Xiphophorus maculatus (southern platyfish): 102223198
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Entry
102223198 CDS
T02923
Symbol
ptafr
Name
(RefSeq) platelet-activating factor receptor
KO
K04279
platelet-activating factor receptor
Organism
xma
Xiphophorus maculatus (southern platyfish)
Pathway
xma04020
Calcium signaling pathway
xma04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
102223198 (ptafr)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
102223198 (ptafr)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
xma04030
]
102223198 (ptafr)
G protein-coupled receptors [BR:
xma04030
]
Rhodopsin family
Others
Platelet activating factor
102223198 (ptafr)
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GFIT
Motif
Pfam:
7tm_1
CitMHS
7TM_GPCR_Srx
Serpentine_r_xa
7TM_GPCR_Srd
Motif
Other DBs
NCBI-GeneID:
102223198
NCBI-ProteinID:
XP_023208021
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Position
19:complement(4687894..4699406)
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AA seq
374 aa
AA seq
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MGTETSSTFLDSEFRYMLFPVVYSIIFIVGFFSNLYVLFVLRCLREAKAMGEIRIYMTNL
TIADLLFVCSLPFWIGYYRRKGDWVFQDFMCQLAGSLFFINTYGTILFLGAISLNRYWAV
SRPLDAASSDHRRRGIIVCVVIWAFTILLSIPSFTSPGTNDDGNVTRCFEGYHNQTEDEK
RKVATTHFVIIAMFFLVFFLVVVCNFLIARNLLSQSTPQSVAFSDTIKSNRTLTSTFKRP
NKARGVKRRALQLLLAVVGVFVLCFMPHHVVQGPWVLAVLDIKEGWGHINWSQDTRQALN
DAHQITLVLMGVNCILDPVVYFFATRKFRRFIVEHIKKLSRGEACSHSANIQLSMDSRNH
SQKLPSIQPQPGEE
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
atgggtacagagaccagctcgacctttctggattcggagtttcgctacatgctcttccca
gttgtgtacagcatcatctttattgtgggcttcttctccaatctttatgtgctgttcgtt
ctgcggtgtctccgtgaagcaaaggccatgggagaaatacgcatctacatgaccaacctg
accatcgctgacctcctttttgtttgttcgctacccttctggattgggtactacaggcgt
aagggggattgggtcttccaggatttcatgtgccagctggcaggatcgttatttttcatc
aacacttacggcaccatcctgttcctcggagcgatcagcctcaaccggtactgggcggtc
tctcggcctttggacgcagcctcgtcggaccacaggcgtcgtgggatcatcgtatgtgtc
gtaatctgggcgtttaccattttattgtcaatcccctccttcacttcaccgggtaccaac
gatgatggaaatgtaactcgatgcttcgaggggtaccacaatcaaacggaggacgagaag
aggaaagtggcaactacgcatttcgtaataatcgcgatgttttttcttgtgttttttctt
gttgtcgtgtgcaatttccttattgcccgaaacttactttctcagagtacacctcagtca
gtggctttctctgacacaatcaagtccaacaggacgcttacgtctacgtttaaaaggccc
aataaggccagaggggtgaagaggagggctctccagctgctcctggcggtggtgggggtg
ttcgtgttgtgctttatgccccaccacgtcgtccagggcccctgggtgctggctgtgctg
gatataaaggagggctggggccacataaactggagccaggacacacggcaggcactcaac
gacgcccatcagatcactttggttctgatgggcgtcaactgtatcctggatcctgtggtg
tatttctttgccacaaggaagttcaggagattcattgtggagcacatcaaaaagttatct
agaggggaggcttgctcccactcagcgaacatccaactatccatggacagcaggaaccac
agccagaaacttccgagtatccagccacagccgggcgaggaataa
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