Xiphophorus maculatus (southern platyfish): 102221332
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Entry
102221332 CDS
T02923
Symbol
ccdc88a
Name
(RefSeq) girdin isoform X1
KO
K25392
girdin
Organism
xma
Xiphophorus maculatus (southern platyfish)
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
xma03037
]
102221332 (ccdc88a)
Cilium and associated proteins [BR:
xma03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
102221332 (ccdc88a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HOOK_N
HOOK
DUF4472
KASH_CCD
CCDC160
CHD5
PRR11_2nd
Motif
Other DBs
NCBI-GeneID:
102221332
NCBI-ProteinID:
XP_023182937
Ensembl:
ENSXMAG00000016937
LinkDB
All DBs
Position
22:21298333..21361085
Genome browser
AA seq
2023 aa
AA seq
DB search
MENEVFTPLLEQFLLTPLVCWVKSVGHSTVTDGSKLSEYIELVDGIYLNEIMFEINPKAT
VQRTNKKVNNDPTLRIQNLSILIRQIKAYYQESLQQLVMMPLPNVLVLGRNPLSEQGLEE
MRKMLLLLLGCAVQCEKKEEYIERIQTLDFDTKAAIASHIQEVTHNQENVVDLQWLESGE
MPLEDLDSLSRNLAFHLKRLVDERDTQLETIVELTQERDCVQLCPLAPIATQSPGDSPSM
RRTESRQHLSVELADAKAKIRRLRQELEEKSEQLLDTRQELENMEVELKRIQQESYQLLS
DARSARAYRDELDALREKAIRVDKLESELCRYKERLHDIDFYKARVEELKEDNQILLETK
TMLEEQLDSTRTRSDKLHLLEKENLQLKSKMHDLEMERDLDRKRMEELLEENLVLEMAQK
QSMDESLHLGWELEQLSKTPELTDAPQKSLGEEVNELTSSRLLKLEKENQALLKKVEDLK
GTASQDNTAKLTKANQENQKLNQKLERLENELMVDRESLRSAESLSTDLMKEKALLEKTL
ETLRENSERQMKGLEQENKHLSQTISSLRQRCQVGAEARVKDVEKENRVLHESICETTGK
LNKLEFERKQLRKELELMKEKGERAEELEIRLQKLERENESLQKKVATLGITCEKVSSLE
KENSELETEGRRLKKKLDGLKNMAFQLEALEKENGQLEQENLELRRSTETLRSAGAKAAQ
LEAENRELESERTQLKRSLELLKASFKKTERLEVSYQGLDTENQRLQKALENSSKKIQQL
EAELQEVETENQTLQRNLEELKISSKRLEQLEQENKTLELESSQLEKDKKLLEKENKRLR
QQAEIRDSKLDDDNQRIAALEKENRTMGKEMIFFRDSCTRVKDLEKENKELVKQGSIDKK
TLMTLREELVSEKLRTQQMNNDLEKLTHELEKIGLNKERLLHDESSDDRFKLLETKLEST
LKSSLEIKEEKIAALEARLQESSNLNQQLRQELKTVKKNYEALRQREEEERMVHSSPPKG
VENSQTVNKWEKESHEATRELLKVKDRLIEVERNNATLQAEKVALRSQLKQLETQSSNLQ
AQIVAVQRQTASLQENNTTLQTQNAKLQVENSTLSSQSAALMAQNAQLQSQQSSVEGERE
GALREKEELRATYELLLRDHEKLAALHERQAAEYEALIGKHGGLKTSHKSLEQQHRDLED
RYKQLLQRKGELEELEKNLKEQQDKMAQENQSHQATADQCKLLKEENDRLNTVYRLLMKD
NESLQVDHKNIKTQLNSAKLEQTKLEAEFSKLKEQYQQLDITSTKLTNQCELLSQLKGNL
EEENRHLLDQIQTLMLQNRTLLEQTMESKDLFHVEQRQYIDKLNELRRQKEKLEEKIMDQ
YKFFDPSPPRRRGNWITLKMKKLIKPRSRERMRSLTLTPSRSELGESVFTFVPDSQDSSS
IGSGSNSLDDALTQKRSMRRRGQHSHAQSQGSSNAIKRLPFMRNRSKDKDKDKAIYRRSM
SMNDLLQTMAVAGVSGSQWAGSTENLDGPEGGDGSMTGSSRRSGQRMKELALSTNAIDCA
ALTLPSARRAKLQLQVKDNASCEDVAGSLDDPKSQGRQESSGALALCRPVELKAMCRVPC
SICTSRPSSLHSNRTSSNSNNNSHLTSPLEGKGTLNGSLSRPQSESSGEFSLSLDQEVWS
SSGSSPVQQPASLRSSHQSPLQLRRSLEPSGTATVSAQAQIRKMGSPSEVLSLQQFLDEG
IDPAESGSQENLTVDSPRLSTSSEHAQKDRASTKARGILRSSSGRAAPTSADRALRSSGQ
PGRPSLRKAESTRVKGSAPLRSSLSSQGKATSVSERLDSASSSSTLPRASSVISTAEGTT
RRTSIHDLLSKDHRQPVSVDASPHTPSPKAGVCSQPTPSEYHPNIASPMPKSVSLPCHSS
EDPDLDSLESFLGPSFTAESVFMDSIFSESAENLPFLSLNPTLVSNISGPPAQPRPGPNQ
SPHSQSARLTAYDDGIDPSSVTESGQTLSPEESQSLWYEYGCV
NT seq
6072 nt
NT seq
+upstream
nt +downstream
nt
atggaaaacgaggttttcaccccactgctggagcagttcctgctcacgcctctggtctgc
tgggtaaagagtgttgggcactcgacagtgaccgatggcagtaaattgtcggaatacatc
gagttggtggatgggatttacctgaacgagatcatgtttgagataaatccaaaagcgaca
gtgcagaggaccaacaagaaagtaaacaatgaccctacactgcgcattcagaacctttct
attctcatcaggcagattaaagcctactatcaggagagtctccagcagttggtgatgatg
cctttgccaaacgttctggttctgggccggaacccactctctgaacaaggcctggaggag
atgaggaaaatgttgctgctgcttttaggatgtgctgttcagtgtgagaagaaagaagaa
tacatcgaacgtatccagactctggattttgacaccaaagccgcaatagcatctcacatt
caagaggtgacccataaccaggagaatgtggtggacctgcagtggttggagagtggagaa
atgccccttgaggatttggacagcctgtcgagaaatctggctttccacctcaaacgtctg
gtggatgaaagggacacacagctggagacgatcgtggagctcacccaggagagagactgt
gtgcagctctgtcccctggctcccatcgccacccagtctcctggtgactctcccagcatg
aggaggaccgagagtcgacagcacctctcggtggagctggccgatgccaaggccaaaatc
agacgccttcgacaggaactggaggaaaaaagcgagcagcttctggacaccaggcaggag
ctggagaacatggaggtggagctgaagagaatccagcaggagagctaccagctgctgtcc
gacgctcgctcggctcgggcctaccgcgatgagctggacgcactccgagaaaaagccata
cgtgtcgacaaactggagagcgagctctgccggtacaaggagagacttcatgacattgac
ttctacaaggccagagtcgaggagctaaaggaggacaaccagattttgctagaaacaaag
acgatgttggaggagcagctggattccaccaggacgcggtccgacaaactacaccttctg
gagaaagagaacctccagctcaagtccaagatgcatgatctggagatggagcgggacctt
gaccggaagcgaatggaggagctgttggaggagaatctcgtgttggagatggcccagaaa
cagagcatggacgagtcgctgcacctgggctgggaactggagcaattatcaaagacgcca
gagctgactgatgctccgcagaagtctttgggcgaggaggtgaatgaactgacctccagt
cgcctgttaaagctggagaaagaaaatcaagctctgctgaagaaggtggaggatctcaaa
ggaacagccagtcaggacaacacagctaaactgaccaaagccaaccaagaaaaccagaaa
cttaaccagaaattggagcgactggagaatgaactaatggtggacagggagtcgctccgt
agtgccgagtcactgagtacggacctgatgaaggaaaaggctttgttggagaagactctg
gagacactcagggaaaactcagagagacagatgaagggtctagagcaggagaacaagcac
ctgagccaaaccatttcctcgctgcgtcaacgctgccaagttggagccgaggcccgcgtg
aaagacgtggagaaggagaacagagttcttcacgagtcgatctgcgagaccacgggcaaa
ctgaataagctggaatttgaaaggaagcagctacgaaaggagcttgaattgatgaaggag
aaaggtgagagagcagaagagttggagattcggttgcagaagctggaaagagaaaatgaa
agcctgcagaagaaagttgccactcttggaattacctgtgagaaggtttcttctttggag
aaggagaactctgagttggagacggagggccgccgtctaaagaaaaaactggacggtctc
aaaaatatggctttccagttagaggcgctggaaaaagagaacggccagctggaacaggag
aacctggagctccggcgctcaaccgagacgctccggtcagcgggggcaaaggctgctcag
ctggaagctgagaacagggagctggagagcgagaggacccagctgaagcgcagcttggaa
ctgcttaaagcctcgtttaagaagacagaaagattagaggtgagctaccaaggtctggac
acagagaaccagcggcttcagaaggctttggagaacagcagtaagaagatccagcagctg
gaggcagaattgcaagaggtggagactgagaatcaaacccttcagcgtaacctggaggaa
ctgaagatctcgagtaaacggctggagcagctggagcaggagaacaaaactctggaactg
gaaagctcccagctggagaaagataagaagcttctggagaaggagaacaagcggctgagg
cagcaggccgagatccgcgactccaagctggatgacgacaaccaacggatcgccgccttg
gagaaggagaaccgcaccatgggcaaggagatgatcttcttcagggactcatgtacgaga
gtcaaggacctggagaaagagaacaaggagctggtcaaacagggcagtatagataagaag
acgctgatgacactaagagaggagcttgtgagtgagaaactgcggacgcagcagatgaat
aatgaccttgagaaacttactcatgaattggagaaaattggactgaacaaagagagactc
ctgcacgatgagagctctgatgacaggtttaagctgcttgaaaccaaactggagtcaact
ctgaaatcatctttggagatcaaagaggagaaaatcgctgctttagaggcgcgattacag
gaatcctccaacctcaaccagcaacttcggcaggagctaaaaacggtaaagaaaaactat
gaggcgcttcgccagagagaggaggaggaaaggatggtgcacagctctcccccaaaagga
gtggaaaactcccagactgtcaataaatgggaaaaggagagccatgaagccaccagggag
ctgctgaaagtcaaagacagactaattgaagtggagagaaacaatgctacgctgcaggct
gagaaggtggctctgagaagccaactcaaacaactggaaactcagagctccaacctgcag
gcgcagattgtagcggtgcagaggcagaccgcctccttacaggagaacaacaccactctg
cagacgcaaaatgccaaactgcaggtggagaactccaccctgagctctcaaagcgcggcc
ctcatggcccagaatgcccagctgcagagccagcagagcagcgtggagggagaacgggag
ggagcgctgagagagaaggaggagctgagggcgacctacgagctgctgctccgggatcac
gagaagctggcggcgctccacgagcggcaggcggccgagtacgaagctctgattgggaaa
cacggcggcctgaagacctcccacaagagcctggagcaacagcacagagacttggaggac
aggtacaagcagctcctgcagagaaagggtgagctggaggagttggagaaaaacctgaag
gagcaacaggacaagatggcacaggagaatcagagccaccaagccacagctgaccagtgc
aaactgctcaaagaggaaaacgacaggctgaacacagtctatcgcctgctgatgaaggac
aacgagagtctgcaggtggaccataagaacataaagacccagctgaacagtgcaaagctg
gagcagaccaagctagaagccgagttctccaaactcaaggagcaataccagcagctggac
atcacctccactaaactcaccaaccagtgtgagttgttgagccagctgaaaggcaacttg
gaggaggagaaccgtcacctgttggaccagatccagaccctgatgctgcagaaccgcaca
cttctggagcagacgatggagagcaaggacctgttccatgtagagcaaagacaatacata
gacaagctaaacgagttgaggagacagaaggaaaaactcgaggagaaaataatggaccag
tataaattctttgatccttcgcctccacgcaggcgtggcaactggatcactctgaagatg
aagaagctgatcaagccaaggagccgggagaggatgcgttctctcacgctgaccccctct
cgttcggagctgggggaaagcgttttcacttttgttccagacagccaggacagctcctcc
atcggctctgggtccaactcgctggatgacgcgctcacacaaaagaggagcatgagaagg
agagggcagcattcccatgcccaaagtcagggttcgtccaatgctataaagaggttgcct
ttcatgaggaacagatccaaggacaaagacaaagacaaggccatctaccgacgctcgatg
tccatgaacgacttgctgcagacgatggcagtggccggtgtttccgggtcacagtgggcg
ggcagcacggagaatctggacggacctgaaggaggagacggcagcatgacgggcagcagc
aggcgcagcggacagcgcatgaaggagctggccctgtccaccaacgccatcgactgcgct
gcactaacactgccgtctgcgaggcgggctaaactccagcttcaggtcaaagacaatgcc
tcatgtgaggatgttgctggttccttagatgaccctaagagtcaaggccggcaggagtct
agcggtgctcttgctttgtgtcgtcctgttgagctgaaggctatgtgcagagtgccctgt
agcatctgtacctccagaccctccagcctccatagcaacaggacaagtagcaatagtaac
aataactcacacctcacctctcctctggagggcaaaggcacgctgaatggcagtcttagc
aggcctcagagtgagagcagcggggagttcagcttgagcctggaccaggaggtgtggtcc
agtagcggcagcagccccgtccagcagcccgcctccttgcgctcctcccaccagagcccc
ctgcagctgcgcaggtccctggagccgtccggcaccgccaccgtctccgctcaggcacaa
atcaggaagatgggctcccccagcgaggttctgtccctgcagcagttcctagatgagggt
attgatcctgcagagtctggcagtcaggagaacctcacggtggattcccctcgcctctcc
acttcttctgagcacgctcagaaagatcgcgcctccaccaaggcgcggggcattttgcgc
tccagcagtgggagagcggcgccgaccagcgctgaccgggctctgaggtcctcgggacag
cccggccggccgagcctgcggaaagccgagagcacgcgcgtcaaaggctccgcccctctc
cgctccagcctctcctcccaggggaaagccacgtccgtctccgagcgcctggactccgcc
tcctcctcctccacactgccccgggccagcagcgtcatctcgacagccgaaggtaccaca
aggcgcaccagcatccatgacctactgtccaaagaccaccggcagcccgtgtctgttgac
gcctctcctcacaccccctccccaaaggctggagtatgctcgcagccgacacccagtgag
taccaccccaacatcgcctcccccatgcccaaatcagtcagcctaccctgccacagctca
gaggaccccgacctcgacagcctcgagtctttcctcggcccctccttcaccgcagagtca
gtgttcatggactccatctttagcgagtcagcagaaaatctccccttcctgtccctgaac
cccaccctagtcagcaacatcagcggccccccggcccagcctcgccctgggccgaaccag
agcccacacagccagtcagcccgcctgacggcgtacgatgatggtattgatccaagtagt
gttactgagtcagggcagactctgagcccagaggagagccagtctctgtggtacgagtac
ggctgtgtgtga
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