Xiphophorus maculatus (southern platyfish): 102222535
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Entry
102222535 CDS
T02923
Name
(RefSeq) dentin sialophosphoprotein-like isoform X1
KO
K12484
Rab11 family-interacting protein 1/2/5
Organism
xma
Xiphophorus maculatus (southern platyfish)
Pathway
xma04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
102222535
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xma04131
]
102222535
Membrane trafficking [BR:
xma04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
102222535
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2
RBD-FIP
DUF4635
Motif
Other DBs
NCBI-GeneID:
102222535
NCBI-ProteinID:
XP_023208075
LinkDB
All DBs
Position
19:21129363..21160396
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AA seq
1469 aa
AA seq
DB search
MSSLTVEEDQRWVPTHVQVTVLKGRGLRGKGKHGTSDVYTIIQLGKEKYSTGVAEKTTEP
EWREECSFELQPGVLESAERSGYPAGSNELVLTVMHRALIGLDVFLGQAVIQLDKLFHER
RYVKNDYSHEFETKGEPTALLLVTLWWPIASRWYRLNSKTGKKEKERGDIQVTILFTRNN
LTASMYDLVMKDKGASTFSKLKERMKGKRRSSDEESSSAVVPGGYSSLYRMRQRLPSDGG
GEEDYEDDEGGEVRRSKMRTFFLRGKLRKSSDTRSSTSLGSESSESSSRGGSLSPTAGIS
VVVSDLSNSPSNSSNFTADNSPEHTANISPKSSSLRCEFGDDAGEITIAVPPPTVCVNGS
HASKVQAQDRGSRKPSGSLGQGLLLQRSMAHSVSLQNLSTRPSAELPKGPAGDGRRWSFD
RAGEEERAAIAAALGQSGAGEEERPEPASLPDASQAEPESQVKKQRRNLFSHGRSESAGK
GQSQSKGESEQSATATEDKHRAWFGSKDSHNKPSLVVSTKLEPRTDPHPPPLPLSHHPPG
VPGDPTSLVSALHHTNPFSRSQTTPPPISQCNPFYSRLQHNPFFTEMLTNQTLKSPLPPL
PYLSSSRPPITDLFPQSSNPDLMQDSPTVKDTADAKDQPVERPLPPVPLVNKEPLIKKLS
NPFLSAEERNLDLEWDESFEAFAAGRLQSPEEFAMESRTQQNTVDDHPLEHDRSKDELQP
VPDANKQTNISDVLYDQPGGRFLSNELPLPIQMRNNNALHFDAFPQFLETIPEHRSFDSD
DSTLNTPTNSPEPTDFIVTEQDSNTTNDFTHTNINAAPFHISSAQLNNNSSSSPDPSSSG
LGSSTEEDVLSCFSSQSEKFSVSSSEEAESTVLHFKNSSDLTTVKTIKTSGSGDGIADKS
VDQFLIADSHKTVDQPEDSHAEMVGWNFLGDSFQPLSLTTSEKETESEPGGTQTPKTPDL
NPDLLQTLQPTSVVCQQSSNDGEEESKDCAIDPSEDFSARSKNSATEELMPASSDDEFSS
TLLSVPVIASSPEVKQDLLDVTNENTGSEAQKVRPYSHVEFGIFDEYLNVSHLASSPSQD
FDTAWLKIQTPEQSSNTLHRSHYFSADSQDYLTCDSHSFSNGSELNETLFSANSTRSGEM
SNIQAVPDDLFGMGHTNLSQSSNFEVNQNEIFGEFLQFHQGNLVNLETSLTGGDGLQVLP
APPPDSSSNPKIHSDIGEGNQNDIFLQSPQGQHAALQRSLSEGTLAPPLDQLFPSSFGSD
PCAIQESSFAQLDPVFPFPNTFAPSLIPESSSFHVAFSALSPLATISATEPPGSEPGATP
QPDVTKRRQAANQPSSPHPVKPLTTAMLAEEKRSVLATGLEKLKSTIHSGRSSQIAEQEA
DRKKALTEGAGSYYHLTHSELVALLVQREAELEGQRAEFERQKLLLAKREVELKKLKPQV
RDLEDYIDTLLVRIMEQKPTLLQVRPKFK
NT seq
4410 nt
NT seq
+upstream
nt +downstream
nt
atgtcctcactaaccgtagaggaggaccagaggtgggtaccgacgcacgtccaggtgacg
gtgctcaaaggcaggggcttgcggggcaagggcaaacacggcaccagcgatgtgtacacc
atcatccagctggggaaggagaagtactccaccggcgtggcggagaagaccaccgagccc
gagtggagggaggagtgctcgttcgagctgcagcccggcgtgctggagagcgccgagcgg
agcggatacccggccgggagcaacgagctagtcctgaccgtgatgcaccgggcgctgata
ggactggacgtgttcctcggtcaggctgtgattcagctggataaactatttcacgagagg
agatacgtcaaaaacgattacagccacgaatttgagacgaaaggggaaccaaccgctctc
ctcctggtgaccctgtggtggccaatcgcttcaaggtggtatagactcaactccaagacg
gggaagaaggagaaggagaggggagacattcaggtcaccatcttgttcacccgaaacaac
ctgacggccagcatgtacgacctggtcatgaaggacaagggcgcctccaccttcagcaaa
ctcaaggagcgcatgaagggcaaaaggaggtccagcgacgaggagtcgtcctccgccgtg
gtgccgggtgggtacagctccctgtaccgcatgcgccagagactgccgagtgacggaggc
ggggaggaggactatgaggatgacgaggggggggaagtccggcggagcaagatgaggacc
ttcttcctgcgggggaagctgcggaagtcgtccgacactcgctccagcacctccctgggg
tccgagagcagcgagtcgtcgtcgcgtggcggcagcctgagtccgacggccggcatcagc
gtggtggtgtctgacctgtccaactcccccagcaacagcagcaacttcactgcagacaac
agtccagaacacacagcaaacatttcgcccaagtcgtcctctctcagatgcgagttcggc
gacgatgccggcgaaatcaccatcgcagtgcctcccccgaccgtttgtgtaaacggaagc
catgcgtccaaagtccaggcccaggatcgaggctcaagaaaaccgtcaggttctttaggg
cagggactgctgctgcagcggtccatggcccactccgtttccctgcagaacctcagcacg
aggccctccgccgagctgcccaagggccccgcgggggacggccggcgctggtccttcgac
agggccggtgaggaggagagggcggccatcgcggcggccctggggcaaagtggggccgga
gaggaggagcggccggaaccggcatcactgccagacgcctcccaggcggagccagagagt
caggtgaaaaagcagaggaggaacttgttctcgcatgggcggagtgagtctgcagggaag
ggtcagagccagtccaaaggcgagtctgagcaaagcgccaccgccaccgaggacaaacac
agagcgtggttcggatccaaggactcgcacaacaaacccagcctggtggtctccactaag
ttagagcccagaactgacccccacccaccacctcttccacttagtcaccaccccccgggt
gtccccggtgatcctacctctttggtttccgcactgcaccacactaaccccttttcccgt
tcacagaccacaccgcctcccatatcccagtgcaaccctttctactcccgcttacagcac
aaccccttctttacagaaatgttaactaaccagacactgaagtcaccgctgcctcctttg
ccttatctttccagctcccggccccccataactgacctctttccacagtcaagtaatcct
gacttgatgcaagacagcccaacagtaaaggacacggctgatgccaaagaccaacctgtt
gagagacctctccctccagttcccttagtaaataaagaacctttaatcaagaagttgtca
aacccctttctgtctgctgaggagcgtaacctggacttggagtgggacgaatcatttgag
gcttttgcagctggcagactgcagtctcccgaggagttcgccatggaaagcagaacacag
caaaacacagtcgatgaccatccactggaacacgaccgtagtaaagatgaattacaacca
gtcccggatgcaaacaagcaaacaaatattagtgatgttctctatgatcagcctggaggc
agatttttatccaatgaacttccacttcctatccagatgaggaacaacaacgcacttcac
tttgacgcctttccacaattccttgaaacgatcccagaacacagaagctttgacagcgat
gactcgacgttgaacactcctactaactcccctgaaccgactgatttcattgtgaccgaa
caggacagcaacactactaatgattttacgcacactaatatcaatgctgctccctttcac
atctcatctgcacaactcaacaacaacagcagcagctctccagaccccagctcatcgggc
ctcggcagttcgaccgaagaagacgtgctctcctgtttttcatctcagtctgagaaattc
tctgtgtcgtcctctgaggaagcggaaagcaccgtccttcacttcaagaattcctccgac
ttgactactgtaaaaaccataaagacctcagggtctggagacggcatcgctgacaagtcc
gttgatcagtttttgattgctgattcacataaaactgtcgatcaaccagaggatagtcat
gccgaaatggttggttggaactttttaggggactcgtttcagcctctttctctgacgacg
tcggaaaaggaaacagaaagtgaacctggaggtactcaaacacctaaaactcctgatctg
aaccctgatctgttgcagacactacaaccgacgtctgttgtgtgtcagcaatcaagcaat
gatggtgaagaagaaagtaaagattgcgctatcgatccttctgaggatttcagcgctcgt
tctaagaacagtgccacggaagaattgatgcctgcttcttcagacgatgaattctcttcc
acactactatcggtacctgtcatagcctcatcccctgaggtcaaacaagatctgttggat
gtgaccaatgagaacactggttctgaggcgcagaaagttcgcccttattctcatgtggaa
tttgggatttttgatgaataccttaatgtcagtcaccttgcaagcagtcctagccaggat
tttgacaccgcttggttgaaaatacagacccctgaacagagtagcaacaccttacaccgt
agccattatttcagcgctgactcgcaggactacttaacctgtgattctcactcattctcc
aacgggtcagagctgaatgaaactctattctcagctaactctactcgcagtggtgagatg
agcaacattcaggcagtccctgatgatctttttggaatgggtcatacaaatctatcgcag
tcatcaaactttgaggtcaaccagaatgaaatatttggagaatttctccagttccaccaa
ggcaacttggtgaacctcgagacaagcctgacagggggcgatggattacaggttctgcct
gccccaccgccagacagcagctctaatccaaagatccacagtgacataggggagggaaat
cagaacgacatcttcttacagtctccacaggggcagcatgccgcgctgcagcgctccctt
tccgaggggacgctggcacctcccttggaccaacttttcccgtcctctttcgggagcgat
ccctgcgcaatacaggaatcctcctttgctcagctagaccctgtcttccctttccctaac
acatttgctccttctctaattcctgaaagcagtagcttccatgtagcgttctctgccctc
tctcccctcgcaaccatttcggcgacagagccacccggctcagagcccggtgccacgcca
cagccggatgtgaccaagcggcggcaagcggccaatcagccgagcagcccccacccagtg
aagcccctgaccactgccatgctggctgaggagaagcggtcagtgctggccaccggcctg
gagaagctcaagtccaccatccattcggggaggagcagccagatcgccgagcaggaggca
gacaggaagaaggctctgaccgaaggagcgggctcgtactaccacctgacccacagcgag
ctggtggccctgctggtgcagcgcgaggccgagctggaggggcagagggccgagttcgag
cgtcagaaactgttgctggccaagcgggaggtggagctgaagaagctgaagcctcaggtc
cgagacctggaggactacatcgacactctgctggtgcgaatcatggagcagaagccaacg
ctgctacaagtgcgccccaagttcaaatga
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