Xiphophorus maculatus (southern platyfish): 102222076
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Entry
102222076 CDS
T02923
Name
(RefSeq) transcription intermediary factor 1-alpha-like isoform X1
KO
K08881
tripartite motif-containing protein 24 [EC:
2.3.2.27
]
Organism
xma
Xiphophorus maculatus (southern platyfish)
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
xma01001
]
102222076
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
xma04121
]
102222076
Enzymes [BR:
xma01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
102222076
Protein kinases [BR:
xma01001
]
Serine/threonine kinases: Other
TIF1 family [OT]
102222076
Ubiquitin system [BR:
xma04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
102222076
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bromodomain
zf-B_box
ANCHR-like_BBOX
PHD
zf-RING_UBOX
zf-RING_5
zf-C3HC4_2
zf-C3HC4
zf-RING_2
PHD-1st_NSD
PML_CC
FemAB_like
ANIS5_cation-bd
PRANC
Motif
Other DBs
NCBI-GeneID:
102222076
NCBI-ProteinID:
XP_014331521
Ensembl:
ENSXMAG00000004372
UniProt:
M3ZQ97
LinkDB
All DBs
Position
17:complement(13390297..13402915)
Genome browser
AA seq
1042 aa
AA seq
DB search
MDESADNDDLVIIVENEAESLPAGEEKVKQLGAFGLMDTCPICKLSFHNREPKLLPCLHS
FCRRCLPPPLRSAEPRRDPHGPVGSIRCPVCGQECWEVDVLDNFFVKDSAEVPSSTVEKT
SQVCMSCDDNTEATGYCVECVEFLCLTCVEAHQRVKFTRDHTIRQKEEMSPEALGVSTQK
PVFCDVHKQEPLKLFCETCDRLTCRDCQLLKHKDHNYQFLEDAYRNHKQYLETMTLQLQE
KRKAIEEVSSCINSGLQQVEENRKAVTNEIKKSICNLIMEINRKGKILINQLEALTKDHD
LALKKQQEDINALTRQLDHVISFTKWATASHSGTALLYCKRLILYQIHYLMRTSYNPSIV
PQSSVRFQCRSGFWASNVDLGSLVVERCPGRPPIPSHQQGPRPEAPTGGLSLAAAQQRQS
TLAQLQMQVDKLSHHPQRQPPPNHWSWYQNVRLPAPPGPPPPTRANHGGSSPSQAPPSLM
QPGRRYGNSHPNPRSPPASMIQSPGYGASQSLRELIHSSAFPPKPIDISQGAPRFPQPLS
APQAALHQRCMPESSLLKRSEAGLPVPTVSISVPKPSMGLGLAAGSSEKSSSSFGHVTGQ
GGQYSPLAKPSSSDRTAGSTSWRSAPPSGPAPKRRRRMSPGPIIVIKDEPEDEDEVRFVQ
SSSGSSLPDSSTGAQSKPRPPPKGLVASTTPASTSVNQCNQTQSQPDPEKKPVPEDDPNE
DWCAVCQNGGELLCCDKCPKVFHLSCHIPALNESPSGEWFCSFCRDPESPEMEYDSDRGS
GPASENFPSVDKRKCERLLLRLFSNDVSTDFQQPASPSETRRYKELIKTPMDLTMVKKKL
QSKEDERYGSPEEFVSDVRLIFFNCAKYYKATSEVGSAGLYLEDYFEEQLKLVYPDKVFP
GGREEQMIPPLEDEIEEEEEQPMEPSAATAEDKKPQSPAGDADGGMVPKEEPMAPAESEN
LEERSEMSQKETEEGTADVEGGVPPAEEAKQDESINSKQAESRQSSDTETKDGGKDEKAQ
LPADDAEDTPDTSENPASEQQG
NT seq
3129 nt
NT seq
+upstream
nt +downstream
nt
atggacgaaagtgccgataacgacgacctcgtcatcatcgtggagaacgaggctgagagt
ttgcccgcgggggaagagaaggtgaagcagctgggcgccttcgggctcatggacacatgt
cccatctgcaagctgagcttccacaacagggagcccaaactgctgccgtgtctgcactcc
ttctgccggaggtgcctgcctcccccgttgaggagcgccgagccgaggcgggacccgcac
ggtccagttggttccattcggtgtccggtgtgcggacaggaatgctgggaggttgacgtg
ttggacaacttctttgtcaaggactccgccgaggtgcccagcagcacggtggagaaaacc
agccaggtgtgcatgagctgcgacgacaacaccgaggcgacgggctattgcgtggagtgc
gtggagttcctgtgcttgacgtgcgtcgaggcgcaccagagggtgaagttcacccgagac
cacaccatacgccagaaggaggagatgtctccagaggctctaggcgtgtccacgcagaag
cccgtcttctgcgacgttcacaagcaggagccgctgaagctgttctgcgagacgtgcgac
cggctcacgtgtcgagactgccagctcctcaaacacaaggaccacaactaccagtttttg
gaggatgcgtacaggaaccataagcagtatctggaaaccatgacgctgcagttgcaggaa
aagagaaaagccattgaagaagtgtcgagctgtatcaactccggactgcagcaagtggag
gagaaccggaaagctgtgacaaacgaaataaagaagtccatctgtaacctgatcatggag
atcaacaggaagggaaagatcctgataaaccagcttgaggcgctgactaaggaccacgat
ttggctctgaagaagcagcaggaggacatcaacgccctgacgaggcagctggatcacgtg
atcagcttcaccaagtgggcgacggcgagtcacagcggaacggctctgctgtattgcaag
agactgatcctctaccagatccactacctgatgagaacaagctacaacccgtccatcgtc
ccgcagagctcggttcgcttccagtgccggtcgggcttctgggcctcaaacgtagacctc
ggttcgctggtggtcgagcgatgtccagggaggccccccatccccagccatcagcagggt
cccagaccggaggccccgaccgggggtctttccctcgcagcagcacagcagcgacaaagc
actctagctcagctccaaatgcaggttgacaagctctcccaccatcctcagaggcagccc
cctcctaaccactggtcctggtatcaaaatgtcaggctcccagctcctccaggcccccct
ccacctaccagagccaatcatgggggatcttctccctcccaagctccccccagcttgatg
cagcctggacgcaggtacgggaacagccatccaaaccctaggagccctccagcgtccatg
attcagagcccaggctacggagcgtcacagtctctacgagaactaatccacagctccgca
ttcccccctaaacccatcgacatatcgcagggcgctccccgcttcccgcagcctctgtcg
gctccccaggccgctctgcaccagagatgcatgccggagtcgtccctcctaaagaggagc
gaagccggtctgcccgtcccgaccgtcagcatctccgtcccaaaacccagcatgggtttg
ggtctggcagccggaagctcagaaaaaagcagcagctcgtttggtcatgtgacaggtcaa
ggagggcagtactcgccgttggcaaagccgtcctcttctgacagaaccgcggggtcgacg
tcctggaggtcagcgcctccatcaggccccgcgccgaagcgaagaaggaggatgtctccg
gggcccataatcgtcatcaaggatgaacccgaggacgaggacgaagttcgttttgtgcaa
tccagcagcgggtcaagcctaccggacagcagcaccggcgctcagtcgaagccccggccg
ccgccgaagggacttgtggcgtccacgaccccggcgtccacctccgtcaaccagtgcaat
cagacccagtcgcagcccgacccggaaaagaaaccagtgccagaggacgaccccaacgag
gactggtgcgccgtgtgtcagaacggcggagagctgctctgctgcgacaagtgccccaaa
gttttccacctttcctgccacattccggctctgaacgagtcgccgagcggtgagtggttt
tgctctttctgtcgggacccagagtcaccagagatggagtacgacagcgacagagggagc
gggccggcctccgaaaacttcccctctgtggacaaaaggaaatgcgagcgactgctgcta
cgcttgttcagcaacgatgtcagcacagacttccagcagcctgcgtctccatcggaaact
cggcggtacaaggagctaataaagacgccgatggatttgacgatggtgaagaaaaaactg
cagtcgaaggaggacgagcgctacggaagcccggaggagtttgtttccgacgtcaggctc
atatttttcaactgtgccaagtactacaaggcgacatccgaggttgggagtgccggcttg
tacctggaggattacttcgaggagcagctgaagctcgtctacccggacaaggtcttccca
ggagggagagaggagcagatgatccctcctttagaggacgagatcgaagaagaggaggag
cagccgatggagccgagcgccgccacagcggaggacaagaaaccacaaagccctgcagga
gacgcagacggcgggatggttcctaaggaagaaccgatggctccggcagagagcgagaac
ctggaggaaaggagcgaaatgagtcaaaaggagacagaggaagggactgcagacgtagag
ggaggcgttcctcctgcagaggaggcgaagcaagatgagagcatcaatagtaagcaggcg
gaaagccgccaatcttctgacacggaaactaaagatggcggcaaggacgagaaggcgcag
ctgcctgcggacgacgccgaggacacaccggacacttcggagaatccagcctcggagcag
cagggatag
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integrated database retrieval system
