KEGG T02923: 102223038

Xiphophorus maculatus (southern platyfish): 102223038

Entry

102223038         CDS       T02923

Name

(RefSeq) vesicle-trafficking protein SEC22b

K08517

vesicle transport protein SEC22

Organism

xma Xiphophorus maculatus (southern platyfish)

Pathway

xma04130

SNARE interactions in vesicular transport

xma04145

Phagosome

Brite

KEGG Orthology (KO) [BR:xma00001]
09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04130 SNARE interactions in vesicular transport
    102223038
09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    102223038
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:xma04131]
    102223038
Membrane trafficking [BR:xma04131]
SNARE
  VAMP, Ykt6, Sec22 (R)
   Sec22
    102223038

SSDB

Motif

Pfam:

Longin Synaptobrevin RIFIN Sec20 DUF3785

Other DBs

NCBI-GeneID:

NCBI-ProteinID:

Ensembl:

UniProt:

LinkDB

Position

6:complement(3418621..3421929)

AA seq 215 aa
MIFLTVIARLADGLPLAASIQEDEQSGRDLQHYQSQAKQLLRKLDAQSPDRCMLEAGNMN
FCYFISQGVCCLCLCDASFPKKMAFGYLEDLHNEFCEQYGKRVPAVTRPYSFIEFDTYIQ
KTKKSYVDSRARRNLSSVSTELQDVQRIMVANIEEVLQRGEALSALDTKASNLRSQAEKY
RSDARFLNTRSTYAKVAAVVLVFVTLIIYVRFWWL

NT seq 648 nt +upstreamnt +downstreamnt
atgatcttcctgacggtaatcgctcggctggcggacggtctgccgctggctgcgtccatc
caggaagatgaacagtcaggaagagacctccagcactaccagagtcaggccaagcagctg
ctccggaaactcgacgctcagagcccggaccgctgcatgctggaggctgggaacatgaac
ttctgttacttcatatcccagggtgtttgctgcctgtgtctctgtgatgcctctttcccc
aaaaagatggcttttgggtacctagaggacctccacaatgaattctgtgagcagtacgga
aagagagtccctgcagtgacgaggccatactccttcatagagtttgatacgtacatccag
aaaacaaagaagtcttacgttgacagcagggctcggaggaacctgagcagcgtcagcacg
gagctgcaggacgtccagagaattatggtggcaaatatcgaggaagtcctgcagagagga
gaagctctttctgctttggacaccaaggccagcaacctgcgcagccaggccgagaagtac
cgcagcgacgccaggttcctcaacacccgctccacctacgctaaagtcgctgccgtggtt
ttggtcttcgtgacgctcatcatctatgtgcgcttttggtggctttga

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