Xiphophorus maculatus (southern platyfish): 102223199
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Entry
102223199 CDS
T02923
Symbol
smc1a
Name
(RefSeq) structural maintenance of chromosomes protein 1A
KO
K06636
structural maintenance of chromosome 1
Organism
xma
Xiphophorus maculatus (southern platyfish)
Pathway
xma04110
Cell cycle
xma04114
Oocyte meiosis
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
102223199 (smc1a)
04114 Oocyte meiosis
102223199 (smc1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
xma03036
]
102223199 (smc1a)
Chromosome and associated proteins [BR:
xma03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
102223199 (smc1a)
Meiosis-specific proteins
Cohesin complex and associated proteins
102223199 (smc1a)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_23
AAA_21
AAA_15
AAA_29
ABC_tran
Motif
Other DBs
NCBI-GeneID:
102223199
NCBI-ProteinID:
XP_005801424
Ensembl:
ENSXMAG00000010960
UniProt:
M4A967
LinkDB
All DBs
Position
1:14976667..14987647
Genome browser
AA seq
1231 aa
AA seq
DB search
MGYLKLIEIENFKSYKGRQIIGPFHKFTAIIGPNGSGKSNLMDAISFVLAEKTSNLRVKT
LKDLIHGAPVGKPAANRAFVSMVYQEDNGEERSFTRVIIGASSEYRINNKVVGLPEYSEE
LEKLGILIKARNFLVFQGAVESIAMKNPKERTALFEEISRSGELAQEYDRRKKEMVKAEE
DTQFNYHRKKNIAAERKEAKQEKEEAERYQRLKDEVARASVQLQLFKLYHNEVEIEKLNK
ELGQRNKEIDKDRKKMDHVEEELKDKKKELGRLMREQQTIEKEIKEKDSELNQKRPQYIK
AKENTAHKIKKLEAAKKSHQNAQKMYKKRKADMDELDKEMRAVELAKQEFEERMEEEAQS
QGQDLTLEENQVKQYHRLKEEASKRAATLAQELEKFNRDQKADQDRLDLEERKKVETEAK
IKQKIREIEENQKRIEKLEDYIATSRQSLDEQKRMEEELTEEVEMAKRRIDEINMELNQV
MEQLGDARIDRQENSRQQRKAEIMESIKRLYPGSVYGRLIDLCQPTQKKYQIAVTKVLGK
NMDAIIVDSEKTGRDCIQYIKEQRGEPETFLPLDYLEVKPTDEKLRELRGAKLVIDVIRY
EPPHIKKALQYACGNALVCENVEDARRIAFGGPYRHKTVALDGTLFQKSGVISGGASDLK
AKARRWDEKAVDKLKEKKEKLTEELKEQMKAKRKEAELRQVQSQAHGLQMRLKYSQSDLE
QTKTRHLSLNMQEKSKLESELANFGPRINDIKRIIQSREREITDLRDRMNLVEDEVFVEF
CKEIGVRNIREFEEEKVKRQNEIAKKRLEFETQKTRLGIQVDYEKNQLKEDQEKVMMWEQ
TVKKDEAEIERLKKEEHRHMKIIDETMAQLQDLKNQHLTKKSEVNDKNHEMEEIRKKLGG
ANKELTQLQKEVTAIETKLEQKRSDRHNLLQACKMQDIRLPLRSGTMDDISQGEGSSQTD
DSSSQRTSSSVLAKEALIEIDYSNLSEDLKDALSEEEIKAETNTLQQRLNEQQSILQRIS
APNMKAMEKLESVRDKFQETSDEFEAARKRAKKAKQAFEQIKKERFDRFNTCFDSVATNI
DEIYKALSRNSSAQAFLGPENPEEPYLDGINYNCVAPGKRFRPMDNLSGGEKTVAALALL
FAIHSYKPAPFFVLDEIDAALDNTNIGKVANYIKDQSVQNFQAIVISLKEEFYTKADSLI
GVYPEQGDCVISKVLTFDLSQYPDANPNPNE
NT seq
3696 nt
NT seq
+upstream
nt +downstream
nt
atgggctacttaaaactcatagagatagaaaacttcaagtcgtacaagggacgacaaatc
atcggaccctttcacaagtttacggcaattatcggacccaatggatcgggtaaatccaac
ctcatggatgccatcagctttgtgttggcagaaaagacgagtaacctgcgtgtcaagact
ttgaaggatctaatccatggagctcctgtggggaagccagctgccaacagagcatttgtc
agcatggtgtaccaagaggataacggagaggagcgttccttcacacgggtcattattggg
gcctcatccgagtaccgcataaacaataaagtggttgggctacctgaatacagcgaggag
ctggaaaaacttgggattctgatcaaagccagaaactttcttgtctttcagggggcggtg
gagtccattgccatgaagaaccccaaagagcgaacggcgctgtttgaggagatctcacgt
tctggggagttggcacaagagtatgaccgcaggaagaaggagatggtgaaagcagaagaa
gacacacagttcaattatcaccgcaagaaaaacattgctgcggagcgcaaagaagccaag
caggagaaagaggaggctgagcgataccaacgccttaaagacgaggtagccagagccagt
gtacagttacagctcttcaagttgtaccacaatgaggtcgagatcgagaaactgaacaaa
gagctcggccagcggaataaagaaattgataaggaccgtaaaaagatggaccacgttgaa
gaggagctgaaggacaagaagaaagagttggggaggctgatgagggagcagcagaccatc
gagaaagaaatcaaagaaaaagactctgagctgaatcaaaagaggcctcagtatatcaag
gccaaagagaacacggcacacaaaatcaaaaagctcgaagctgcgaaaaaatctcatcag
aacgcccagaagatgtacaagaagcgcaaagctgacatggatgagctggataaggagatg
agagcggtggagttggcgaagcaggagtttgaggaaagaatggaggaggaggctcagagc
cagggccaggacctcacactggaggaaaaccaggtgaagcagtaccatcgcctgaaggag
gaggccagtaagcgtgctgccactctggcccaggaactggagaagttcaaccgggaccag
aaggctgaccaggaccgccttgatttggaggagaggaagaaagtggagacagaggccaaa
atcaagcagaagattcgtgaaatagaggaaaaccagaagcgtattgagaagctagaggac
tacatcgccaccagcagacagtcacttgatgagcagaagcgcatggaggaggagttgaca
gaggaagtagagatggccaagaggaggattgatgaaataaacatggagcttaatcaggtg
atggagcagctgggagatgccaggatcgacagacaggagaacagtcgacagcagcgcaag
gcagaaatcatggagagcatcaagagactttaccccggatctgtgtacggccgcctgatc
gacctgtgccagcccactcagaagaaatatcagattgctgttactaaagtgttgggcaag
aacatggatgccatcatcgtcgactcagagaaaaccggccgagactgcattcagtacatc
aaggagcagagaggagagcctgagaccttccttcctcttgactatcttgaggtcaaacca
acagatgaaaagctgagagagttgcgcggggccaagctggtgatcgatgtgatccgctac
gagccgccacacatcaaaaaagccctccagtacgcttgcggcaacgctttggtttgtgag
aatgtcgaggacgcacgaaggatcgctttcggagggccttacagacacaagactgtagcc
ctggatggcacgttgttccagaagtcaggggtcatctccggaggagccagcgacctgaag
gccaaggccagacgctgggacgagaaggcggtggacaaactgaaggagaagaaggaaaaa
cttacagaggagctaaaggagcaaatgaaggcaaagaggaaggaggcagaactgcgtcag
gtgcagtctcaggcacacggcctgcagatgagactcaaatactcccagagcgacctggag
caaaccaaaaccaggcacctctccctcaacatgcaggagaaatctaaacttgagagtgaa
cttgcaaattttggccctcgcatcaatgacatcaagaggattatccagtcccgtgagcga
gagatcactgacctccgagatcgcatgaacctagtggaggacgaggtgtttgttgaattc
tgtaaggagatcggagtgagaaacatccgagaatttgaggaggagaaagtgaagaggcag
aatgaaatcgcaaagaagcgtcttgagtttgagacccagaagacccgtctgggaatccag
gtggactatgagaagaaccagctgaaggaggaccaggagaaagtcatgatgtgggagcaa
actgttaagaaagatgaggctgagatagagcgccttaagaaggaggagcacagacacatg
aaaatcattgatgagacgatggcccagctgcaggacctgaagaaccaacatctcaccaag
aaatctgaagtcaacgataaaaaccacgaaatggaggagattcgcaaaaaactgggaggc
gctaacaaagagctgacccagctccagaaggaggtcactgctatcgagaccaaactggag
cagaagcgcagtgaccgccacaacctgctgcaggcctgcaaaatgcaggacatcaggctg
ccgcttcgctctggaaccatggacgatatcagccagggagaagggagctcccagacagat
gactccagcagtcagaggacgtccagcagcgttctggctaaagaagctctaatagaaatc
gactacagcaacttgtctgaagatctgaaggatgcattgtcagaagaggagataaaagcg
gagacaaacacactgcagcagcgtctgaacgagcagcagagcatcctgcagaggatcagc
gctcccaacatgaaggccatggaaaaactggagagcgtcagggacaagttccaggagacc
agtgatgagtttgaggccgctcgtaagagagccaaaaaggcaaagcaagccttcgagcag
atcaagaaagagaggtttgatcgttttaatacctgcttcgactctgtggccaccaacatc
gatgagatctacaaagctctgtcacgcaacagcagcgcccaggcttttctgggtccagaa
aacccagaggaaccgtatctggatggtatcaattataactgtgtggcgccagggaaaagg
ttcagacccatggataacctgtctggaggagagaagacggttgctgccctggctctgctt
tttgctatccacagctacaaaccggcgccgttcttcgtcctggatgagatcgatgccgct
ctggacaacactaatattggcaaagtggccaattacatcaaagaccagtcagtacaaaac
ttccaagctattgtcatttctctgaaggaggagttctacaccaaggctgactctcttata
ggcgtttatccagagcaaggagattgtgttatcagcaaagttctcacctttgacctgtcg
cagtatcctgatgccaacccgaatccaaatgagtaa
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integrated database retrieval system
