgatgtggaaatccctctgacctcc
aagccagtcagtcagtggccagcagtctttaactatatcaaagtagaaaggttggggagg
catggaaaagtcttcctgactattcccagtcagggctccacagatgagcagaaattcatc
cagaaaggcgaagctcccatcgcagactcactgtttgatatcgaccccaagaatctggtg
ttcttcatcggaggtgtcccaccagacatcaagctacctcctcctctgagcctggccccg
tttgtgggctgcatcgagttggcttcaatcaacaacgacgtcatcagtctgtacaacttc
aaagagactcactttttaaatatagctgattctcctccctgccccaggtacaagttggcc
ttctcccagagtcgcattgccagctatctgtttgatggaacgggctacggactcgtcagt
aacattgagaggagagccaagtttggtcaagtcataagatttgatatttctgtacgaacg
atcacaaacaactgcaccattttcctcatggtcaacgggaaaaattttttccttttagag
atgaagaatggcttcctgcgcctaacatacgactttagcttcagtaatggacctaaactt
ctggagaataactcacctaagtttcaaataaacgatgcaaaataccatgaggtgtcagtg
atctaccatatgttaaagaaagttattctactggtggacaagacccttgttaaaactgtc
gagaatccccaaacccccctgcctttctcagatatctacatcggtggagctccctccagc
gtcctcaaatccaggccggagctgtcttctgtggttggcctgaagggttgtgtcaaagga
ttcctgttccagaaaaaagactttaacctgctggaggagcctggtactgttgggatcagc
agcggctgccctgaggagttggttatgtcccgtgaagcttcgttcagtggccacagctac
ctgggatccaccgcaaaaatttcacccttcgacaacttcgaaggagggctcaacttcaga
acgctgcagcccagtggactgctgttctaccacgctcaagggtctgatgagtttagcatc
gccctggagaacggagcggtcacactgaaccacagagggtcaaaggtcaaattacagaag
aagcaatacaacgatggaaggacacacttcttactggcttcagtgaacaagcagaggaat
ttactgctagtggacgacaaagacaaaaaggagttaaagcgatcaccaccaactgcaaag
tcctcctctgattctcccataaagaccttttactatggaggctctccaagcagcagctta
aagaacttcactggttgcatcagccatgcgtacatcagcagacaagaccgagacattgag
ggtgaggacttccagaagtacaccgagaaggtgaatgtttccctggagaactgtccaata
cagcgacctcccgctgcactgatgtctcaccacagggggtcttctaaagccaaacagagc
ctgtctcaaaaggttgccagagataagtccagtcatcttccagaactccccagctctaat
ctggagtcatcagagccaaacagtcatcagagccagtcttgccacctctcccccagacct
agatcaacacgccaagccttccactatggtggcgttgccaacagcaggcagcactacgag
ggaatccctgactctctgtctgaaaggtgccacttgtctctgtccctgaagatggagtca
ccttttggcctcatcttttatgcatcagatgtccaagaggacaactttatggctctgttt
gtggccgatggaaaactcgtgtttagtttcagtgtgggagaccagaaagttcaaattagg
agtgaagagaaatatgatgacggcgcatggcacagtattgtttgtgttcgtgatgggagc
atggggcgactaactattgacaggctgacagagtttgaggacgtagctcaggcaaacaac
gtcgcctggcgtgtcagcgactccctctttgttggaggagttccacctggaaaagcacaa
aggaatattcagagaaactcggcttacagcttcactggctgtttgaagaaccttcagctt
gatggacaaaggctgtcctctgtggctgagagtttcggggtcggtccatgctttgaagga
ctctctgaggatggaacgtacttctcagaggagggaggatatgtggttttggatgaatcc
tttgagctgggactgaggttcgagttaacaatggaggtgcgccctcgtgtggcctcagct
gtgctactgcatgtgcgcacggcagggggttatttcataatgtacatccatcaaggagcg
gtggttgttgttgttcatgatgggaaacatgagttctctacgaaggtgtcaccgagacac
ggtgtgtgtgacggctcctggcacagaataacagtgatccgggatgccaacgttgtccag
ctggatgtggactctgagattaaacacgttgtgggccctgtgaaccgccgctccacagac
accaggaagccgatatttatcggtggagctccagatgacttcctcccagacagcgttgcc
accaggaagccctacatgggctgcatgaagaacctgaccatcaacaagagcccagcaagc
ttcagcaagacggttttggtgattggagccgtcagtgtggggagctgtcctggagcataa
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