Xiphophorus maculatus (southern platyfish): 102223151
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Entry
102223151 CDS
T02923
Name
(RefSeq) inverted formin-2-like isoform X1
KO
K23958
inverted formin-2
Organism
xma
Xiphophorus maculatus (southern platyfish)
Pathway
xma04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
102223151
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
xma04812
]
102223151
Cytoskeleton proteins [BR:
xma04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Formins
102223151
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FH2
Drf_FH3
Drf_GBD
FH3_FHOD1-3
Hepsin-SRCR
WH2
DUF1548
ALMT
Motif
Other DBs
NCBI-GeneID:
102223151
NCBI-ProteinID:
XP_023203949
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All DBs
Position
15:4404604..4420949
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AA seq
1162 aa
AA seq
DB search
MASRTKWDAVKEQVTKGSDDDPDGSLEANLENADPELCVRLLQVPTVVNYSGLRRRLEKS
DKSWMVQFLELQGLDLLMGALERLSGRGCARIPDALLQLTCVSCIRSVMNSSAGLNFILD
NEEGYIRTLAQALDTSNVMVKMQVFELLAALALFDPQGRHLTLDAFENYKVLKKQQYRFS
VIMNELQATDCVPYMVTMMAAINVLILGQEDLRKRHRLRHEFIGLQLLDLLPKLRETEDM
DLNVQCDAFVDSMADDEEEMERLYGGIDMSNHQEVFSSLFTKVSSCPSSVQLLSILQALS
MLDPKRNDIWLALEVLTDRATLLAQNTDLGPGDSLLDRLLPQKYLSSNKKVRTVDRAVQT
PTLSYPPGQLELLAEKQAPPPGAGCPPPPPPLPANGVPLLLLPPPPPPLPPLLSPPAPPL
PGFGAPPPPPPPPPPLPGFGAPPPPPPPPPPLPGMGIPPPPPLPGTGPPPPPPLPGMGIP
PPPPMEMIAARSVQTLGSTYSSPAHHSSPAPCPTLRMKKLNWQKLPSRVVTDHQSLWTSS
SSESVEPDYCSIEQLFSLPPTETKTRTKTRTESKEISFIDPKKSLNLNIFLKQFRCSHEE
FVSLIQNGDRSKFDVEILKQLIKLLPEKHEIENLKSNQEDRDKMASVDQFYLQLLNVPSY
ALRIECMLLCEESSCVLETLKPKAELLDRACQSVRESSRLPSFCKLILSVGNFLNYGTHT
GNADGFKIGTLLRLTETKANKSRITLLHHILEEVEEDHPDLLNLPDDLHICEKASGVNME
SIQSEYSSLSKRLKSSEKKVSSSSEDIKEQYLSTIQESLQVCEHLQKVMTSVEDRRRDLA
DYLCEDVGTFSLDDLFGTIKTFRGLFLKAFKENENWRELEKKRKEREEEKKVKGDSGRMV
RREVNQQDEGCIIDNLMAEIRKGHALKKTRTPSRRGQRRGSLPVSADTVHAHPGTIRRSK
AVEDPDSTLSSQSQKTSGMTPIQEVPPSHPGSSGQSKKPLEAVQTPAISSTSNQSATASP
SGTSPDPGSAEPPKNQNPQTPAEETRRRRQESLEDSGLETQGSSGLKGVQPGAERPAPSR
DRSSLSVADGSDFEYITSSEVRGIGPESGEGPSRTHQIRPKGIPGSAAYLNQSGPDQTCQ
NQTVLFIHKPTNQIVPSCCRTP
NT seq
3489 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccagaaccaaatgggacgcagtgaaggagcaagtaaccaaaggttctgacgac
gacccggacggatcactggaggccaacctggagaacgccgacccggagctgtgcgtccgc
ctgcttcaggttcccaccgtggtgaactactcaggtctgcggcggcgcctggagaagagc
gacaagtcgtggatggtccagttcctggagctgcagggtttggacctgctgatgggggcg
ctggagcggctgtcgggccgcggctgcgcccgcatccccgacgcgctgctgcagctcacc
tgcgtgtcgtgcatccgcagcgtcatgaactcgtccgccggactcaacttcatcctggac
aacgaggagggatacatccggaccctggcccaggcgctggacacgtccaacgtgatggtg
aagatgcaggtgtttgagctgctggcggcgctcgccctcttcgacccccagggccgccac
ctgaccctggacgccttcgagaactacaaggttctgaagaagcagcagtatcgcttcagc
gtcatcatgaacgaactgcaggccactgactgcgtcccctacatggtcaccatgatggcc
gccatcaacgtcctcatcctgggacaggaagacctgcgcaagagacaccgactgagacac
gagttcattgggctgcagctgctggatctgctccccaagttgagagagacggaggacatg
gacctcaacgtccagtgcgatgcgttcgtagactctatggcggacgacgaagaagagatg
gagagactgtacggcgggatcgacatgagcaaccaccaggaagtcttcagttcgctcttc
accaaggtgtccagctgtccgtcctcagtccagctgctttccatccttcaggccttgtcg
atgctggacccaaagagaaacgacatctggctggctctggaggtgctgaccgatcgagcc
acgttgctggcccagaacactgatttaggccccggtgattcgctgctggataggctcctc
ccccaaaaatatctgtcatccaataagaaggtcagaacggtggacagggcggtgcagacc
ccaacgctcagttaccctcctggccaattagagctgttggcagagaaacaggctccgccc
cctggagctggctgtcctccacctccaccacctttaccagccaatggagttccacttctt
ctgcttcctcctcctccacctcctcttccacctcttctatctcctcctgctccaccttta
ccaggctttggagctccgcctccaccacctccaccgcctccacctttaccaggctttgga
gctccacctccaccgcctccaccacctccacctttacctggcatggggatcccaccacct
ccaccactaccaggcactggacctccaccacctccacctttacctggcatggggatccca
ccacctccaccaatggaaatgatcgccgctcgttcagtccagactttaggcagcacctat
tctagccctgcccaccactcaagccccgccccctgccccaccctgcggatgaagaagctg
aactggcagaaactcccgtccagagtggtaactgatcatcagtctctctggacgtcgtca
tcgtcagaatcggtggaaccggattactgcagcatcgagcagctcttcagtctgcctcca
actgaaaccaaaaccagaaccaagaccagaacggagtccaaagagatttccttcattgac
cccaagaaaagcctgaacctcaacatcttcctgaagcagttcagatgttcccatgaggag
tttgtgtctctgatccagaacggagaccgatccaagttcgatgtggaaatcctcaaacag
ctgatcaaactgcttccagagaaacacgagatagaaaacctgaagtccaaccaggaagac
agagacaagatggcgtcagtggatcagttttacctgcagctgctgaacgtgcccagctac
gcgctgcggatcgagtgcatgctgctatgtgaagagagcagctgtgtgttggagactctg
aaacccaaagctgaacttctggaccgggcctgccaaagtgtcagggaaagctcccggctg
cccagcttctgcaaactcatcctcagcgtcgggaacttcctcaactacggaactcacact
gggaacgctgacggctttaaaatcggcactttgctccgattgactgaaactaaagccaac
aagtccaggatcacgctgctgcaccacatcctggaggaggtggaggaggaccatcctgac
ctgctcaacctgcctgatgacctgcacatctgtgaaaaggcttctggagtgaacatggag
tccatccagtctgagtactcctctctgtccaaacggctcaaaagctctgagaagaaagtt
tcctcttcctctgaggacataaaggagcagtacctgtccaccatccaggagagcctgcag
gtgtgtgagcatctgcagaaggtcatgacctctgtggaggacaggaggcgggacctggcg
gactacctgtgcgaagacgtcggcaccttttccctcgacgacctttttgggaccatcaag
accttcagagggctgttcctcaaagccttcaaggagaacgaaaactggagagagctggaa
aagaaaaggaaggagagagaggaggagaagaaggtcaaaggagactccggcaggatggta
aggagggaggtgaaccagcaggacgaaggctgcatcattgacaacctgatggccgagatc
cggaagggccacgccctgaagaagaccagaacgccgtcccgcaggggtcagcgccggggg
tcacttcctgtttctgcagacacggtgcacgcgcatcccgggaccatacggaggtcaaag
gccgttgaggacccagactccactctttctagccaatcacagaagacatctggtatgact
ccaatccaggaagttccgccctcccatccaggaagttctggccaatcaaagaagccgttg
gaggcggtccaaactcccgccatttcctccacttccaaccaatctgcgacggcctcaccc
tctggaacgagtcctgatcccgggtcagcagaaccaccaaagaaccagaacccacaaaca
cctgcagaggagaccaggcgcaggcgtcaggagtctttggaggactcgggtctggaaacc
caaggttcctcaggactgaagggagtccagcccggcgcagagcgtccggcaccaagcaga
gaccggagcagcctgagcgtggcggatgggtcggactttgagtacatcacctcgtcagaa
gtgagaggaatcggaccggagagcggcgaaggtcccagcagaacgcaccagatccgacca
aaagggattcctggttctgctgcgtatcttaatcagagtggaccggaccaaacctgccag
aaccaaacggttctgttcatccacaaaccgaccaatcagatcgtcccttcttgttgcagg
actccgtga
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