Xiphophorus maculatus (southern platyfish): 102222158
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Entry
102222158 CDS
T02923
Name
(RefSeq) transcription activator BRG1 isoform X1
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
xma
Xiphophorus maculatus (southern platyfish)
Pathway
xma03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
102222158
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
xma03021
]
102222158
03036 Chromosome and associated proteins [BR:
xma03036
]
102222158
Transcription machinery [BR:
xma03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
102222158
Chromosome and associated proteins [BR:
xma03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
102222158
Chromatin remodeling factors
BAF complex
102222158
PBAF complex
102222158
GBAF(ncBAF) complex
102222158
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
SnAC
HSA
Bromodomain
BRK
QLQ
ResIII
HDA2-3
DEAD
Motif
Other DBs
NCBI-GeneID:
102222158
NCBI-ProteinID:
XP_005797574
Ensembl:
ENSXMAG00000007030
LinkDB
All DBs
Position
5:10216456..10234455
Genome browser
AA seq
1666 aa
AA seq
DB search
MSTPDPPMGGTPRPGPSPGPGPSPNAMLGPSPGPSPGSSHSMMGPSPGPPSSGHSQPVPS
GYGPENMHPLHKPMEGMHEKSLCDDSRFSQMKGLSMRQGGHSGMGPPPSPLDQHSQGYHS
PLGGSDHSSPVASNGPPSGPLMPSTSSSSSSAGSGSASASLDGPNVDQHSLGPNNRSGPP
GNSGPGPSPGPSLGSSVPSLGSGLDGSGPGGPGGPTPFNQNQLHQLRAQIMAYKMLARGQ
PLPDHLQMAVQGKRPMPGMQQQQPMSSLVSGTSAGPGGGPTGPGSGPGPMGSSYSRPHGM
MGPNMPPPGPSGTPVGMQGPNPNGPSKSWPEGPMVNAAAPSNAPQKLIPPQPTGRPSPAP
PSVPPAASPVMPPQTQSPGQPAQPPPMMPYHAKQNRITPIQKPCGLDPVEILQEREYRLQ
ARIAHRIAELENLPGSLAGDLRTKATIELKALRLLNFQRQLRQEVVVCMRRDTALETALD
AKAYKRSKRQSLREARITEKLEKQQKIEQERKRRQKHQEYLNSILQHAKDFKEYHRSVTG
KMQKLTKAVSTYHANTEREQKKENERIEKERMRRLMAEDEEGYRKLIDQKKDKRLAYLLQ
QTDEYVANLTELVRAHKAAQALKEKKKKKKKKKKLENAEGQTPALGPDGEPLDETSQMSD
LPVKVIHVDSGNILTGVDAPKAGQLETWLEMNPGYEVAPRSDSEDSEEEEEEEEEEEEPQ
PSSAPVEEKKKITDPDSEDVSEVDVRHIIENAKQDVDDEYSGAAFARGLQSYYSVAHAVT
EKVEKQSTLLINGQLKQYQIKGLEWLVSLYNNNLNGILADEMGLGKTIQTIALITYLMEH
KRLNGPYLIIVPLSTLSNWVYEFDKWAPSVVKVSYKGSPAARRAFVPQLRSGKFNVLLTT
YEYIIKDKQVLAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYLAPRRVLLTGTPLQNKLP
ELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGEKVDLNEEETILIIRRLHKVLRPFLLRR
LKKEVEAQLPEKVEYVIKCDMSALQRVLYRHMQAKGVLLTDGSEKDKKGKGGTKTLMNTI
MQLRKICNHPYMFQQIEESFSEHLGFSGGIVQGPDLYRASGKFEVLDRILPKLRATNHKV
LLFCQMTTLMTIMEDYFAYRNFKYLRLDGTTKAEDRGMLLKTFNEPGSEYFIFLLSTRAG
GLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAK
YKLNVDQKVIQAGMFDQKSSSHERRAFLQAILEHEEQDEVWGQELVNEEDEVPDDETVNQ
MIARSEEEFEQFMRMDLDRRREEARNPRRKPRLMEEDELPTWIMKDDAEVERLTCEEEEE
KMFGRGSRQRKEVDYSDSLTEKQWLKAIEEGTLEEMEEEVRHKKTTRKRKRDRDLDLPGP
SSSSGSRGRGDRDDDGKRQRKRGRPPAEKLSPNPPGLTKKMRKIVDAVIKYKDSTSGRQL
SEVFIQLPSRKELPEYYELIRKPVDFRKIKERIRSHRYRSLGDLERDVMLLFQNAQTFNL
EGSLIYEDSIVLQSVFTSLRQKIEKEEESEGEESDEEEEEQEDGSESESRSVKVKIRLSR
KDKGGDRGKGRSRRTGRTRAKPVVSDDDSEDEQEEERSASGTDEEA
NT seq
5001 nt
NT seq
+upstream
nt +downstream
nt
atgtcaacacctgatcctcccatggggggtaccccccgtccgggtccatcacccggtcct
ggcccctcccccaatgctatgcttggccccagcccgggtccttcccctggctcctctcac
agcatgatggggcccagccccggtcctccttcctcgggacactcccagccagtaccctct
ggatatggccccgaaaacatgcaccctttgcacaaacccatggagggcatgcatgagaag
agcttgtgtgatgacagtcgcttcagtcagatgaagggactttcgatgagacagggcggg
cacagtggtatgggccctccacccagccctctggaccaacactcacaaggctaccactct
ccacttggtggctcggaccactccagccctgtcgcttcaaatggccccccatccggtcct
cttatgccatcaacctcctcctcatcatcttctgcaggttctggttctgcttcagcctct
cttgatggccccaatgtagatcaacattccttggggcctaataaccggtctggacctccg
gggaattctggacctggccctagccctgggcctagccttggctccagcgttcccagcctc
ggttctggccttgatggtagtggccctggaggacctggtgggccgactccctttaaccaa
aaccagcttcaccaactcagagcccagatcatggcgtataagatgctcgcccgaggacag
cccctgccggatcatctccaaatggctgttcaaggaaaaaggccgatgccagggatgcag
cagcagcagcccatgtccagtctggtttctggaactagtgcaggaccaggaggtggtcca
acaggacccggatcagggcctggacctatgggctcaagctacagtcggcctcatggcatg
atgggtcccaacatgcctccccctggtccttcagggaccccagttggcatgcaaggaccg
aatcccaatggaccctccaagtcatggcctgaaggccccatggtgaatgcagcggccccc
tccaacgcaccccaaaaattgatccctcctcagcccacaggcaggccttctcctgctccc
ccatcagttcccccagctgcttcccctgtaatgcccccacagacccagtcccctggtcag
cctgctcagcctcctcccatgatgccttaccacgccaagcagaaccgcattacccccatc
cagaaaccctgtggtctcgaccctgtagagattctgcaagagagggagtacaggttgcag
gctcgtattgctcatcgcattgctgaattggagaacctgcctggttctttggcgggtgat
ctacgtaccaaagctacaatagagctcaaagctcttcgtttgctgaacttccagagacag
ctgcgtcaagaagtagtggtgtgcatgcgacgtgacacagctctcgagactgctctggat
gccaaagcctacaagcggagcaagcgccagtctctgcgggaggcccgcatcacagagaaa
ctggagaaacagcaaaagattgagcaagagcgcaaacgcagacaaaaacatcaggagtac
ctcaacagcattctccagcatgccaaagacttcaaggagtatcaccgctcagtcacggga
aagatgcagaagctgaccaaagccgtgtccacctaccacgccaacacggagcgtgagcag
aagaaggagaatgagcgcattgagaaagaacggatgaggaggcttatggctgaagatgaa
gagggctaccgtaaactgattgaccagaagaaggataagcgcctggcctatttgctgcag
caaactgacgagtatgtcgctaacctcactgagctggtacgagcccacaaagctgcacag
gccctcaaggagaagaaaaagaagaaaaagaaaaagaagaagttggagaatgcagagggt
caaactcctgctcttgggccggatggagagcccctggatgaaactagccagatgagtgac
ctgcctgtaaaggtcatccatgtggacagcggcaatatcttgacgggcgtggatgctccg
aaggctggacagttggaaacatggctggagatgaaccctggttatgaggtcgctccccgc
tcagacagtgaagacagtgaggaggaggaagaagaagaggaagaagaagaggagcctcaa
ccttcatcagctccagtggaagaaaagaagaagattacggacccagacagcgaagacgtg
tcagaagtggatgtccgacatatcattgaaaacgctaaacaggatgtggacgacgagtac
agtggtgcagcgttcgctcgagggctccagtcgtattattctgtggcccatgccgtcaca
gagaaggtggagaaacagtctactttactgataaatggacagcttaaacaatatcagatt
aaaggtctggaatggctagtttctctttacaataataatctgaatgggatcctggctgat
gagatgggtttgggaaaaaccatccagacgattgctcttatcacctacctcatggagcac
aagcggctcaacggaccctacctcatcattgtccccctctcaactttgtccaactgggtg
tatgagtttgacaagtgggcaccatcggtcgttaaagtgtcctacaaagggtctcctgct
gctagaagagcctttgtcccccagctgcgaagcggcaagtttaatgttttactcaccact
tacgagtacatcatcaaggacaaacaagtactggccaagattcgatggaagtacatgatt
gtggatgaaggccaccgcatgaagaaccaccactgtaagctgacccaggttctaaacacc
cactacctcgctccgaggagagtgttgctgaccgggacgccattgcagaacaaactacct
gaactgtgggcgctcctcaacttcctgctgcccaccattttcaagagctgcagcacattc
gagcagtggttcaacgccccgtttgcaatgactggagagaaggtggatcttaatgaagag
gagacaatcttgattattcgtcgcctgcacaaagtgctccgccccttcctgctgcgaagg
ttaaagaaagaagtggaggctcagcttccagaaaaggtggagtatgtcatcaagtgtgac
atgtcggctcttcagagggtcctgtaccggcacatgcaggccaaaggggtcctgctcact
gacggatccgagaaagacaagaagggtaaaggaggcacaaaaactctgatgaacaccatc
atgcagctgaggaagatctgtaatcatccatatatgttccagcaaattgaggaatctttc
tctgagcatttaggattctctggtggaatagtccaaggtcctgacctttatcgagcttca
ggaaagtttgaggtgctggatcgcatcctgccaaagctgagggccacaaaccacaaagtg
ctgctcttctgccagatgaccacactcatgaccatcatggaggattacttcgcctaccgc
aacttcaagtatctgcgtctggacggcacaacaaaggctgaagaccgaggaatgctgctg
aagacatttaatgaaccggggtcagagtactttatttttctgctgagcacaagagccggc
ggtctcggcctcaacctgcagtctgcagacactgtgattatttttgactcagattggaac
ccccatcaggacttacaggctcaagacagagcccatcgcatcggccagcagaacgaggtg
cgagtgctgcgcctctgcaccgtcaacagcgtggaagagaaaattctggcagccgccaag
tataaattgaatgtggaccagaaagtcatccaggccggcatgttcgatcagaaatcctcc
agccacgagcgccgggccttcctgcaggccatcctggagcacgaggagcaagacgaggtc
tggggtcaagagcttgtgaatgaggaggacgaggtgccggacgatgagaccgtcaaccaa
atgatcgccaggagcgaagaggagtttgagcagttcatgcgcatggacctggacaggcgt
cgcgaggaggctcgtaatcctcggcgaaaacctcgtctgatggaagaggacgagcttccc
acctggatcatgaaggacgatgctgaagttgagcgtctgacctgcgaagaggaggaggaa
aaaatgtttgggcgaggttctcgacagcgcaaggaggtggactacagcgattcactgaca
gagaaacagtggctcaaggcaattgaggaaggcacacttgaagagatggaggaagaagtg
cgtcacaaaaagacaacccgaaagaggaagagggaccgtgatctggatctcccaggaccc
tcgtcttcctctgggagccggggacgaggcgacagagatgatgatgggaagagacaacgg
aagaggggaagaccgccagctgagaaactctcccccaaccctccgggcctcacaaagaaa
atgaggaaaatagtggatgctgtcatcaaatataaagacagcaccagtgggcgtcagctc
agcgaggttttcatccagctgccgtctcgaaaggaactgcccgagtactacgagctgatc
cgcaagccagtggacttcaggaagatcaaggagaggattcgaagccaccgctaccgcagt
ctgggtgacctggagagagacgtcatgctcctcttccaaaacgctcagaccttcaacctg
gagggttccctgatatacgaagactccatcgtgctgcagtcagtgttcaccagcttgagg
cagaagatcgagaaggaggaggaaagcgagggagaggagagcgatgaggaggaggaagag
caggaagacggatcggagtcagaatctcgctcagtcaaagtgaaaatccgcttgagtcga
aaggataaaggtggagatcgaggaaaggggcgcagcaggcgaacaggacgcacccgggcc
aaaccggtcgtcagtgatgacgactccgaggatgaacaggaggaggagcgctcagccagc
ggcactgatgaagaggcttga
DBGET
integrated database retrieval system
