Xiphophorus maculatus (southern platyfish): 102221272
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Entry
102221272 CDS
T02923
Symbol
btaf1
Name
(RefSeq) TATA-binding protein-associated factor 172
KO
K15192
TATA-binding protein-associated factor [EC:5.6.2.-]
Organism
xma
Xiphophorus maculatus (southern platyfish)
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
xma03021
]
102221272 (btaf1)
Transcription machinery [BR:
xma03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
102221272 (btaf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3535
SNF2-rel_dom
HEAT
Helicase_C
HEAT_EF3_N
TPR_Trm732_C
HEAT_2
Vac14_Fab1_bd
HEAT_EZ
ARM_ECM29
Cnd1
Motif
Other DBs
NCBI-GeneID:
102221272
NCBI-ProteinID:
XP_023183160
Ensembl:
ENSXMAG00000007626
LinkDB
All DBs
Position
22:complement(3592469..3627237)
Genome browser
AA seq
1859 aa
AA seq
DB search
MIMAVSRLDRLFILLDTGTTPVTRKAAAQQLGEVVKLHPHELNNLLSKVLTYLRSPSWDT
RIAAGQAVEAIVKNIPEWNPAPKPKEESRENLSPEDSSCDRLNFYHFDISRLLRHGASLL
GSAGAEFELQEDKTGEMDPKERLARQRKLLQKKLGLDMGAAIGMDTDELFNDEDLDYSCH
PSGFKAQGFRATAGCSSRNHVTIQAAELIDSEFRPGMSSRQKNKAKRLAKLVAKQKSRDV
DANEKSNDSIEGEPEEKRRKTTNVVIDQPATEHKVLIDNVPDNSGLLEESHEWPLESFCE
ELCNDLFNPSWEVRHGAGTGLREILKSHGSGGGKLVGSTAEQMSRQHQEWIEDLVIRLLC
VFALDRFGDFVSDEVVAPVRETCAQTLGVSLLHMSENSVAMTVDVLLKLLKEDQWEVRHG
GLLGIKYALAVRQDLISVLLPRVLPAITEGLQDLDDDVRAVAAAALIPVVEGLVQLLPNK
VPFIVNTLWDALLDLDDLTASTNSIMTLLSLLLTFPHVRQCSMEQSLTVLVPRVWPFLRH
TISSVRKAALETLYTLLSKADESCAVWINPILQDMLRHIFQSCILESNDEILELIQKVWM
ELLSQVPQQFVVAASCPWMGAWLCLMMQASHIPIDLNMLLEVKARSKDKTGAKARLGNNQ
VKETVQQYIAGAETLADDSLARDYVVVRARLMAARLLGALCRCICDPQLNAASQEIRPAE
SLGQLLLFHLNSKSALQRIAVALVLCEWAALQKDCQMVSSMVQPRLLAVLTEQLYYDEIA
IPFTRMQNECKQLISLLAEVHIDLQDRLNSSVFTIDQANELVTTIFTETTAGMNVKSKQW
LALENKRQQAQSTVMETNTEWQQLHLRVHMFTACAAINLEVLPDKLNPLVRPLMETVKKE
ENTLIQGYAASFIAKLLRQCAVRSPCPNPKIIKNLCASACMDPSATPSSACPVPTAQEQA
KGGGLERDGMHHIVNKTQGIITLYRHQRAAFAITSKRGPTPKAPKAPVTELPPGSTISSD
NDETKKQFLVQRRGAEFALTTVAKHFGADLNRSLPYLWENTVGPLKAVTKENLCIDRQAQ
LERGDAAAQELVNSLQVLEVMAGAMAGELRPLLLEHLPHLFTCLQHPYTAVRHMAARCVG
VLSKIATLETMNSFLESVLHWLAAIDDCTKQEGAIEALACVMEQLDVDIVPYIVLLVVPV
LGRMSDPSDSIRFMATQCFATLIRLVPLEAGIPDPPAMSADLIQQKARERQFLEQLLDGR
KLENYKIPVPIKAELRKYQQDGVNWLAFLNKYKLHGILCDDMGLGKTLQSICILAGDQYL
RAQEYAKTKAADCSPLPSLVVCPPTLTGHWVDEVAKFCSKEFLNPLHYTGPPTERMRLQH
QVKKHNLVVASYDVVRNDIDFFRNIKFNYCILDEGHVIKNGKTKLSKAIKQLAANFRVIL
SGTPIQNNVLELWSLFDFLMPGFLGTERQFAARYGKPILASRDAKSSSREQEAGVLAMEA
LHRQVLPFLLRRMKEDVLQDLPPKIIQDYYCTLSPLQVQLYEDFAKSRAKASVEDSISAA
SGEEEEKPKLKATGHVFQALQYLRKLCNHPNLVLTPQHPEYNRITDQLACQNSNLRDIQH
APKLSALKQLLLDCGLGGGGGAEGGTEAVVAQHRVLIFCQLKSMLDIVEHDLLKPKLPTV
TYLRLDGSVPAGQRHSIVSRFNNDPSIDVLLLTTHVGGLGLNLTGADTVVFVEHDWNPMR
DLQAMDRAHRIGQKRVVNVYRLITRGTLEEKIMGLQKFKMSIANTVINQENTSLQSMGTD
QLLNLFTLDKDDKSDKGEQSSSTSGKASIKSVLDGLGELWDQQQYDSEYNLDSFMNSLH
NT seq
5580 nt
NT seq
+upstream
nt +downstream
nt
atgatcatggctgtatcaagacttgaccgtttgtttatcttgctcgacactggaaccaca
ccagtaaccaggaaagcagcagcccagcagcttggagaagtggtgaaacttcacccacat
gaactcaacaacctcctgtcaaaggtgcttacctatctacggagtcccagctgggacact
cgaattgcagccggccaagccgtggaggccattgtgaaaaatattcctgagtggaacccg
gctccgaagccaaaggaagagtcccgtgaaaacctgtccccggaggactcgtcctgtgac
cggttgaatttttaccattttgacatctcccgcctgctcaggcatggagcgtcgctgctc
ggatccgcaggagccgagtttgagttgcaggaagacaaaactggtgagatggatcctaag
gaacgtctggctcgtcagaggaagctgctccagaagaagctgggtctggatatgggagct
gctataggaatggacacagacgagctgttcaacgacgaggacctggactattcctgccat
cccagcggctttaaagcccaaggattcagagctacagctggctgcagctcccgcaaccac
gtgactattcaagctgctgaattgatcgactcggagttccggcccggcatgagcagccgt
cagaagaacaaagccaaaagactggctaaactcgtggcaaaacaaaaatccagagacgtg
gatgctaacgagaagagcaatgacagcatagaaggtgaacctgaggagaaacggaggaaa
acaaccaacgtcgtaatcgaccagccggcaacagaacataaggtcttaattgacaacgtt
ccagacaactccggtcttttagaggagtcacacgagtggccgttggagagcttctgtgaa
gagctttgtaacgacctcttcaacccatcatgggaggttcgtcatggtgcaggcacaggc
ctcagagaaatcctgaagtctcatggttctggtggtgggaaactggttggaagcactgca
gaacagatgtcgcgacagcatcaggagtggatcgaggatctggtcatccgtctcctctgt
gtgtttgctttggaccgctttggggacttcgtatctgatgaggtggtggctcctgtcaga
gagacgtgtgcccagacgctcggtgtctctcttcttcacatgagtgaaaacagcgttgcc
atgacggtggacgtcctgctgaagctgctgaaggaggaccaatgggaggtccggcatgga
ggcctgttggggatcaaatatgccttggctgtccgacaggacctgatctccgtcctgctt
ccccgggtgctgcctgcaataacagaaggtctgcaggacctggatgatgatgtcagggcg
gtggctgctgctgctctcatcccagtggtggaagggttggtccagcttctgcccaacaag
gttccttttattgtaaacacactatgggacgcactcctggacctggacgacctgaccgct
tccaccaacagcattatgacgctgctgtctttgctgctgacctttcctcacgttcggcaa
tgcagcatggagcagtcactgactgtcctggttcctcgagtttggccgtttttaagacac
accatatcatccgtaagaaaggctgcgctggaaacgctctacacactgctgtctaaagct
gatgagagttgtgcggtttggataaatcccattttacaagatatgttgcggcacattttc
cagtcctgtatactagagagcaacgacgaaatactggagctcattcagaaggtgtggatg
gagctgctgtctcaggtcccccagcagttcgtggtggcagccagctgtccttggatgggc
gcctggctctgcctgatgatgcaggcctctcacattcccatagacctgaacatgctgctg
gaggtgaaggcccgctccaaggataagactggagcaaaggctcggctaggaaacaatcaa
gtgaaggaaacggtccagcagtacatagccggggcggagactctagcagacgattcgttg
gcgagggattacgttgtggttcgtgccagactcatggccgccaggttgctgggagcactg
tgtaggtgcatctgtgaccctcagcttaatgctgcatcccaggagatccggccagccgag
tctttgggccagctgttgctcttccatctcaactccaaatcagccttgcaacggatagcc
gtggctctggttctctgtgagtgggctgcactacaaaaggattgccagatggtgtcgtcc
atggtgcagccgcgacttctggctgtcctgaccgagcagctgtactacgacgagatcgcg
attcctttcacacgcatgcagaatgaatgcaagcagctcatttcgttgcttgctgaggtt
cacatagaccttcaagatcgtctcaacagcagcgttttcaccatagaccaagccaacgaa
ctggttaccaccatcttcacagagacgacggcaggtatgaacgtgaagtccaagcagtgg
ctggcgctagaaaacaaacgacagcaagcccagtctacggtgatggagaccaacacggaa
tggcagcagctgcatctgcgcgtccacatgttcaccgcctgcgccgccatcaacctggaa
gtgcttcccgacaagctcaaccctttggtgcggccactcatggagacggtcaagaaggag
gagaacaccctgatccagggttatgccgcttccttcatagccaagctgctgcggcagtgc
gccgtccgctcgccgtgccccaacccaaagattatcaaaaacctctgcgcttcggcgtgc
atggacccctcggccacgccctcgtccgcttgtcccgttcccacagcgcaagaacaggct
aaaggaggtgggctagaaagagatggcatgcatcacatagtcaacaaaacccaggggatc
atcactctgtaccgccaccaacgggccgcgtttgcaattacaagtaaaagaggtccgaca
ccgaaggcgccgaaagccccggtgacggagcttcctcctggcagcacaataagctccgat
aacgatgagaccaagaagcagtttcttgttcaaagacgaggagcggagtttgccctaacg
accgttgctaagcactttggtgcggacctcaacaggagtctgccatacctctgggaaaac
acggtgggaccgttgaaggcggtcaccaaggagaacctttgcatcgacaggcaggcccag
ctggagagaggcgatgcggcagctcaggaattggtcaactctctgcaagttttggaagtc
atggctggagccatggcgggtgaacttcgacctttgttactggaacacctacctcatttg
tttacatgcctgcagcacccgtacacagcggtgcggcacatggccgcgcgctgtgtgggc
gtgctcagtaagatagccacactggagaccatgaacagtttcctggagtctgtgctccac
tggttagctgctatcgacgactgcacgaaacaggagggcgccatcgaagcgctggcttgt
gtgatggagcagctggacgtcgacatcgttccctacatcgtgctgctggttgttcccgtt
ctgggccgcatgagcgaccccagcgacagtattcgttttatggccactcagtgcttcgct
acgttaatccgcctggtgcctctggaggcaggaataccagacccgccggccatgtcggcc
gacttgatccaacagaaagcgagagagcgtcagtttctggagcagctgctggacggcagg
aagttggagaactataagatccctgtgccgattaaagccgagctcaggaagtatcagcag
gacggcgtgaattggctggcattcctgaacaaatacaagctgcacggtatcctctgtgac
gacatgggcctggggaagacgctgcagtccatctgcattctggcaggagatcagtacctc
agggctcaggaatatgcgaagaccaaggcagcagactgcagccccctgccctcgctggtg
gtgtgtccgcccacgctgacgggccactgggtggacgaagtggccaagttctgctccaaa
gagttcctcaacccgctgcactacaccggacctcccacggagcgaatgcggttgcagcat
caagtgaaaaaacacaaccttgtagtcgcttcttatgatgtcgtgcggaacgacatcgac
ttttttagaaatataaaatttaattactgcatcctggatgagggtcatgtgatcaagaat
gggaaaaccaaactgtccaaagccatcaagcagctagcggctaacttcagggtcatcctg
tcgggaacgcccatccagaacaacgtcctggagctctggtcgctcttcgacttcctgatg
cccggcttcctgggaacagaacgccagttcgccgctcgctacgggaaacccatcctggcc
agccgcgatgccaagagctcatccagagaacaggaagctggcgtcctcgccatggaggct
cttcatcggcaggttctgccgttccttctgaggaggatgaaggaggatgtgctccaagac
cttcctcctaaaataatccaggactattactgcactctcagccctctgcaggttcagctc
tacgaagactttgcgaagtctcgagccaaagccagcgtggaggacagcatctctgcagcc
tccggtgaggaagaggagaagcccaagctgaaggctacgggtcacgtcttccaggcgctg
cagtacctgcggaagctctgcaaccacccaaacctggttctgacgccgcagcatccggag
tacaatcgcatcacggatcagctggcgtgtcagaactccaacctgcgcgacattcagcac
gcgccgaagctctctgctctcaaacagctgctactggattgcggtcttggcggcggcgga
ggagcggaaggcgggacggaggcggtggtggcgcagcatcgcgttctcatcttctgtcag
ctgaagagcatgctggacatcgtggagcacgacctgctgaagcccaaactgcccactgtc
acctacctgcggctggacggcagcgtgccggctggccagcgccactccatcgtctccagg
tttaacaacgatccctccattgatgttctgctgctcaccacccatgtcggtggtctgggt
ttgaacctcaccggcgcagacactgtggtgtttgtggagcacgactggaaccccatgagg
gatctgcaggccatggaccgtgcccatagaataggacagaaacgggtggtgaacgtttac
cggctgattacgcgaggcacgctggaggaaaagatcatgggactgcagaaattcaagatg
agcatcgccaacaccgtcatcaaccaggagaacaccagcctgcagagtatgggcacagac
cagctgctcaacctcttcactctggacaaggatgacaagagtgacaaaggagagcagtcg
tcatcgacctcagggaaggcgtccataaagtctgtgttggacggcctcggggagctgtgg
gaccagcagcagtacgactctgagtacaacctggacagcttcatgaactcgttgcactag
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