Xiphophorus maculatus (southern platyfish): 102221492
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Entry
102221492 CDS
T02923
Name
(RefSeq) gamma-aminobutyric acid receptor subunit alpha-6-like
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
xma
Xiphophorus maculatus (southern platyfish)
Pathway
xma04080
Neuroactive ligand-receptor interaction
xma04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
102221492
04082 Neuroactive ligand signaling
102221492
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
xma04040
]
102221492
Ion channels [BR:
xma04040
]
Ligand-gated channels
GABA-A
102221492
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
CytochromB561_N
Motif
Other DBs
NCBI-GeneID:
102221492
NCBI-ProteinID:
XP_005808827
Ensembl:
ENSXMAG00000012573
UniProt:
M4ADT0
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Position
11:complement(6169100..6199162)
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AA seq
465 aa
AA seq
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MSIGSLRGMAFVLTSLFLFCASSVCETQHSETSIYLDNITQILDRLLDGYDNRLRPGFGG
PVTEVKTDIFVTSFGPVSDVEMEYTMDVFFRQTWIDERLKFEGPIEILRLNNLMVSKIWT
PDTFFRNGKRSISHNMTTPNKLFRIMQNGTILYTMRLTINAECPMRLMNFPMDGHACPLK
FGSYAYPISEIVYTWKKGPLSSVEVPQESSSLLQYDLIGQTVSSERLKSNTGEYVIMTVH
FHLQRKMGFFLIQTYIPCIMTVILAQVSFWINKESVPARTVFGITTVLTMTTLSISARHS
LPKVSYATAMDWFIAVCFAFVFSALIEFAAVNYFSTLQANRELRKAAAIKAAAQEAAAAA
AVVPAASTGTEGDVASVDANSVLKKRMNSAPVFDRPAKTFPNPPVNAQAFLQQGSAVPAN
NVLTGTSIIDKYSRILFPLSFGAFNLVYWIVYLTKDTMEMSRDTV
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atgtcgatcgggtctttgcgaggcatggctttcgttttaacgagcttgttcctgttttgt
gcgagtagtgtttgtgagacgcaacacagtgaaaccagtatttatttggataatatcacg
caaatattggatagattactggatggctatgacaacaggctgcgacctggatttggaggt
cccgtcacggaggtcaaaactgacatctttgtcaccagctttggtccagtttcagatgta
gagatggagtacaccatggatgtgttctttcgtcagacatggattgatgagcggctcaaa
ttcgaaggcccaattgagatcctgcggctaaacaaccttatggtcagcaaaatctggacc
cccgacacatttttccggaatggcaagaggtcaatctctcacaacatgaccactccaaac
aagctgttccgcatcatgcaaaatggaactatcctctacaccatgagattaactataaat
gcagagtgcccaatgcgcctcatgaacttcccaatggatggccatgcctgcccactcaaa
ttcgggagctatgcataccccatcagtgagattgtgtacacatggaagaaagggccttta
tcttctgttgaagtcccacaggaatcatccagcttgttgcagtatgaccttattggccag
actgtatcaagcgagaggctgaagtccaacacaggtgaatatgtcataatgactgtccac
ttccatcttcaaaggaaaatgggtttcttcctgattcagacctacattccctgcataatg
actgtcattctggcacaagtttccttctggattaacaaggaatcagttccagctcggact
gtttttggtataaccactgtcctgaccatgacaacattaagcatcagtgcacggcactcc
ctccccaaagtttcatatgccaccgcaatggattggttcattgctgtgtgctttgccttc
gtcttctctgccctcattgagttcgcggctgtcaactacttttcaacactccaagccaac
cgagagctgagaaaggcagcagccataaaggcagccgctcaagaagcagcagcagctgca
gccgtggttccagcagcgagcacggggacagagggagacgttgcatcagtggatgccaat
agtgtattgaagaagaggatgaactctgcaccagttttcgatcgacctgcaaaaactttt
ccaaaccctcctgtcaatgcccaagctttcctccagcaaggctccgcggtaccagccaac
aacgttctgacaggcaccagcatcattgacaaatactcacgcatcctttttcccctttcg
tttggcgcctttaacctggtctactggatcgtttatctcaccaaggacaccatggagatg
tcaagggacactgtctaa
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