Xiphophorus maculatus (southern platyfish): 102223070
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Entry
102223070 CDS
T02923
Name
(RefSeq) nucleolar transcription factor 1-like isoform X1
KO
K09273
upstream-binding transcription factor
Organism
xma
Xiphophorus maculatus (southern platyfish)
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xma03000
]
102223070
03021 Transcription machinery [BR:
xma03021
]
102223070
Transcription factors [BR:
xma03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
UBF
102223070
Transcription machinery [BR:
xma03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
UBF
102223070
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box_2
HMG_box
HSNSD_N
Motif
Other DBs
NCBI-GeneID:
102223070
NCBI-ProteinID:
XP_023197288
LinkDB
All DBs
Position
10:4772872..4781052
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AA seq
519 aa
AA seq
DB search
MKMSEAAIEDGESGAESTGWTQENLQKLVASLKGTVPENNKTQTYGHGLKAVDWDKVAFP
PFSAGECQEKWNSLMKKMRRCRSLPDLLDEAEDLLSNPFCDKNIHPDLPKPPDPPKIAYI
RKKMTRYARKNPEVNVRLMRKTFSKKYEKLSDEKKAKYAKKYSVAFEEYNRNIRTFCKDN
NLHLPIKNENEKEKEKKKKEKKKKKEKENEKKKKKGRIFPKDEGEGCSKYKSLPQKPPGN
GYILFLIEHSAAGKGGETSHGASFIRVMSQHWKELSENEKQKYNKRCAEMKKNYEETLMN
YLGKLNKKEKKQIIEEKGIKIPKKTPDRHIRLPGEPKMPPQSGFIYFHSDMLKHAWKFIP
RKERMARAKKEWHELSEGEKNRYAEIIEENMRKYTEELRVWFQTLTQKDQRVYVKKKPDK
VIFLLEHIDAIKDSHYLSSDVKDEKTRRTKGRRRKKKLLRANLKRMATRLRRIIDYKSRW
RILNQLVSMMDARKKTPPRRGGAVLTLCRVADAELKFMH
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatgagcgaagcagcaattgaagatggtgaatcaggggctgaatctacaggatgg
acgcaggaaaacctccagaagctcgttgcttctctgaaaggcaccgtcccagagaataac
aaaacgcagacttatggtcatggattgaaagctgtagactgggataaagttgcattcccg
ccgttttctgcaggtgaatgccaggagaaatggaacagcctgatgaagaagatgcgcaga
tgtcgcagccttcctgatctccttgatgaagctgaagatttgctttcaaaccccttctgt
gacaaaaatattcacccagacctcccaaaaccgcccgatcctccaaaaattgcttatatt
aggaagaaaatgaccaggtatgcgaggaaaaatccagaggtgaacgtacggttaatgaga
aagaccttttccaagaagtatgaaaaactctcagacgaaaagaaagctaaatatgcaaag
aagtacagcgttgcgtttgaagaatataacagaaatatacggaccttctgcaaagacaac
aatctacatcttcctatcaagaatgagaatgagaaggagaaggagaagaagaagaaggag
aagaagaagaagaaggagaaggagaatgagaagaagaagaaaaagggaaggatcttccct
aaagatgaaggtgaaggatgcagtaaatacaaaagtcttcctcagaaaccacctgggaat
ggttatattctgttcctcatagaacactctgcagcaggcaaaggaggcgagacttcacat
ggagcgagttttattcgggttatgagtcaacactggaaagaattgagtgaaaatgagaaa
cagaagtacaataaacgctgtgccgagatgaagaaaaactacgaagaaacgctgatgaac
tatctgggtaagttaaataagaaggagaagaagcagatcattgaggaaaaaggaatcaaa
atcccaaagaagactccggaccgacacatcagactaccgggtgagccgaagatgcccccc
caatctgggtttatatattttcactcggatatgttgaaacatgcctggaaatttatacca
agaaaagagcgtatggcaagggccaagaaagagtggcacgagctctcagaaggggagaag
aatcgatacgctgaaataattgaggaaaatatgagaaaatacacagaagagctgcgagtg
tggttccagacgctgactcaaaaggatcagagggtttacgtgaagaaaaaacctgataag
gttatttttctcctggaacatatagacgccataaaggattctcattacctatcttcagac
gtaaaggatgagaagacaaggagaacgaaaggacgtagaagaaagaagaaattgttgaga
gcgaacctaaaaaggatggcaacacgtttgaggcgtatcattgattacaaatccagatgg
aggattctcaaccaactggtttctatgatggacgccaggaagaaaacgccacccaggaga
ggcggtgctgtgttaactctctgcagggtggcagatgcagagctgaagttcatgcactga
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