Xiphophorus maculatus (southern platyfish): 102222975
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Entry
102222975 CDS
T02923
Symbol
xrcc6
Name
(RefSeq) X-ray repair cross-complementing protein 6
KO
K10884
ATP-dependent DNA helicase 2 subunit 1
Organism
xma
Xiphophorus maculatus (southern platyfish)
Pathway
xma03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
102222975 (xrcc6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
xma03041
]
102222975 (xrcc6)
03400 DNA repair and recombination proteins [BR:
xma03400
]
102222975 (xrcc6)
Spliceosome [BR:
xma03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
102222975 (xrcc6)
DNA repair and recombination proteins [BR:
xma03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA-PK complex
102222975 (xrcc6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku_N
Ku
Ku_C
SAP
Rho_N
SAP_new25
VWA_2
VWA
Fan1_SAP
Motif
Other DBs
NCBI-GeneID:
102222975
NCBI-ProteinID:
XP_023196099
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All DBs
Position
10:22299931..22306611
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AA seq
610 aa
AA seq
DB search
MAEWNAYYQNEDEEQEQEEAELSGGDYKVSGRDSLVFLVDASKEMFIKGEDGQPSNFDMT
MQVVRSVYTSKIISSHRDLVALVFYGTEQSKNPRNSFKHVYVYHDLDEPGAKRVQDADAL
RGEKGAQLAAEALGSGETSLGDALWCCANLYSDIKLRLSHKRLMIFTCRDDPHGGDGARD
RQARTKASDLKETGVLIDLMHLTKPGGFDVSLFFRDIVSPPDDDGELGLQLEPCDKLEDL
QKRVRARETKKRALARLSLTLGEGLNVAVGVYATAVTARKPASVRLYRETNEPVRSKTRI
FHTQTGSLLLPSEIKKAQVYGRKQIVMEKDEVDAIKKFHDPGLFLIGFKPMEKLKLHHHI
RPSVFIYPEEDEVKGSACLFSALLKKCIERNVFALCRSVFRRNYPPRFVALVPQMEAVDE
GKVQITPPGFNVIYLPYADDLRTLDPPRCPPASQTQVNKMKEIVQKLRFKYRSDAFENPV
LQQHFRNLEALALDMMAPEDIEDLIMPKVDQIDQRLGPLADEFKDLVYPAGYNPESKPAP
KRKTADAGAGAEKKPKVGATADELKAHMQSGTLGKLTVPVLKEACKQFGIKTTGTKKQDL
IDALSERLGS
NT seq
1833 nt
NT seq
+upstream
nt +downstream
nt
atggcggagtggaacgcttactaccagaatgaggacgaggagcaagagcaagaggaagcg
gagctgtctggaggagattacaaagtctcgggcagagacagcctggtcttcttggtcgac
gcctccaaggaaatgttcatcaaaggcgaagatggacaaccctctaactttgacatgacc
atgcaggtcgtgcggagtgtgtacaccagcaagatcatcagcagccaccgggacctggtg
gccctggtgttctacggcacagagcagagcaagaaccccaggaactcgttcaaacacgtt
tacgtgtaccacgacctcgacgaaccaggtgcgaagcgggtccaggacgcggatgctctg
cggggcgagaaaggcgcgcagctcgcagcggaggccctggggagcggggagacgtctctg
ggcgacgccctgtggtgctgcgccaacctctacagcgacatcaagctgcgcctctcgcac
aaacgcctcatgatcttcacctgcagggatgatccacacgggggcgacggcgccagggac
cgacaggcccgcactaaagccagcgacctgaaggagacgggtgtccttatcgatttaatg
cacctgacaaaaccgggcggcttcgacgtgtcgctcttcttccgggacatcgtgagcccg
cccgacgacgacggcgagctcggcctgcagctggagccgtgcgacaaactggaggacctt
cagaaacgggtccgggccagagagaccaaaaagagagccttggccaggttaagcttgact
ctcggtgagggtctaaacgtagcggtgggcgtgtacgcaaccgcggtgacggctcggaaa
cccgcctccgtcagactgtaccgggaaaccaacgaaccggtgcgcagcaaaacccgcatc
ttccacactcagaccggcagcctgctgctgcccagcgagataaagaaggcccaggtgtac
ggtaggaaacaaatagtgatggagaaggatgaagtggatgccatcaagaagtttcacgac
cccggactgttcctgatcggatttaagccgatggaaaaactcaaactgcatcatcacatc
cgaccttctgtcttcatctaccccgaggaggacgaagtgaaaggaagtgcctgtctgttc
tctgccctgttgaagaagtgcatcgagagaaacgtgtttgctctgtgtcgctctgtcttc
cgccgaaactacccacccaggtttgttgccttggtgcctcagatggaagcggtggacgaa
gggaaggtccagatcacacctccaggtttcaatgtcatctacctgccgtatgccgacgac
ctgcgaactctcgatcctcctagatgtccgccggcctcacaaacacaggttaacaagatg
aaggagatcgtccagaagctccgcttcaaatacaggagtgatgctttcgagaacccagtc
ctccagcagcacttcaggaacctggaggccctggctctggacatgatggccccagaggac
atcgaggatctcatcatgccaaaagtggaccagattgaccagcgactcggccctctggca
gatgagtttaaggatctggtctaccctgccgggtacaacccagagagcaaaccagctccc
aaacggaaaacggccgacgccggagccggggccgagaagaagcccaaagtgggggcgacg
gcggacgagctgaaggcccacatgcagagcggcactctgggaaagctgaccgtgccggtg
ctgaaggaggcctgcaagcagtttggaatcaaaaccaccgggaccaagaagcaggatctg
atagacgctctgagcgagcgactgggttcatga
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