Xiphophorus maculatus (southern platyfish): 102222200
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Entry
102222200 CDS
T02923
Symbol
bdp1
Name
(RefSeq) transcription factor TFIIIB component B'' homolog isoform X1
KO
K15198
transcription factor TFIIIB component B''
Organism
xma
Xiphophorus maculatus (southern platyfish)
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
xma03021
]
102222200 (bdp1)
Transcription machinery [BR:
xma03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIB
102222200 (bdp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myb_DNA-bind_7
Myb_DNA-binding
Motif
Other DBs
NCBI-GeneID:
102222200
NCBI-ProteinID:
XP_023193918
UniProt:
A0A3B5QQP0
LinkDB
All DBs
Position
8:21813238..21829237
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AA seq
2163 aa
AA seq
DB search
MFRRSRFSVRPNVGTVGRTAAGTLQEPPAASQETSQTQKEPNESNNASLASNSDVTPSEN
APSTGDGNDQNGDGASSSASVQRRKRFSIKPKVAPGRPLAISRTPKSPVKAVTAPSGDGV
CGSDLEKPLTSSQPAKTAAPRGLQSPRRRRLSEDAKQHKIQPKVGPVSSEKPGPSSDSPS
EDSPKPTHLPADRSKQLENTSTSQAKEVHSRAHDRVPPSIPDKEATEISEKAKTLISSKH
VTSMTPSAMSLSRLLNDPSDVQRMLKARRLRELLRQERCKETNLKRAKARQKEYILDPTK
MTMRDLIHYLPESNPMRSSLEEHHEENETMIPPSPRREEPTERPPVPEVTPAKVNTREEE
EEEEEEEEDAAAEEDQEESLMVPQLKVAEDGSLIIDEESLTVEVQRAKGPNPASDRDPIF
ERGSTTTYASFRKSNYSKPWSIEETDMFYLAVSMVGTDFSMICQLFPHRTRSEIKNKFKK
EERQNSWRIDKAFRERRKLDIEYFSKLLEKIMEFQREKKKLKSLVGKNNKRKARTRPRGK
KSAKSLSDMEEEEQEEKEEDDEIPDLEKEEKENEDQCNEGETPASEPKKKRKRKNGEASP
EETNEKKNKTGDVPEDSEPALPESHTDSEMTPNVNTTKDPVIHPAKLSRARAPKPLLPLG
LTRGKKGKSEETQSDKGDKNASEEEQVNKNESNARKTSREKFSGDDISSEEEEETVKHQG
PTRYGRIPKPNLAFAYPSKDELHSSEAETSSASKSKAKGALKRGKSLKPQSDQKPKKSKL
VTLRSSKPDFSDDEDEEDAGCSSGKGIMSSGLHSLNAVISEVDDPMAELDILASMPDMLG
ISQDALCPDSSCHQTQYETSTAETCDHQLDLLVDVIDIITSEQTELSQDDSYNEAAQTLL
TIGKVSHVSMSTQGEVTTQASTSGMATDGEKSDHLDEQIVADAQPQSALSAACSQTGGDI
SETVASVDSGNLEMRHSDTFHVKTIEPTCDELKTAQSSNGNSPSTKVARFSKVKPKPNLG
RSSRTAPPTIQMEISKKKEAEERHSVLAVEASPKRADSDEALLEDGDSPKDVQLTEEKSG
SSSITQGCSMSLSQVECSGNEVPRGTNSPNRKDVSVAPHDRTVESDLSSSLESKSELTHI
VPEPCTPSDSIQDSSSKHLPAEKDLPENRKSMGVSAPRRSRLSKIKPNLPQMSRTAMNKS
QISKETVKTDPLTTSNSESQKQTILDVETQSTSFLSRNVDVSPQAERQNTLKVLSSPETQ
AEYKSNVELAAAPEHSCSPATSVSPIENKPANKQESSVTSAQLRRSHLQKVKPKPNLTQT
SRGKITKPQATEDTAMKSSIESTRIHSEDTDCASRLDPILASDSVHESTAKQVTNKPAPT
EVVIHVDREHRPVDQGQKQTSIESCSTFKSTDKASDSLDETSEISCSSAMTSHVSRTNFD
SDQDRRGQPAVSVRPEEESAVCKPDGENTTSEQPRRNRISKIRLRPNISQASRASKLKPR
TSESQSEKHANPEPDPDPTCGPSLDKQSENNNLVMELTPPITSQSLEMKKTLSEAKKQNF
DANPQSTSSENLMGATSSTFSNNNPTVKEPQFGQGSNLNSGADLERSNLSACFAPSKELQ
VNQKEDKVPSAQLVKRSRSQKPKPNLSQTSRPVRSKADDKSEVQPQLGVQQTIAKKEKYS
EFTDANLTAQGGPSESMNVSQTVKSAITSNSKIFSSARDQTEPCAASASDQTGDKSNTGN
STTTQAVRRPQSPASEQNRETEEKVLTNVEVSSSAITEKTTPQRRQRFSKVKPKPNLEKT
CRVAVRSLQSDDHSRPLEDQSKGMSSVALEQPLESTKDKMSDKDPANSDCLPSGDCNLAV
KPKPSLHCSGRLRQTQPAENTKPTETDSDSTSQAFGASREIKKSVRELKADDPEKGVIEK
SSEKDSSSIDSRSSHSRVKPQSSYGHETSRAEAIQRDPLLSQILPEQVPSDPDEPFFILS
LTEIPVPSAGEVGASGAQNLSYRPAAGASGQQPSVSEVSLKAEENHPEVSLEPKVFKNSI
AGPNEKAGDDSGDKETLLSRKAKVSEASVAETRSSECRKAASKRNQTKTPTKAEQTSSKP
TASASNSNIPSQTAAAAAADCAHIGLRSTALTSPERESGFVDNEPTSVSQYFLSDIFTEV
DEG
NT seq
6492 nt
NT seq
+upstream
nt +downstream
nt
atgtttcgtcggtcgagattcagtgttcgccccaatgtcggcacggtcgggagaacagca
gcaggaacacttcaagaacccccggcagcaagccaggagacaagtcagacccaaaaggaa
ccaaacgagagcaataatgcatctctagcaagcaactctgacgtgaccccatcagaaaat
gctcccagtacaggcgatggcaatgaccagaacggggacggcgccagctcctcggcatca
gtccagagacggaagcgcttctccatcaagcccaaggtggctcctggacggcctctggcc
atctcccggacaccaaaatcccccgtcaaagcagtcaccgcgccttcaggcgacggcgtg
tgtgggtcagacctagaaaagccgttgacatctagtcaaccggcgaaaacggcagcccct
cgaggactccagtccccgaggcgaagaagactctctgaagatgcaaagcagcacaaaata
caaccaaaagtcggccccgtctcctctgagaaaccaggaccttcgtctgattctccgtct
gaggactcgccaaagccaacccatctgccggcagaccgcagcaaacaactggaaaacact
tcaaccagtcaggccaaggaagttcattcaagagcacacgacagagtgccgccttctata
ccagataaggaagctacagaaatatcagagaaagcaaagactctcatatcatcaaaacat
gtaacttcaatgaccccatcagcgatgtccctgagcagactcctgaatgacccgtcagac
gtacagaggatgttaaaggctcggaggctgagagagctgctgagacaggagcgctgcaaa
gaaacgaatctcaaaagagctaaagcacgtcaaaaggagtacattttagacccaacaaaa
atgaccatgagagacctcatccattacctccctgagtccaatcccatgagatccagtttg
gaagaacaccatgaggagaacgagacgatgatcccaccttcaccaagaagagaagaacca
acggagcgacctccggtacctgaggtcacccctgccaaagtgaataccagagaagaagag
gaggaggaggaggaggaggaagaagacgctgcggcagaggaagaccaagaagaatctctc
atggttcctcagctcaaagtagcagaagacggctcgctgatcattgatgaagagagctta
acggtggaagtccagcgagccaaagggccgaacccagcgtccgacagagaccccatcttt
gaaagaggctccacgacaacttatgcaagcttcaggaagtcaaattactccaaaccctgg
tcgattgaagaaactgacatgttctacctggcagtcagcatggtggggacagacttctcc
atgatttgccaactgtttccacacagaactcgatcagaaataaaaaacaagttcaaaaaa
gaagagcgacaaaactcctggaggatcgacaaagcttttagagagaggcgaaaactggat
atagaatacttttctaagctgctggagaaaattatggagtttcagagagagaagaagaaa
ctcaagtcactcgttgggaagaacaacaaaaggaaagccagaacgaggccaaggggcaag
aaatcggcaaagagtctgagtgacatggaggaagaggagcaggaggagaaggaggaggac
gacgaaattcccgacttggagaaagaggagaaagagaacgaggaccagtgtaacgaaggg
gaaactcctgcttctgagccgaagaaaaaacgcaaaaggaaaaacggggaggcctcgcct
gaggaaacgaatgagaagaaaaacaaaacaggtgacgtacccgaagactcggagccagca
cttcctgagagccacaccgattcagaaatgactccaaacgtaaacacaacgaaggatccg
gttatccatccagccaagctctcacgagccagagcaccaaaaccactcctgcctttgggc
ctgacgcgaggcaaaaaggggaaaagtgaagaaacccagtcagataaaggggataagaat
gcgagtgaagaagaacaggtgaataaaaatgaatcaaatgcacgcaaaaccagtagggaa
aagttttctggagatgacatttcttctgaagaggaagaggaaacggtaaagcatcaagga
cccacgagatatggaagaatccccaaacccaatctggcctttgcttatcctagcaaagat
gaattacattcctctgaagctgaaacttcttcagcctcaaagtccaaagccaaaggtgct
ctgaaaagaggcaaatcactgaagccgcaatcagaccaaaaacccaagaaatccaaactg
gttactctcagatcctccaagccagacttcagcgacgacgaagacgaagaagatgcaggt
tgcagctccggtaaaggcatcatgtcttctggcctgcactcgctgaatgctgtgatttca
gaagtggatgaccctatggccgagcttgatattttggccagtatgcccgatatgctgggc
atctcccaagatgcactgtgtcccgattcatcttgccatcagacacagtatgagacaagc
actgcagaaacatgtgatcatcagttggacctgctggttgatgttatcgacattattacc
tcagaacaaacagaattatctcaggatgacagctataatgaggccgctcaaaccctcttg
accatcggcaaggttagtcacgtctctatgtcaacacagggagaagtgactacacaagcc
tccacatcaggaatggcaacggatggggaaaaatcagaccacttggatgaacagattgtg
gctgatgcacaaccgcaaagtgctttgtctgctgcatgttctcagacaggtggagacatt
tcagaaactgttgccagtgtggactcaggaaacctagaaatgaggcatagcgacacattt
catgttaaaaccattgagccaacatgtgacgagctaaagactgcacagagctcaaatggc
aattctccgtcaaccaaggtggcgcgcttttctaaagtgaagcctaagccaaaccttggg
cgatcttcaaggaccgcacctccaacaatccaaatggagatttccaaaaaaaaggaggct
gaagagaggcactcggttcttgctgttgaagcatccccaaagagagcagactctgatgaa
gcattgttagaagatggtgattctcctaaggatgttcagctaacagaagagaaatctggg
agttcctcgatcacacaaggttgctccatgtctttatcccaggttgaatgtagcgggaat
gaggttcccagaggtacaaactcacccaatcgtaaagatgtaagtgttgcacctcatgac
agaactgtcgagtctgatttaagcagctctttggaatctaagtcagaacttacgcatatt
gtaccagagccatgcacgccttcagactcaatccaagacagcagcagcaaacatcttcct
gctgaaaaagatttacctgaaaatcgaaagagtatgggtgtgtctgcacctagaaggagt
aggttgtcaaaaatcaaacccaaccttccgcaaatgtcaagaactgcaatgaataaatct
cagatcagtaaagagactgtaaagacagacccacttactacgtcaaactcagaatcccaa
aagcaaaccatactggatgtggaaacccagtctaccagtttcttgtcgagaaatgttgac
gtgtcccctcaagcagaacgtcagaatactcttaaggttctttctagtccagaaacacaa
gctgaatataaatcaaatgtagaattagctgcggccccagaacatagttgtagtcctgct
acttcagtctctcctatagaaaacaaaccagctaataaacaagagagtagtgttacatct
gctcagttgagaaggagccatttgcagaaggttaaacccaaaccaaatctaactcagact
tcaagaggtaagataactaaacctcaagccacagaagacacagcaatgaaaagttctata
gagtcgacacggattcactcggaagacactgactgtgcttcaaggttggacccaatactg
gcttcggactccgttcatgaatcgacagcaaagcaggttacaaacaaacctgcacctact
gaggttgttattcatgttgacagggaacatcgtccagttgaccaaggtcaaaagcaaacc
agcatcgaatcatgttcgactttcaagtccacagataaagcttcggattctctcgatgaa
acgagtgaaattagttgcagtagtgcgatgacatcacatgttagccgaacaaactttgat
tctgaccaagaccgacgcggtcaacctgctgtgtctgtaagaccggaggaagagtcagcc
gtctgcaaacctgacggggaaaatacaacttctgaacagccgaggagaaatcgaatatcg
aaaatcagacttagacctaacatttctcaagcatccagagcttcaaagctgaaacctcga
acatcagaaagccagtcagagaagcacgcaaatcctgaaccggacccagacccaacatgc
ggcccttctttggacaaacaaagtgaaaataataatcttgtgatggaattaactccacct
attacctctcaatctttagaaatgaaaaagacactttctgaagcaaagaagcaaaacttt
gacgccaatcctcagtcaacatccagtgaaaacctcatgggtgcaacatcttcaaccttc
agcaataataacccaacagttaaagaaccacagtttggtcaagggtcaaacctgaattca
ggagcagatctagaaagaagcaacctttcagcttgctttgcaccctctaaagagttacaa
gtcaatcagaaggaggataaagtgccatctgctcagctggtcaaaaggagtcgatcacaa
aagcctaaaccaaatttatcacagacctcaagacctgtaaggtccaaagctgatgacaaa
tctgaagtccaaccccaactcggtgtacagcagacaatcgcaaaaaaagagaagtattct
gagttcacagatgcaaacctgacagctcaaggtggaccaagtgagagcatgaatgtttca
caaacagttaaatcagcaataaccagcaattcaaagattttcagttcagcccgagatcag
acggaaccttgtgctgcatccgccagtgatcaaacgggtgacaaatcaaacacaggaaac
tcaacaactacgcaggctgtaagaagacctcaaagcccagcctctgagcaaaatagagaa
actgaggaaaaagtactaacaaatgttgaagtttcaagttcagccattacagaaaaaaca
acgcctcaacgaaggcagcgcttttccaaagtcaaacccaaacccaatttagaaaaaacc
tgtagagttgcagtcagaagtcttcagtcagatgatcacagtagacctcttgaagaccag
agtaaagggatgtcgtctgttgcattggagcaaccgctggaatcaactaaggacaaaatg
tcagataaagacccagcaaactctgactgtcttccatctggagattgcaacttggctgtt
aaaccgaaacccagcctgcactgcagcggacgtcttcggcaaacccagccagctgaaaac
acaaaaccaacggaaacagactccgacagtacttcgcaagcttttggtgcctctagggaa
atcaagaaatctgtacgtgaacttaaagcggatgatccagaaaaaggagtcattgagaaa
tcaagtgaaaaagactcaagttccatcgattctcgttcttctcatagtcgtgttaaacca
caatcttcttatgggcatgaaacatcaagagccgaggcgattcagagagatccgctcctg
tctcagatactgccagagcaagtgccttcagatccagatgagccctttttcatcctctcc
ctgacggagatcccggtcccctcagcaggggaagtgggagcgagtggagcccagaacctc
tcttatcgtcccgcagcaggtgcatcgggacagcagccgagtgtttctgaggtgagtttg
aaagcagaagaaaaccatccagaagtttctcttgaacctaaagtcttcaagaactccatc
gctgggccgaatgaaaaagccggtgatgattcaggcgacaaggaaactcttctcagcagg
aaagccaaagtttccgaggcgagcgttgctgaaacgaggagttccgagtgtaggaaggca
gcaagtaagagaaatcagacgaaaactccaaccaaagcagaacagacatcttcaaaacct
acagcctccgcatcaaattctaatattcccagtcaaacagcagcagcagcagcagcagat
tgtgcgcatattggcctgaggtctacggctttaacttccccggaaagggagagcggcttt
gttgacaacgagcctacgagcgtgtcgcagtacttcctaagcgacatcttcacagaagtt
gatgagggataa
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integrated database retrieval system
