Xiphophorus maculatus (southern platyfish): 102222603
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Entry
102222603 CDS
T02923
Name
(RefSeq) fragile X mental retardation syndrome-related protein 1-like isoform X1
KO
K15516
fragile X mental retardation protein
Organism
xma
Xiphophorus maculatus (southern platyfish)
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xma03019
]
102222603
Messenger RNA biogenesis [BR:
xma03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
102222603
Factors involved in mRNA localization
Other mRNA localization factors
102222603
mRNA cycle factors
Stress granule specific factors
102222603
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FXMRP1_C_core
KH_9
Tudor_FRX1
FXR_C1
KH_1
Agenet
KH-I_KHDC4-BBP
DUF150_C
Motif
Other DBs
NCBI-GeneID:
102222603
NCBI-ProteinID:
XP_005800098
Ensembl:
ENSXMAG00000011669
UniProt:
M4AB72
LinkDB
All DBs
Position
14:3017094..3037631
Genome browser
AA seq
669 aa
AA seq
DB search
MDGLAVEVRGSNGAFYKGFIKDVHEDSLTIVFENNWQPERQLPFSDVRLPPPADYHKDIG
EGEEVEVYSRANEQEPCGWWLARVRMMKGEFYVIEYAACDATYNEIVTSERIRPLNPNSP
ASRNTFHKMTIPVPEDLRDICASDDIHKDFRKAIGANCIFYSAQTHDLIVLSTNDTTVKR
ATLLSDMHFRSIRTKLILMSRNEEATKHLETSKQLAAAYQEEVRVREDLMGLAIGSHGAN
IQQARKVPGVTAIELEEESCTFRIYGETPEAVKQAREYLEFKEDYFQVPRNLVGKVIGKN
GKVIQEIVDKSGVVRVRIEGDNDKKLPREEVGRQGAGRDDTASSKEGMVPFVFVGTKENI
SNAQALLEYHVSYLQEVEQLRLERLQIDEQLRQIGVGYRVAPSRPAGPGGDREKGYMTDE
SSNSLHASRTYGGRGRGRRPSNTQYSGYGTNSELSNASESEDVNDRDLRPRGIGGDERGS
RRGGRGRGANSGRGRGGPAAKPSNSISSVLRDPDSNPYALLEGEGELADADLSEGTVGDR
HRRSRRRRNDQEPSVMDAATESDNQAGPSENGLDEEARPQRRNRSRRRRNRGSRPEGGSA
SRDRQPGESVTVADYISRPESQSRQNLPQKENHSGPEPKENGTSAKKEERTPSKRSPSKE
TPTLVNGVS
NT seq
2010 nt
NT seq
+upstream
nt +downstream
nt
atggacggactggccgtggaggttcgcggctcgaacggggccttctacaagggttttatc
aaagatgtccatgaagactcactcactattgtatttgaaaacaactggcagcctgagaga
cagctgccgttcagcgacgtgcggctgcctcctccagccgactaccacaaagacatcggc
gaaggcgaggaggtggaggtctactccagggccaacgagcaggagccgtgcgggtggtgg
ttagcacgggtcaggatgatgaagggggagttttacgtaatcgaatacgcagcttgcgat
gccacatacaacgagattgtcacgtcggagcgcatcaggcctctgaaccccaacagcccc
gcctctcgaaacacgttccacaagatgaccatccccgtcccggaagacctgagggacata
tgtgcaagtgatgacattcacaaagacttcagaaaagctatcggagccaactgcatcttc
tacagcgctcaaacacatgatctcattgtcctgtctacaaatgacacaacggtaaagcgt
gcaacactcctgagtgacatgcatttccgcagcatccgcaccaagctcatcctaatgtcc
cgcaacgaagaagccaccaaacatttggagaccagtaagcagctagcagcagcgtaccag
gaagaagtccgagtcagagaggacctgatgggcctcgccattggttcccacggtgccaac
atccagcaggccaggaaggtgcctggagtgacggccatcgagcttgaggaggagagctgt
accttcaggatctacggagagactcctgaagctgtgaagcaggcgagagaatatctggag
ttcaaagaagattacttccaggttcccaggaacctcgtaggcaaagtcatcggaaagaac
ggcaaagtcatccaggagatagtggacaagtcgggcgtggtccgcgtccggatcgaggga
gacaacgacaaaaagcttccccgggaggaggtaggcaggcagggggctggcagagacgac
actgccagcagcaaagagggcatggttccctttgtgtttgttggcactaaggaaaacatc
agcaatgctcaggccttgttggagtaccatgtgtcctacctgcaggaggtggagcagctg
cgcctcgagcgcctccagattgacgagcagctccgtcagatcggggtgggataccgtgtg
gcccccagccggcccgctgggcccggcggcgaccgggagaaaggttacatgacggacgag
agcagcaactctctccacgcatctcgtacgtacggcgggcgtggccgaggacgaagaccc
tccaatacccagtactctggatacggcacaaactccgaactgtcaaatgcttccgagtcg
gaggacgtcaacgaccgcgacctgaggccccgtggcatcggtggggacgagagaggctcc
agacgaggaggcaggggccgaggtgcaaactcgggacgggggcgcgggggccccgcagcc
aagccctccaactcaattagctcagttctgagggatccagacagcaacccgtacgctctg
ctggagggagagggcgagcttgcagacgccgacctcagtgagggcacggtgggggaccgc
cacagacgctcccgccggcgccgtaacgaccaggagcccagcgtgatggacgccgccaca
gagtcggacaatcaggccggccccagtgagaacggactagacgaagaagctcgacctcag
cgccgcaaccgaagccgccggcgccgtaaccgcggcagccggccagagggagggtccgcc
agtcgtgacaggcagccgggagaaagtgtgaccgtagccgactacatatcccgtcctgag
tcccagagccgacagaacctgcctcagaaggagaaccactctggacctgaacccaaggag
aacggaaccagtgcaaagaaggaggagcgaacgccctcaaagcgttctcctagcaaagag
acgccgactttggtcaatggggtctcataa
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