Xiphophorus maculatus (southern platyfish): 102222166
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Entry
102222166 CDS
T02923
Symbol
tmc4
Name
(RefSeq) transmembrane channel-like protein 4
KO
K21988
transmembrane channel-like protein
Organism
xma
Xiphophorus maculatus (southern platyfish)
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
xma02000
]
102222166 (tmc4)
03037 Cilium and associated proteins [BR:
xma03037
]
102222166 (tmc4)
Transporters [BR:
xma02000
]
Other transporters
Pores ion channels [TC:
1
]
102222166 (tmc4)
Cilium and associated proteins [BR:
xma03037
]
Other cilia and associated proteins
Stereociliary proteins
102222166 (tmc4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TMC
Motif
Other DBs
NCBI-GeneID:
102222166
NCBI-ProteinID:
XP_023186558
Ensembl:
ENSXMAG00000012215
UniProt:
M4ACS7
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All DBs
Position
3:complement(18974465..18982741)
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AA seq
698 aa
AA seq
DB search
MTIEQQRQGLAFSGSGHPTDQESLRFRRVSSRMSTQIYHEPNSSTSLAQEEEQSGSEPTL
ELRNTVFPMALKKAARQVQQMQVPAQFNGGSWKQKRIKFVRQFKSNVREFLYFFSLWGKT
LQKIGGNFGGGVQSYFIFLRFLVILNFVSFLLIAGFVLIPSIVFRSVGIKPESSKADVSS
ECLKYDPNPQGLVVFYEFFLDLLSGTGFMEYSYLFYGYYNNSVIVTSLVGSHFSYNIPLA
YLLTAVFYFAFCLICIIVRMGKAARVAVTTGGSDVRSYSMIVFTGWDYGCLGSKATKLKQ
RNIYYRLQVDLEEERLKKHAASLTLCNKVTLHSLRVLMFFVAVGLIVATFLAIARATTFS
QENSHVPGILGLFYTYLPSIVITLGNFLVPLLCDQIALLEKYPPSATVVVALLRAVVLRL
VSLGILLFTLWKQIMCHDSRDKCNLCHYNHEDYQCWETSVGQEMYKLTLFDLLVSIALLV
LVEFPRRMVVDHWSCKLTQWVGRQEFVVPSNVLGLVYGQTVVWTGALFCPLLPLINTVKF
VILFYCKKITLFYNCRPALRTFRSTSSAIFFLAVLLFGWILALVVMIYSVAVIHPSFACG
PFRSFFRMWKIVPESFSTLPEGARDFLFFIGSQAFSIPLFAISCVFMCYFIALASIYGKS
VAMLRAQLKLAGQDKQFLVKQIEKMKPLSPQHNEGEQD
NT seq
2097 nt
NT seq
+upstream
nt +downstream
nt
atgaccatcgagcagcaaagacaaggcttggcattctcaggaagcggtcatcctactgac
caggagtcgctcaggtttcgccgggtttcttctcgaatgtccactcagatctaccatgaa
cccaacagcagcacaagcctggcacaggaggaggaacagagcggttctgagccgaccctg
gagctcaggaacacagttttccccatggctctgaaaaaagctgcacggcaagtgcaacaa
atgcaggttcctgctcagttcaatggaggatcctggaaacaaaaaaggatcaaatttgtg
cgtcaattcaaaagtaacgtcagagagtttctctacttcttctcactgtggggcaaaacc
ttgcaaaagattggaggaaactttggaggtggagtccaatcttacttcatcttccttcga
ttcttggtgattctcaattttgtgtccttcctgctgattgctggattcgtcctcatcccc
agcatcgtgttcagatcggtgggcatcaaaccggagagcagcaaagctgatgtttcgtca
gagtgcttgaagtatgacccaaatcctcaaggcctggtggtcttttatgagttcttcctc
gatttactgtcaggaacaggtttcatggagtattcatacttgttttatggatactacaac
aacagtgttatagttacttccttggtgggcagccacttttcctacaacatccccctggcc
tatctgctcactgccgtcttctactttgccttttgtctcatttgcatcattgtacgaatg
ggcaaagcggctcgagttgccgtgacaaccggaggcagcgatgttaggagctacagcatg
atcgtcttcaccgggtgggactacggctgcctgggaagcaaagccaccaaactaaaacag
aggaacatttactaccggctgcaggtggatctggaggaggagcgtctaaagaagcatgca
gcgtccctcactttgtgcaacaaagttactttacactctctgcgtgttttgatgtttttt
gtcgcagtcgggctcatcgtagcgaccttccttgccattgctcgtgcgactacattcagc
caggaaaacagccatgtaccagggatcctgggattgttttatacgtatctgccgtccatc
gtcatcaccctagggaacttcttggtgcctctgctgtgcgaccaaattgctttgctagaa
aaatatcctcccagcgctactgtggtagtggcactattaagggcagttgtcttgcgtctc
gtcagtctgggcatccttctcttcaccctctggaaacagatcatgtgccacgacagtaga
gacaagtgtaatctgtgtcactacaaccacgaagattaccagtgctgggaaacaagtgtg
ggacaggagatgtacaagctgacgctgtttgacctcctcgttagcattgctcttctcgtg
ctggttgaatttccacgcaggatggtggtggatcactggtcctgtaagttgacccagtgg
gtgggccggcaggagtttgtggttccctccaacgtcctgggccttgtttacggtcagact
gtggtgtggactggagctctcttttgccccctgctgcctctcatcaacacggtcaagttt
gttatcctcttctactgcaagaagatcacacttttctacaactgtcgtccagcgctgagg
acatttcggtccacatcctccgccatctttttcctggccgttctcctgttcggctggatc
ctcgccttggttgtcatgatttacagcgtagctgtgatccatccgtcatttgcttgcggg
cctttccgttccttctttaggatgtggaagattgttccagagtccttctccactcttcct
gaaggagcaagagattttctcttcttcattggctcacaagctttctccatacctctgttt
gctatatcgtgtgtgtttatgtgctacttcatcgctttagcctctatctatggaaaatct
gttgcaatgctgagagctcaacttaaattggcaggacaggataagcagttcttggtgaag
cagattgagaagatgaagcctctgtcaccacagcacaacgaaggagaacaagactaa
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