Xiphophorus maculatus (southern platyfish): 102221532
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Entry
102221532 CDS
T02923
Name
(RefSeq) protocadherin-20-like
KO
K16498
protocadherin delta 1
Organism
xma
Xiphophorus maculatus (southern platyfish)
Pathway
xma03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
102221532
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
xma01009
]
102221532
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
xma04515
]
102221532
Protein phosphatases and associated proteins [BR:
xma01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
102221532
Cell adhesion molecules [BR:
xma04515
]
Cadherins
Protocadherins
102221532
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_CELSR2_9th
Cadherin_2
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
102221532
NCBI-ProteinID:
XP_014326010
Ensembl:
ENSXMAG00000009562
UniProt:
A0A3B5PQ49
LinkDB
All DBs
Position
23:complement(20124495..20129322)
Genome browser
AA seq
859 aa
AA seq
DB search
MGHGIPDNMNWAGLLQKLLIMLHTKQIICGSIHFSIKEELEPHTLVGSLNKHFAPPYQLL
TEEYLWMNKSTGNFYITEKKMDREHLCSEETKDDECIILQSVIVGPSRELEQFSVIIEDI
NDNAPYFENSKICLDISEDVPAGTSLMLDDQARDRDSGPNGQLKYELKGSGGVFSLKVEE
EGPLIKLIVQKALDRETQDLYQMQLVATDCGVQPLSVSVPIFVTVTDVNDNCPSFSSNSP
LSATISGDSKKDTVVTQVVAADPDLGPNAAIVYSLSPKVSERAKKLLILSSHSGHIRLTQ
DLEIDSSEELVLKVLASGLHCPPAETQVTVSLLPKATQGLTIKIGFIAKHYNQTVVIPES
QPPTPLAVLELEGDSSFKDSSLAIEGDVPFFLSPQSGKYLLSTSKPLDYEMKSEYHISVV
VKGSSSERSVIAPPQREIRVMVEDVNDNAPHFSQTDYQLEVEENNEPALILLQVSATDAD
SGLNGRVTYRLDKHTSAIFKVDSVTGQLSALVPLDREQKSVHKLTVFARDSGVPPLESQA
SVIIRVLDRNDNAPAFSTPHFIFFIPENAPPFAQVGLIEVEDPDEGENGKIELQIVQGNT
SFVVDSIQRMLHTTTNLDREMTDRHELYLAVSDNGRPVALTSSARVTIFIEDINDNNPKV
ILPSSNYSCLVVSPGTPVGTNVTKVYAIDEDSGVNSEITYSVVAPKSVWQNTPFQVDSKS
GNITLRQELLQENMGMHNLFIVVRDNGKPTPLYTTVWINLLVNKSTDQCHLDRAPTWTGR
SDWVESASMSPICEVETARSVQAIYFYLVLCMAVVIIVLFFTTVCLYLKHREYPPKKNMG
HTEENEIPLQIKDKYYSDE
NT seq
2580 nt
NT seq
+upstream
nt +downstream
nt
atgggccatgggattcctgataatatgaactgggctggacttctgcagaagttgctgatc
atgcttcataccaagcagatcatttgtggctccatccatttctctatcaaggaggaactg
gagcctcatactctggttggatcactaaataaacactttgcaccgccttaccagctcctg
accgaggagtacctgtggatgaacaaaagcactgggaatttctacattactgagaagaag
atggatcgtgagcacctctgctctgaggagacaaaagatgatgaatgcattattttgcaa
tctgtaattgttgggccctctagggagctggagcagttttctgtgatcatagaggacatc
aatgacaatgcaccatattttgaaaacagcaaaatatgcctggatatttctgaggatgta
cctgcagggaccagtctcatgctggatgaccaggctcgggacagagatagtggaccaaac
ggacagctgaaatacgaactcaaaggttctggaggagttttttctttaaaggttgaagaa
gaaggaccactaatcaagctgattgtacaaaaggctctggacagagagactcaggacctg
tatcaaatgcagctggtggctactgactgtggagtacagcctctgagtgtatcagtacct
atatttgtcacagtgacagatgttaatgacaactgtccaagctttagttctaacagccca
ctcagtgccacaatctcaggagactctaagaaggatacagttgttactcaggtagttgct
gcagacccagatttaggcccaaatgctgccattgtttattccctcagtcctaaggtctct
gaaagggctaagaaactcttaatcctcagcagtcacagtggtcacatcaggctaacacaa
gaccttgaaatagacagctctgaggagctggtgttaaaagtgttagccagcggccttcac
tgcccaccagcagagactcaggtaacagtatccctactccccaaggctacccaaggtcta
acaatcaagatcgggttcatagctaagcattacaaccagactgttgtgataccagagagc
caaccccccactcccttagctgttttagagcttgagggtgacagcagctttaaagactca
tctcttgccattgagggtgacgtgcctttctttttgagcccacagagtggcaaatatcta
ctttccacatcaaagcccctagactatgagatgaaaagtgaatatcacatttctgtggta
gtgaaagggagttcatctgaaaggtctgtgatcgctccgcctcagcgagagatcagggtg
atggtggaggatgtcaatgataatgccccacatttctcccagactgactaccagctggaa
gtggaggaaaacaacgagcctgcattaatactgctgcaggtatcagctactgatgcagac
agtggactcaacggcagggtgacatacaggttagataaacacacatctgccatctttaaa
gttgactcagtgacaggtcaactatctgcattggttcctctggatagagaacagaaaagt
gtgcacaaactcactgtgtttgctcgagatagtggggttcctcccctggagtcccaggcc
tctgtaattattcgtgttctggaccggaatgacaatgcacctgctttctctactcctcac
ttcatctttttcatccctgagaatgcaccaccttttgctcaggtggggttgatagaagtg
gaagatccagatgaaggagagaatgggaaaatagaattgcaaattgtacagggtaacaca
tcttttgttgtggatagcatacaaaggatgctgcataccaccaccaacttggaccgggag
atgacagatcgtcatgaactttacctggcggtcagcgacaatggccgtccagtggcatta
acctccagtgccagggtgactatctttatagaggacattaatgacaacaacccaaaagtg
atccttcccagcagcaattattcatgtttggtagtctctccaggtactccagtgggtaca
aatgtaacaaaggtctatgccatcgatgaagactctggtgtaaactcagaaatcacatat
tctgttgttgcaccaaagtcagtttggcaaaacacccccttccaggtagactcaaaatca
gggaacattaccttaagacaagagcttttgcaggaaaatatgggaatgcataatctgttc
attgtagtaagagacaatgggaaaccaactccactttacaccacagtttggattaacctg
ttggttaataagagcacagatcagtgccatctagatagggcacctacatggactgggaga
tcagattgggttgaaagtgcttctatgtctccaatctgtgaggtggagactgccagatca
gttcaagcgatatacttttatcttgtgctctgcatggcggtagtaatcatagttttgttt
tttacaacagtttgtttgtacctgaaacacagagaatatccaccaaagaaaaatatggga
catacagaagagaatgagattccactccaaatcaaagacaaatattattctgatgaatag
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