Xiphophorus maculatus (southern platyfish): 102222945
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Entry
102222945 CDS
T02923
Symbol
l1cam
Name
(RefSeq) neural cell adhesion molecule L1 isoform X1
KO
K06550
L1 cell adhesion molecule
Organism
xma
Xiphophorus maculatus (southern platyfish)
Pathway
xma04514
Cell adhesion molecule (CAM) interaction
xma04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
102222945 (l1cam)
04517 IgSF CAM signaling
102222945 (l1cam)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
xma04515
]
102222945 (l1cam)
04090 CD molecules [BR:
xma04090
]
102222945 (l1cam)
04091 Lectins [BR:
xma04091
]
102222945 (l1cam)
Cell adhesion molecules [BR:
xma04515
]
Immunoglobulin superfamily
L1 family
102222945 (l1cam)
CD molecules [BR:
xma04090
]
Proteins
102222945 (l1cam)
Lectins [BR:
xma04091
]
I-type lectins (Siglecs)
102222945 (l1cam)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ig_3
I-set
fn3
ig
Ig_2
V-set
Ig_VEGFR-1-like_5th
Ig_5
C2-set_2
Bravo_FIGEY
FN3_DSCAM-DSCAML_C
Pur_ac_phosph_N
VEGFR1-3_N_Ig-like
V-set_CD47
Ig_PDGFR_d4
Fn3_ROS1
Fn3_VIN3
Motif
Other DBs
NCBI-GeneID:
102222945
NCBI-ProteinID:
XP_005801423
Ensembl:
ENSXMAG00000010902
LinkDB
All DBs
Position
1:14917129..14968540
Genome browser
AA seq
1272 aa
AA seq
DB search
MPHMQRQQVCSRGQSSSHLLPLVLALLSLAALPSRAAIEMSSNWDNKRPPQITTHPESVT
VFSTEDLVMKCEASGVPMPSFSWTKNGKPFDPSADTELNVTKSFGLFAFSTLSKTMDTLK
PYQGKYVCYATNELGTAVSKEAILKTDVAPTQQKQKEKAVTAKSDEGSSIVLKCNPPQSS
MEPIIHWMDQKMHHIQLSKRVVVGKDGNLYFAHLTMDDSRDDYTCNVQYMVTRTILAQEP
ITLKVNPSNSVVRNRRPHMMRPAEAESTYQALRGQTIELECIVQGLPTPEITWLKKEGEL
DESRTFRDMFDRLLRLSDISESDSGEYQCIAKNTQGNAKHTYHLKVEAAPYWKVIPKSLI
YAPGEMVRLDCAAEGTPSPTISWTRNGEEISGTDSRHTVIEKNASLILNTVDFEDTAVYQ
CRASNKHGTILTNTYVYIIELPPQIITDDRKVYAVTEGKSASLECETFGSPKPKVIWERA
SYLLDDPRLQPLPNGGLQIINVSHDDEGPYACSVQNSNLSIIAELEVFNRTVILTPPRNQ
KVQPGNTAIFTCVGLYDTRLRIPQIQWRKNNQKLMESPSDEKYTFDGAEFIIANVEQDDE
GIYTCEIISSLDKVEASATLTLCDRPDPPSLLQISDPRHRAISLRWTPGDDHKSAVLEYV
IEFEDQDLKERGWEELKRVSGNQEHAVLSLWPYMSYRFRVIAINEVGKSDPSKPSEIHNT
PAEAPDNNPENVRSESINPNTLLITWEKMDKRNFNGAEFKYKVLWRRSVGSGPKWHERET
TEPPVIVDDVGNFSAFEIKVQAFNTIGYGPEPDPVIGYSGEDVPLEAPIGVGVELLNSTT
VAVTWAAIEIESVRGHLLGYKIYLRRMGSRSHHHSRRSTEAESTVVEETGPNEKMKIISN
LRPYSRYLLFVAVFNNKAEGPHSEPLPFDTKEGVPGPPTSLILDSPSETEMTLHWTPPAH
PNGILTGYLLQYQRITESDDGPLQKDEIDNPTVTQFTLKGLDRHSQYRFYLRGLTDAGKG
EPIMMTGATTLDGVPPSDISLSVGETSVNVSWEAQKRHRNVGFYIHYFKKNGGWKKSERV
NSSQSFYQLRGLVPGSDYLLRFFYGNASFWETGIKTEGTEMTEVQASIATQGWFISVVSA
LALLLLILLILCFIKRSKGGKYSVKDKEDGPMDSEARPMKEETFGEYRSLESDLEEKCTA
SQPSLCEDNKMCSEDTLNINGSSALTTELNLDESLASQISRPSEGPEGFSLLNPATIAPT
TNGMPNAITILD
NT seq
3819 nt
NT seq
+upstream
nt +downstream
nt
atgcctcacatgcagcgacagcaggtttgcagtagggggcagagctcctcccacctcctc
ccccttgtcctagccctcctttccctcgcagccctgcccagccgggcagccatcgaaatg
tcctccaactgggacaacaaaaggcctcctcagatcaccacacacccggagtctgtcaca
gtttttagcaccgaggacctcgtcatgaagtgtgaagcctctggtgtcccaatgcccagt
ttcagttggactaagaatggaaagccatttgacccaagtgctgacacagagcttaatgtt
acgaaaagctttggtttgtttgccttctccacactcagtaaaactatggacaccctgaaa
ccgtaccaaggcaaatatgtctgctacgccaccaacgagctcgggacggctgtgtcgaag
gaagcaatcctcaaaactgatgttgcccctacccagcagaagcagaaggagaaggcggtt
actgcgaagtctgatgaggggagcagcatcgtgctgaagtgtaacccccctcagagctcc
atggagcccatcattcactggatggatcagaagatgcaccatatccagctgagtaagcgg
gttgtggttggaaaggacggcaacctttactttgctcatttgacaatggatgacagccgg
gacgactacacctgcaacgtccagtacatggtgacacgcaccattctggcccaggagccc
atcactctgaaggttaacccctccaattcggtggtgcggaaccgtagaccacacatgatg
aggcctgctgaagccgaaagcacgtaccaggccctcaggggccagacgatagaactcgag
tgcatcgtacaaggccttccaactcctgaaattacgtggctgaagaaggaaggtgagctg
gatgaatcccggacattcagagacatgtttgaccggctcctgcgcctcagtgatatctct
gaaagtgacagcggcgagtaccagtgcatagccaagaacacacaagggaatgccaaacac
acctaccatctgaaagtagaagctgctccatattggaaagtgatcccaaagagtctgatc
tatgctccgggtgaaatggtaaggctagactgtgcagcagagggtacgccctctccgacc
atcagctggaccaggaacggagaggagatctcaggaactgactccagacatactgtgata
gagaaaaatgcatcattgatcctaaacactgtcgactttgaagacacagctgtctaccag
tgcagggcctccaacaaacacggcaccatcctcaccaacacctatgtatacatcatcgaa
ctgcctccgcagatcattacagatgaccggaaagtgtacgctgttactgaaggcaagagt
gcttccctggagtgtgagacctttggctctcctaaacctaaagtcatatgggagcgagca
tcgtaccttctggatgatcccagacttcagccacttcccaatggagggcttcagatcatt
aatgtcagccatgacgatgaaggtccctacgcctgctcagttcaaaactccaacttgtca
atcatagccgagctggaggtgttcaacaggacagtgatcctgacaccgcctaggaaccag
aaagtgcaacctggaaacacagcaatctttacatgtgtgggcctttatgatacaagactg
aggattcctcaaattcagtggagaaagaacaaccagaaactgatggaatcccccagtgat
gaaaaatacacatttgatggggcagaattcataatcgctaatgtggaacaagatgatgag
ggcatttacacctgtgagatcatctcttctctggacaaggtcgaagccagcgccacgctc
actttatgtgatcgtccagaccctccaagcctcctccagatctctgatcccaggcatcgt
gcaatctctctcaggtggactcctggagatgaccacaagagcgctgttctagagtatgtc
atagagtttgaggaccaagatttgaaggagaggggttgggaagagctgaagagagtcagc
ggcaaccaggagcacgctgtcctctccctctggccttacatgtcctaccgttttcgggtc
atcgctatcaatgaggtgggaaagagtgaccctagcaaaccctctgaaatccacaacacg
ccagccgaagctccagacaacaacccagagaatgtcaggagtgagtccataaacccaaat
actctcctcatcacctgggagaaaatggacaaacgtaatttcaatggagccgaattcaag
tacaaggtgctgtggagacgatcagtgggcagtggacctaagtggcacgagagggaaaca
accgagcctccggtcatcgttgatgatgttggcaatttctctgcttttgaaataaaagtc
caggccttcaatacaattggttacgggccggagccagaccccgttattggctactcaggg
gaggatgttcccctggaagctccgataggcgtgggagtcgaactactcaacagcactacg
gttgccgtgacctgggcagctatagaaatagagtcggtgagaggacacctgctgggatac
aagatttacctgagaaggatgggctccaggagccaccaccatagccggagatccacggag
gctgagagcactgtggtggaagagactggtcccaacgagaaaatgaagatcatcagtaat
cttagaccgtactccagatatctcctgtttgttgccgtcttcaacaataaggcggaggga
ccgcactctgagcctctgcccttcgacacaaaagagggagtacccggtcctcccacatcc
ctgatccttgacagcccatcagagacagaaatgaccctgcactggacgcccccagcccac
cctaatgggatccttactggatacctgcttcagtaccagcgcattacagagagcgatgac
ggccctttgcagaaggatgagatagataaccccacagtcacccagtttaccttgaagggc
ctggaccgccacagccagtaccgcttctacctgaggggcctcactgatgctgggaaggga
gagcccattatgatgacgggggccaccacacttgatggagttcctccctcggacatcagc
ctgtctgtgggggaaacctctgtaaatgtcagctgggaagctcagaagagacacaggaat
gttggtttctacatccactacttcaaaaagaatggcggctggaaaaagtctgagagggtg
aactcttctcagtctttctaccagcttcggggcctggttcctggttctgattatcttctg
cgcttcttctatgggaacgcctcattctgggagactggcatcaagacagaaggaacagaa
atgacagaggtgcaggccagcattgcgacgcagggctggttcatcagtgttgtgagtgcc
cttgcgttgctgttgttgatattgcttatcctctgcttcatcaagaggagtaaaggaggg
aaatactcagtgaaagataaagaggacggcccgatggactcagaggcacggccgatgaag
gaggaaacgtttggagagtacagatctcttgaaagtgatctggaggaaaagtgcacagcc
agccagccgtccctgtgtgaagacaacaagatgtgcagcgaggacaccctgaacattaac
ggcagcagtgctctgaccacagagctcaacttggatgaatctctggccagccagatcagt
cgtccaagtgaaggtccggaggggttctccctgctgaaccccgcgaccattgccccaacc
actaatggcatgcccaatgcaatcactattctcgattaa
DBGET
integrated database retrieval system
