Xiphophorus maculatus (southern platyfish): 102221533
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Entry
102221533 CDS
T02923
Symbol
ap5b1
Name
(RefSeq) AP-5 complex subunit beta-1
KO
K19022
AP-5 complex subunit beta-1
Organism
xma
Xiphophorus maculatus (southern platyfish)
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xma03400
]
102221533 (ap5b1)
DNA repair and recombination proteins [BR:
xma03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AP-5 complex
102221533 (ap5b1)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
AP5B1_middle
AP5B1_barrel
AP5B1_C
AP5B1_N
Motif
Other DBs
NCBI-GeneID:
102221533
NCBI-ProteinID:
XP_005816719
Ensembl:
ENSXMAG00000006875
UniProt:
A0A3B5QKE0
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Position
20:31541055..31546415
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AA seq
941 aa
AA seq
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MATNWTERIRAFCCSPSGFLTETSPDTFLSELLRELRDDRVSYGVKVLLLSPLCEYPTLL
CSSESAGEETALDLMSVFTQCPSRFSQFRCHLLVALTGVLVCSSCVNGHSRAALDFLDLL
LRMARDASDPPGEGTRRLLRATACDCLREMEASCPGLLSQRLELLAGLRQLETSRLHQAF
GVLQILALRNAVYQLTKQAGAGAAHLKALLGGNGSVAWEADQEAVHMDATDAAMLSSLIL
GPMGRVPTLHTGPDCKELRSVLSSLLEESYLLTPLCQAALFHRLTEVVAMVPGIPPAVFR
AQLLRLLGTNEVCLLHVTLLMKCGFTDSLFSAEDEAFLLKRLVVLSQHPLLSSPEKLFYM
DCILHFPENRPISCGDSDEAPPVLLTPQLASVLLPSVFNDSATLLSRLNLQALVFLEEGD
EESRGLAYIYDHLAALLHIVDRGGSRDIVVTFFRAAFLFLFYFHHVERYATCLSEQLCHL
YLQHTRLAPHILNLVNQTQERLPECKWFVGLLQGLQRVITRVPFGQLPLHDLSSHLKVLD
RVAEEEEICQRSSLCFLSTIVTQTSSSLCTSGDWRLGNGLLGVCRRVLLHPNLDSMLIPL
ADILQHLAFHYGDTDIRDHARLYYTFLTMLSREKLSAVLVQSAAEGGGQVKKRTLSCVMA
ESEGLTNTLTVHQTEKPIFQLTEALPGPHQEAENLQLNQEDEYKTLECYRAQFSKSGFAS
LIVLKYHLTHTEPHDPRFEQLFSIQLHFSLTDDHYEELQDISVPCLFRQGPPPVVQLTLK
PRRPYPTTIHASAIFTSKDGLTWHTAMPDIHVAFQQVFLPLPAPPTWSRASTRDVFECLW
DEMRHETGESCISLFCCQLGEAALKALVEKHFHSFLVPDPLEEAAEFRALLFLPPKSHML
LKIGSTEDAAHFNMATDDCRLLPQMNSYLLKVTSSLENSVS
NT seq
2826 nt
NT seq
+upstream
nt +downstream
nt
atggcgacaaactggacggagagaattagagctttctgctgcagtccaagtggcttcctg
acagaaacgagcccggatactttcctgtcagagctgcttcgggagctgcgggatgacaga
gtcagctacggagtgaaggtcctcctgttgtctcccctctgtgaatatccaaccctgctg
tgctcctcagaatctgccggcgaggagacagccctggatctcatgtcggtgttcacccag
tgtccgtccaggttcagccagtttcgctgccatctcctcgtggccctcaccggcgtcctc
gtctgctcctcctgtgtgaacggccactcccgggctgcgctggactttctcgacttgctc
cttcggatggctcgggacgccagcgacccccccggcgagggcacacggcgccttctcaga
gcgacggcctgcgactgcctgcgcgagatggaggccagttgtcccggacttctctcccag
cgcctcgagctcttggccgggctgcggcagctggagacctccaggcttcatcaggctttt
ggggtgctgcagattctggcgctgagaaatgctgtttatcagctcactaagcaagcagga
gcaggcgctgcgcatcttaaagctctgctaggaggaaatggctccgttgcgtgggaggca
gaccaggaagccgtccacatggacgccacggatgcggccatgctgtcgtccctcatccta
ggaccaatgggcagagtgccgacccttcacaccggacctgactgtaaggagctgcggtct
gtcctctcttccctattagaagagtcctacctcctcacgcctttgtgtcaggctgcactt
ttccacagactaaccgaggtggttgccatggtgcccgggatccctccagccgtatttcga
gctcagctcctgcgactgctgggaaccaacgaggtttgcctcctccatgtcaccctgctg
atgaagtgcggcttcaccgacagcctcttcagcgccgaagacgaagccttcctcctgaag
cggctggtagtcctctcccagcacccgctcctgagctcgcccgagaagctcttctacatg
gactgcatcctgcactttccagagaaccgtccaatcagctgcggtgacagcgacgaggcc
cctcctgtgctgctgaccccacagctggcctcggtcctgctgccttcggtgtttaatgac
agcgccaccctgctgagccgactcaacctgcaggctctggtcttcctggaagaaggggac
gaggagagccggggcctggcctacatctacgaccaccttgcggcgctgctgcacatcgtg
gacaggggaggcagcagagatattgttgtgacctttttcagagctgccttcctcttcctg
ttttacttccaccatgtggagcggtacgcaacttgccttagcgagcagctatgccatctc
tacctccaacacacccggctggccccacacatcctcaacctagtcaatcagactcaagag
aggttaccagagtgcaagtggtttgtggggctcctgcagggtctccagagagtgataacc
agggtcccgtttggccagctccccctacatgacctcagcagccaccttaaggtgctggat
cgggtggcagaggaagaagaaatctgtcagcgtagctccctttgctttctgtccactatt
gtcacccaaacttcctcctcgctgtgtaccagtggcgactggcggttgggaaatggtctg
ctgggagtttgccgccgtgtgctcctccatcccaatctggactctatgcttattcctttg
gccgacattctgcagcatcttgccttccactatggcgacacggacatcagggaccacgcc
cgcctctactacacgttcctcacgatgttatctcgggagaagctgtccgcagtgctggtg
cagagtgccgcagagggcggtggtcaagtcaagaagcgaacgctgtcctgcgttatggcg
gagagcgaggggctgactaacaccctgaccgtccaccagaccgagaaacccatatttcag
ctgaccgaggctttacctgggccacatcaagaggcagaaaaccttcagctgaatcaggag
gatgagtacaaaacactggaatgttacagggctcagttcagcaagtctggctttgcttca
cttatcgtgttaaagtaccacctgacccacacggagccccatgaccctcgcttcgagcag
cttttcagcatccagctccacttcagcctcacagacgatcactacgaagagctgcaggac
atcagcgtcccctgtctcttcagacagggaccaccgcccgtggtgcagctgacactgaag
cccagacggccgtacccaaccaccatccacgcaagcgccatcttcacctctaaggacggg
ctcacctggcacaccgctatgccggacatccacgtggcattccagcaggtcttcctgccg
ctgcccgcacccccaacctggagcagagccagcacacgagacgtctttgagtgcctgtgg
gatgaaatgcgccatgagacgggagagtcttgtatcagtctgttctgctgccagctgggg
gaggccgctctgaaagctctggtggagaaacacttccattccttccttgtgccagacccg
ttggaggaggcagccgagttcagggcgctcctgtttctcccaccaaagtctcacatgctg
cttaagatcggctctacggaggacgccgcgcacttcaacatggccaccgatgactgtcgg
ctgcttcctcagatgaactcatacctgctgaaagtcacttcttcactagagaattctgtc
tcatga
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