Xiphophorus maculatus (southern platyfish): 102223221
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Entry
102223221 CDS
T02923
Symbol
sec24a
Name
(RefSeq) protein transport protein Sec24A isoform X1
KO
K14007
protein transport protein SEC24
Organism
xma
Xiphophorus maculatus (southern platyfish)
Pathway
xma04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
102223221 (sec24a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xma04131
]
102223221 (sec24a)
Membrane trafficking [BR:
xma04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
102223221 (sec24a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec23_trunk
Sec23_BS
Sec23_helical
zf-Sec23_Sec24
Gelsolin
Sen15
Motif
Other DBs
NCBI-GeneID:
102223221
NCBI-ProteinID:
XP_005807257
Ensembl:
ENSXMAG00000008298
LinkDB
All DBs
Position
11:7873071..7895887
Genome browser
AA seq
1106 aa
AA seq
DB search
MSTAGFNSQNGTGTGQTYTNGPSQNPVALQQPPGVGYGMNHQPAYNPMQTKVLGPPSPAL
YASGPYQPVPPGPQLGSYPPPPAQPLLTRPPIGVLPSHTPPQSASPGPGPRQAQATPPAQ
ATPPPPAVTSTSYYTGPPAWQYAAPRGPAPNHVNPAAAAPPHMSHGSAQPPGPGAPPTSI
HGYPQPGTAPPPMNPPPPHTYQPNRPAYGPPPTAPPAGPPGATGTPPPPKVDAQSWGAAS
SARPPTEPDTQEGDVECPGDVAGNGPQAPNSYNHVDNRMAGAAQPGPPGRHLGHYPSLPP
GYQNTLAPPPSSLHPALQAATQPYIQGPQPYQQQPGGPGPDQLSPSMAAMSLQSGTPEAL
RVVNLLQERNLLPPAPVPAPTPCLTQDLQKLNCSPEVFRCTLTSIPQTQSLLNKAKLPLG
LLLHPFKDLSQLPVVTSSTIVRCRSCRTYINPFVSFLDQRRWKCNLCYRVNDVPEEFMYN
PVSRSYGEPHKRPEVQNATIEFIAPSEYMLRPPQPAVYLFVLDVSHNAVETGYLSVFCQS
LLDNINALPGDSRTKVGFITFDSTIHFYNLQEGLSQPQMLIVSDIEDIFLPTPDSLLVNL
NECKELVQDLLKSLPNLFEKTMETQSALGSALQAAFKLLSPTGGRMSVFQTQLPNLGVGA
LQSREDPNQRASAKDVQHLSPATDFYKKLALDCSGQQVAVDLFLLSAQYCDLASLGCISR
FSAGSVYYYPSYHHQHNPAQVERFQRDLKRYLTRKIGFEAVMRIRCTKGLSIHTFHGNFF
VRSTDLLSLPNVNPDAGFAVQMSIEENLDDMQVVSFQAALLYTSSKGERRIRVHTMCLPV
VSSLSDVFAGADVQAVTGLLACMAVDRSVTSSLSDARDAMTNAAIDSLSSYRQSALTIQQ
PGLLAPACLRLFPLYILALLKQKAFRTGTSTRLDERVFAMYQLKYQPLAFAMLMIHPALY
RLDDLSDEGALNINERTIPQPRVLQLSVEKLSREGAFLMDAGLVMYLWIGRNCHQNFLSQ
VLGVSSYAAVPEKLCLLPELDTAESQRTRALVSWLRDQRPFFPSLHIIRDESQLKPHFMQ
NMIEDRTESALSYYEFLLHLQQQISK
NT seq
3321 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaccgccgggttcaactcccagaacgggactgggacgggacagacgtacacgaac
ggtccgtcacagaatcccgttgctctgcagcagccgccgggggtcggctacggcatgaat
caccagccggcctacaacccgatgcagaccaaagtgttgggccctcccagccccgctctg
tacgcttctgggccgtaccagccggttccgcccggcccacagttaggctcctaccctccg
ccgccggcccagcctctgctgacccggccgccgatcggcgttctcccgtcccacaccccc
cctcagtccgccagtccgggcccagggccccgacaggcccaggccacgcccccagctcag
gccacgccccctcctcctgctgtcacctccaccagctactacaccggccctccagcgtgg
cagtacgctgctccccggggccccgcgcccaatcatgtgaatccagctgctgctgcgccg
ccccacatgtcccacggctccgcccagccgccgggcccaggagccccgcccacctccata
cacggataccctcagccaggcaccgctcctccaccgatgaaccctccgcctccccacaca
taccagcccaacaggcccgcctacggtcctccacccacagcgccccctgctggaccccca
ggagccactggcacacctccacctcccaaagttgatgctcagtcctggggggctgccagc
agcgcccggccccccactgagcccgacacccaggaaggagatgttgaatgtccaggagat
gttgcaggaaacggcccacaggcaccaaacagctacaatcacgttgacaacagaatggct
ggtgcagctcagccgggcccgcctggtcggcatttgggccactacccgtccctgcccccc
gggtaccagaacaccttggcgccgcctccctcctcccttcacccggcgctccaagccgcc
acgcagccgtacattcagggacctcagccgtaccaacagcagcctggcggtcccggtccg
gaccagctgagcccgtcgatggcggccatgagcctgcagtccggcacgccggaggctctg
agagtggtcaacctgctgcaggagaggaacctgctgccgccagcgccggtccccgccccg
acgccctgcctcacccaggacctgcagaagctcaactgcagcccagaggttttccgttgc
acgctgaccagcatccctcagacccagtctctgctgaataaagccaaactgccgctgggc
ctgctgctgcaccccttcaaagacctctcgcagcttcctgtggtgacgtccagcaccata
gtgcggtgtcggtcctgcagaacctacatcaacccgtttgtttcctttctggaccagagg
agatggaaatgcaacttgtgctatcgagtaaatgatgtcccagaagagtttatgtataac
ccggtcagcagatcatacggcgaaccgcacaaaagaccagaagtccagaatgccactatt
gagttcatcgctccttcagaatacatgctgcggccgccgcagccggccgtctacctgttc
gtcctggacgtgtcccacaacgccgtggagacgggttacctgagcgtcttctgccagtcg
ctgctggacaacatcaacgcgcttcccggagactcgcggaccaaagtgggcttcatcacc
ttcgacagcaccatccacttctacaacctgcaggaggggctttcccagccacagatgctc
atcgtctccgacatcgaagatatctttctaccaacaccagacagccttctagtaaacctt
aacgaatgcaaggagcttgtgcaggatctgctgaagagtctgccaaacttattcgagaag
acgatggagacgcagtctgctctgggctcggctctgcaggccgccttcaagctgctgtct
cccaccggagggcggatgtccgtctttcagacgcagctgcccaacctgggcgtgggggcg
ctgcagtccagagaggaccccaaccagagagcgtctgccaaggatgtccagcacttatcc
ccagcaacagatttctacaagaagctggccctggactgctccggccagcaggtggcagtg
gacctgtttctgctcagcgctcagtactgcgacctggcgtcgcttggttgcatatccaga
ttctcggcagggagcgtttattactacccctcctatcaccatcagcacaacccggctcag
gtggagcgcttccagagggatctgaagagatacttaacgcgaaaaatcggctttgaggcc
gtcatgagaatacgatgcaccaaaggattgtccatccacacgttccacggaaacttcttt
gtgcgttccacggacctgctgtccctccccaacgtcaacccggacgccggcttcgccgtc
cagatgtccatcgaggaaaacctggacgacatgcaggtcgtctccttccaggctgctctg
ctttacacctccagcaaaggagagaggaggattcgggttcacaccatgtgcctcccggtg
gtcagttctctgtcggatgtgtttgctggagccgacgttcaggccgtcactgggctgctg
gcctgcatggctgtggatcgctctgtgacatccagcctgagcgacgccagagacgccatg
accaacgccgccatcgactcgctgtcgtcgtaccggcagtctgcgctgaccatccagcag
cccggcctgctggcgccggcctgcctgcgcctcttcccgctctacatcctggctctgctc
aaacagaaagccttcagaaccggaaccagcacccggctggatgagcgagtgttcgccatg
taccagctgaagtaccagccgctggcgttcgccatgctgatgatccacccggctctgtac
cgcctggacgacctgagcgacgagggagcgctgaacatcaacgagcggaccatcccccag
cccagagttctgcagctgtcggtggagaagctcagcagggagggagcgttcctcatggac
gctgggctggtgatgtatctttggatcggacgaaactgccaccaaaacttcctctctcaa
gtcctgggagtttccagctacgctgccgttccagagaagctgtgtctccttccagagctg
gacactgcagagtcccagagaaccagagcgttggtcagctggctcagggaccagcggccg
ttcttcccctccctccacatcatcagggacgagagccagctgaagcctcacttcatgcag
aacatgatcgaagaccggacggagtcagctctgtcctactacgagttcctgctccacctg
cagcagcagatctccaaataa
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integrated database retrieval system
