Xiphophorus maculatus (southern platyfish): 102221939
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Entry
102221939 CDS
T02923
Name
(RefSeq) gamma-aminobutyric acid receptor subunit alpha-1-like
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
xma
Xiphophorus maculatus (southern platyfish)
Pathway
xma04080
Neuroactive ligand-receptor interaction
xma04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
102221939
04082 Neuroactive ligand signaling
102221939
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
xma04040
]
102221939
Ion channels [BR:
xma04040
]
Ligand-gated channels
GABA-A
102221939
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Gene cluster
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Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
CytochromB561_N
Motif
Other DBs
NCBI-GeneID:
102221939
NCBI-ProteinID:
XP_005808829
Ensembl:
ENSXMAG00000012611
UniProt:
M4ADX0
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Position
11:complement(6101028..6132265)
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AA seq
461 aa
AA seq
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MCGQSRVASLCLWTCLLVTSSVLTGKSSGQNGMTDEQKDNTTVFTKILDSLLDGYDNRLR
PGLGERVTEVKTDIFVTSIGPVSDHDMEYTIDVFFRQSWKDERLKFKGPMAVLRLNNLMA
SKIWTPDTFFHNGKKSVAHNMTMPNKLLRITEEGTLLYTMRLTVRAECPMHLEDFPMDAH
ACPLKFGSYAYTRAEVVYVWTRGAAQSVVVAEDGSRLNQYDLMGQSVDSGVVQSSTGEYV
VMTTHFLLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPARTVFGVTTVLTMTTLSI
SARNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNYFTKRGYAWDGKSVVPEKQKKKK
ESLLKKNNTTAYPPTTSTPFAPNPARNPGLATIAKSAPPPPDEPKEEPKPKPPEAKKTFN
SVSKIDRIARIAFPLLFGTFNLVYWATYLNKKPKLQGVNHT
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atgtgtggacagagcagggtggcctctctgtgtctgtggacttgtttactggtcacaagc
agcgtactgactgggaaaagctctgggcagaatggcatgacagacgagcagaaagataac
accacagtgttcaccaaaatcttagacagccttctagatggctatgacaatcgcctcagg
ccaggactcggagagcgtgtaactgaagtcaagactgacatttttgtgactagtattgga
ccagtttcggaccatgacatggagtacaccattgatgtttttttcagacagagctggaaa
gatgaaaggttaaagttcaaagggcccatggccgtgttgcgtctcaacaacctgatggcc
agcaagatctggaccccggatactttcttccacaatggcaagaagtcagtggcccataac
atgaccatgccgaacaagcttctacgaattacagaggaaggcaccctgctttacaccatg
aggcttacagtgagagcagaatgccctatgcatctggaagacttccctatggatgcccat
gcttgtcccctgaaatttggcagctatgcctataccagagcagaggtggtgtatgtgtgg
accagaggggctgctcagtctgtagtggtggcagaggacggctccaggttaaaccagtat
gatctgatggggcagagtgtggattctggtgtggtgcaatcaagcacaggagagtatgtt
gtgatgacaacccacttcctcctgaagaggaaaattggttactttgtgatccagacatat
ctaccctgcatcatgacagtgatcctctcccaagtgtccttctggctcaacagagagtct
gtccctgccagaactgtctttggagtgaccactgtcctgaccatgactactctcagtata
agcgccaggaactctctccctaaagtggcctacgccacagctatggactggttcatcgcc
gtctgctacgccttcgtcttctctgccctcattgaatttgccacagtcaactacttcacc
aagagaggttatgcttgggatggaaaaagtgtagtccctgagaagcaaaagaagaagaaa
gagtctctcctgaagaaaaacaacacaacggcctacccgcctaccacttctacacccttc
gcacccaatcctgccaggaacccgggattagccacaatcgccaaaagcgctcctccaccc
ccagacgagcccaaagaggagccgaagcccaaaccccctgaggccaagaagacctttaac
agtgtgagcaagatagaccggattgccagaatagccttccccctgctctttggaaccttt
aacttggtctactgggcaacctacttgaataagaagcccaaattgcagggggtcaatcac
acctaa
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