KEGG   Xiphophorus maculatus (southern platyfish): 102222341
Entry
102222341         CDS       T02923                                 
Symbol
kdm5a
Name
(RefSeq) lysine-specific demethylase 5A
  KO
K11446  [histone H3]-trimethyl-L-lysine4 demethylase [EC:1.14.11.67]
Organism
xma  Xiphophorus maculatus (southern platyfish)
Brite
KEGG Orthology (KO) [BR:xma00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:xma01009]
    102222341 (kdm5a)
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:xma03036]
    102222341 (kdm5a)
Enzymes [BR:xma01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.67  [histone H3]-trimethyl-L-lysine4 demethylase
     102222341 (kdm5a)
Protein phosphatases and associated proteins [BR:xma01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     102222341 (kdm5a)
Chromosome and associated proteins [BR:xma03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    102222341 (kdm5a)
SSDB
Motif
Pfam: PLU-1 JmjC KDM5_C-hel PHD ARID JmjN zf-C5HC2 PHD_5 Cas_Cas6_C
Other DBs
NCBI-GeneID: 102222341
NCBI-ProteinID: XP_014331525
Ensembl: ENSXMAG00000004521
LinkDB
Position
17:complement(13442238..13460656)
AA seq 1743 aa
MTCFPRIHFDMAAFAEFVPPPECPVFEPSWEEFSDPLGFINKIRPIAEKTGICKIRPPQD
WQPPFACDVRNFRFTPRVQRLNELEALTRVKLNFLDQIAKFWELQGSKIRFPHVERKILD
LYQLSKIVSSEGGFETVCKEKRWSKVATRMGFPPGKGTGSLLRSHYERFLYPYELFQSGA
TLTGVQRLYDEGADGEEVDEGVGEEAMEEDEQEEEDENDKEKEGDVTQTKDQLPSERRSR
RLKSERENKEPTSLKIFGTSPKMVGLEIVSAEDGFIKKQRHLKAQAFAIKMRPRKETLEV
NFIDLYFCLVCGRGDEEDRLLLCDGCDDSYHTFCLIPPLQDVPKGDWRCPKCVAEECSKP
REAFGFEQAVREYTLQSFGEMADHFKSDYFNMPVHMVPTELVEKEFWRLVSSIEEDVIVE
YGADISSKDVGSGFPIKDGKRRLLGDEEEYANSGWNLNNMPVLEQSVLTHINVDISGMKV
PWLYVGMCFSSFCWHIEDHWSYSINFLHWGEPKTWYGVPASAAEKLEAVMKKLAPELFDS
QPDLLHQLVTIMNPNVLMDHGVPVYRTNQCAGEFVVTFPRAYHSGFNQGYNFAEAVNFCT
ADWLPLGRQCVAHYRRLHRYCVFSHEELLCKMVADPENLDVELAAAVFKEMDDMIEEETK
LRQAVQEMGVLSSEQEVFELVPDDERQCYKCKTTCFLSALTCSCSPDRLVCLHHAKDLCD
CPLGSKCLRYRYGLEEFPSMLYGVKTRAQSYDTWAKRVAEALAADQKNKKDLIELKVLLE
DAEDRKYPENVLFRRLREMVKEAETCSSVAQLLLSRKQRHSSRLRSDSSRNRTKLTVDEL
KAFVEQLFRLPCIISQARQVKELLETVEDFHERAQVALSDEMPDSSKLQELLDLGSGLDV
ELPELPKLKQELQQARWLDEVRGTLAEPHRVTLELMKRLIDSGVGLAPHHAVEKAMAELQ
EVLTVSERWEDKARACLQARPRHSMVTLENIVLEARNIPAYLPNVLALEEALQKAKDWTS
KVEAIHSGSSYAYLEQLESLLARGRSIPVRLDLLGQVESQVASARAWRERTARTFLKKNS
TYTLLQVLSPRVDIGVYSNSKSKRKRVKELMEKERSGYDPDALSDLEENLEEARDPSAVV
AAFKAKEQKEVEAIHSLRAANLAKMAMADHIEEVKFCLCRKTASGFMLQCELCKDWFHGA
CVPLPKTGTQKKVGVSWQSNSKDSKFLCPLCQRSRRPRLETILSLLVSLQKLPVRLPEGE
ALQCLTERAMSWQDRARQALATEELSSALAKLSVLSQRMVEQAAREKTEKIINAELLKAA
ANPDLQGHIQTFQQSGFSRAASPRPSVDYDDEETDSDEDIRETYGYDMKDPGEVKPYLFC
DEEIPVKSEEVVSHMWPAATPSFCAEHAYSSASKSCVQNLSTPRKQPRKTPLVPRSLEPP
VLELSLQAKAQLEDLMMLGDLLEVSLDETQHIWRILQATHPPSEERFLQVMEPDNSLLEK
PLKIKFKDSEKKRKRKLERAEQHHLLMAAAGGAAAAAMGDMRLQKSKELKRVGLELGLGS
KPKKKKLKLNLEKNREMKQLAKRLAKEEKERKRKEKAAAKAEAIKDVLEKRKEKKILDIP
SKYDWSGAEDSNDENAVCAAKNCQRPCKDKVDWVQCDGGCDEWFHQVCVGVSCEMAENED
YICVDCSEKAAGAVDTVALEDVAGESIVVLSPCGTAAAMAPWSAVSLLNPAASHQQQEPR
QDS
NT seq 5232 nt   +upstreamnt  +downstreamnt
atgacttgtttcccccggattcacttcgacatggctgcgttcgccgagttcgttccccct
cccgagtgcccggtgtttgagccgagttgggaggaattctcggatcctttaggattcatc
aacaagatccgaccgattgcagagaaaacgggcatctgcaagatcagacctccccaggac
tggcagcctccgtttgcctgtgatgttcgcaacttccgcttcacacccagagtgcagaga
ctcaatgaacttgaggcactcactcgagtaaaactgaacttcctggatcagatcgcaaag
ttctgggagctgcaaggatccaagattcgtttccctcatgtagagagaaagattttggac
ctctatcagctcagcaagattgtgtcgtctgaaggcggatttgagacggtgtgcaaagag
aagagatggtccaaagtggcgactcgcatgggcttcccaccgggaaaaggcaccggttct
cttctacgttcgcattatgagagattcctttacccttatgagctcttccagtctggagct
acccttaccggcgtccagcggctgtacgatgagggagcagatggggaagaagtggacgag
ggtgtcggggaggaggcgatggaggaagacgagcaagaagaggaggatgaaaacgacaag
gagaaagagggtgacgtgactcaaaccaaagatcagcttccttcagagaggcgatccaga
cgactaaagtcggagagggaaaacaaggagcccacaagcctcaaaatcttcggaacgagt
cccaagatggtcggattggagattgtatcagctgaagatggatttattaagaagcagcgg
catctcaaagcccaggccttcgccattaagatgaggccacgcaaggagactctggaggtc
aactttattgatctttatttctgcctggtgtgcggacgaggcgacgaggaagaccggctg
ctgctgtgtgacggctgtgacgacagctaccacactttctgcctcattccacccctgcag
gacgtgcccaaaggagactggaggtgcccgaagtgtgtcgctgaggagtgcagtaagccc
cgagaagcttttggctttgagcaggctgtgagggagtacactctgcagagttttggcgaa
atggccgaccactttaagtccgactatttcaacatgccagttcacatggttccgacagag
ttggtcgagaaggagttctggcgcctggtcagcagcattgaggaggacgtcatcgtagag
tacggcgctgacatcagctccaaggacgtgggcagtggttttcctataaaggacggcaag
aggaggcttctgggagatgaagaggaatatgcaaactcgggctggaacttgaacaacatg
ccagtactggagcagtccgttctcacacacattaatgttgacatatcaggcatgaaggtg
ccctggctgtacgtgggcatgtgtttctcctcgttctgctggcacatcgaggaccactgg
agctactctatcaatttccttcactggggagaacccaaaacctggtatggagtgccggcc
tctgcagcagagaaactagaggctgtcatgaaaaagctggctccagagctttttgactct
cagccagacctcctgcatcagctggtcaccatcatgaatccgaacgtcctcatggatcac
ggcgtccccgtctaccgaaccaatcagtgcgcaggggagttcgtggtaaccttcccgagg
gcctaccacagcggcttcaaccagggctacaactttgcggaagctgtgaacttctgcacc
gcagactggctgccgttgggccgtcagtgtgtcgcccactaccgccgcctccaccgttac
tgcgtcttctcccacgaggagctcttgtgcaaaatggtggccgatcccgagaacctcgat
gtggagctggcggcggccgtcttcaaagaaatggacgatatgatagaggaggaaacgaaa
ctgaggcaggctgtccaggagatgggagtgctctcatcggagcaggaggttttcgaactc
gttccagacgacgagcgccagtgctacaagtgtaagacgacgtgtttcctgtctgcgctg
acgtgctcctgcagcccagataggctcgtctgtctccatcacgctaaggacctctgcgac
tgtcccctcggcagcaagtgtctccggtaccgttatggtctggaggagtttccgtccatg
ctgtacggtgtgaagacgcgggcacagtcctacgacacctgggccaagcgggtcgcagag
gcgttagcagcagaccagaaaaacaagaaagatctaatagagctgaaggttttgctggag
gacgccgaggacaggaagtatcccgagaacgttttgttccgccgcctgagggagatggtg
aaggaggcagagacgtgttcctctgtggcccagctgctgctcagccgcaagcaaaggcac
agcagccgccttcgttctgacagtagccgcaaccgcaccaagctgactgtggacgagctc
aaagctttcgtggagcagctcttccggctgccctgcatcatcagccaggcgcgacaagtc
aaagagttactggagacggtggaggacttccacgagcgagcccaggtggctctatccgac
gagatgcccgactcctccaagctgcaggagcttttggacctgggtagcggcctggatgtg
gagcttcctgagctgcccaagctaaagcaggagctgcagcaggcacgctggcttgatgag
gtccgtggcacccttgctgagccgcaccgcgtcactctggagctaatgaagcggctgata
gactctggagtcggcttagcgccgcatcacgctgtggagaaagcaatggcagagctacag
gaagtcctcactgtctcagagagatgggaggataaagcacgggcctgcctgcaggctagg
cctcgccacagcatggtgacgctggagaacattgtgctggaggcaaggaacatcccagca
tatctgcctaatgttctggctctggaagaggccctgcagaaggccaaggactggacctct
aaggtggaggccatccacagcggaagcagctatgcctacctggagcagctggagagcctg
ctggccagaggccgctccatccccgtgcggctcgatctgctcggacaagtggagtctcag
gtggcctcggctcgagcctggagggagcggaccgcccgcaccttcctcaagaagaactcc
acctacactctgctgcaggttctcagtcctcgtgtggacatcggcgtgtacagcaacagc
aagagcaagcggaagcgcgtcaaggagctcatggagaaggagcggagcggctacgacccc
gacgccctcagcgacctggaggaaaacctggaggaggcccgagacccctcggccgtggtg
gccgccttcaaagccaaggagcagaaggaagtggaggccatccactcgctccgcgccgcc
aacttagccaagatggccatggcggaccacatcgaggaagtcaagttctgcctgtgccgg
aagacggccagcggcttcatgctgcagtgcgagctgtgcaaggactggttccacggcgcc
tgcgtccctctgcccaagacggggacgcagaagaaagtgggcgtcagctggcagagcaac
agcaaagactccaagttcctgtgtccgctgtgccagagatcgaggagaccgagactggag
accatcctgtccctgttggtctctctgcagaagctgccggtgcgtctgccggaaggagag
gcgctgcagtgtttaacggagcgggccatgagctggcaggatcgagcacgtcaagctctg
gctaccgaggagctgtcctcggctctggcgaagctttccgtgctcagccagcgcatggtg
gagcaggcggcgagggagaaaaccgagaagatcatcaacgccgagctgctgaaagcggcc
gccaaccctgacctgcagggtcacatccagacctttcagcagtctggtttcagccgagcg
gcttcaccacggccgtctgtggactacgatgacgaggaaacggattcagacgaggacatc
agggagacttatggttacgacatgaaggacccaggtgaggtgaagccctacctgttttgc
gatgaagagatccccgtgaagtctgaggaggtggtcagccacatgtggcccgccgccacg
ccttcattctgcgccgaacacgcctactcgtcagcttccaagtcctgcgtgcaaaacctc
agcacacccagaaagcaaccgcgaaagacccccctggtgccccggagcctggagcccccg
gtgctggaactgtccctgcaggctaaggcacagctggaggacctgatgatgctgggagac
ctgctggaggtgtccctggatgagacccagcacatctggaggattctgcaagccacgcac
cctccctctgaggagagattcctgcaggtcatggagcctgacaactcgctgctggagaaa
ccgctcaaaatcaaatttaaagattccgagaagaagcgaaagcggaagctggagagagcc
gagcagcaccacctgctaatggccgccgccggtggcgccgccgccgccgccatgggagac
atgaggctgcagaagtccaaggagctgaaacgggtcggcctggagctcggcctcggcagc
aagcccaagaagaagaagctgaagctcaacctggaaaagaaccgggagatgaaacagctg
gctaagcggttggccaaggaggagaaggagaggaagaggaaggagaaggcagccgcgaaa
gccgaggccatcaaggacgtcctggagaagaggaaggagaagaagatcctggacatcccg
tccaaatatgactggtcgggcgccgaggactccaacgatgagaacgcggtgtgcgctgcg
aagaactgccagaggccgtgtaaagacaaggtggactgggtgcagtgcgacggcggctgt
gacgagtggttccaccaggtctgcgtgggcgtgtcgtgcgaaatggcggaaaacgaggac
tacatttgcgtggactgctctgagaaggcggcgggcgcggtcgacacagtggccctggag
gacgtggcgggggagagcatcgtggtcttgtctccgtgtggcacggcggcggccatggct
ccgtggtccgccgtgtccctcttaaatccggcggcttcacaccaacagcaggagcctcgg
caggacagctag

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