KEGG   Xiphophorus maculatus (southern platyfish): 102223275
Entry
102223275         CDS       T02923                                 
Symbol
wdr82
Name
(RefSeq) WD repeat-containing protein 82
  KO
K14962  COMPASS component SWD2
Organism
xma  Xiphophorus maculatus (southern platyfish)
Pathway
xma03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:xma00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    102223275 (wdr82)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:xma03019]
    102223275 (wdr82)
   03036 Chromosome and associated proteins [BR:xma03036]
    102223275 (wdr82)
Messenger RNA biogenesis [BR:xma03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     102223275 (wdr82)
Chromosome and associated proteins [BR:xma03036]
 Eukaryotic type
  Histone modification proteins
   HMT complexes
    COMPASS/SET1 complex
     102223275 (wdr82)
    COMPASS/SET1 complex (yeast)
     102223275 (wdr82)
SSDB
Motif
Pfam: WD40_Prp19 WD40 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_EML_2 Beta-prop_TEP1_2nd ANAPC4_WD40 Beta-prop_CAF1B_HIR1 WDR55 Beta-prop_WDR90_POC16_2nd EIF3I Beta-prop_TEP1_C WD40_MABP1-WDR62_2nd Beta-prop_EML Beta-prop_WDR19_1st WDR90_beta-prop_4th Beta-prop_IFT122_1st WD40_MABP1-WDR62_1st Beta-prop_WDR75_1st Beta-prop_SPT8 Beta-prop_RIG_2nd NBCH_WD40 WD40_RFWD3 Beta-prop_IFT140_1st WD_LRWD1 Beta-prop_HPS5 Beta-prop_DCAF4 MinC_C VPS8_N
Other DBs
NCBI-GeneID: 102223275
NCBI-ProteinID: XP_005796990
Ensembl: ENSXMAG00000016956
UniProt: M4ARA4
LinkDB
Position
20:15354589..15359757
AA seq 313 aa
MKLTDNVLRSFRVAKVFRENSDKINCFDFCSNGEAIISSSDDDSLVLYDCQEGKPKRTLY
SKKYGVDLIRYTHAANTVVYSSNKIDDTIRYLSLHDNKYIRYFPGHNKRVTSLSMSPVDD
TFISGSLDKTIRLWDLRSPNCQGLMHLQGKPVCSFDPEGLIFAAGINSEMVKLYDLRSFD
KGPFATFKLQYDRTCEWTGLKFSNDGKLILLSTNGGALRILDAFKGAVLHSFGGYNNSKG
VTLEASFTPDSQFVMIGSEDGKIHVWNAESGMKVALLDGKHTGPITCLQFNPKFMTFASA
CSNMAFWLPTIDD
NT seq 942 nt   +upstreamnt  +downstreamnt
atgaagctaacggacaatgtgctccggagctttcgggttgctaaagtgttccgagaaaac
tcggacaaaattaactgcttcgacttttgctccaacggagaggcaatcatttccagcagc
gacgacgactccttagtgttgtacgactgccaggagggaaaacccaaaagaactctctac
agtaaaaagtatggcgtggatctgatcaggtatactcatgctgcaaacacagtggtctac
agttccaacaaaatcgatgacactatccggtatttgtctcttcatgacaacaaatatatc
cggtattttcctggacacaacaaaagagtgacgtctctgtccatgtctcctgtggatgac
acgtttatttccggctcattagacaagacgatcagattgtgggatctgcgctcaccgaac
tgccagggtttgatgcacctgcaggggaagcctgtttgctcatttgatccagagggtctc
atttttgcagctggcataaattcagagatggttaaactttatgatctgcgctcatttgat
aagggtccgtttgcaactttcaagcttcagtacgatcggacatgtgagtggactggactc
aagtttagcaatgatggaaaactcatccttctttcaaccaacggcggggcgcttcgcatt
ttggacgcttttaaaggggcggtgctgcattctttcgggggctacaacaacagtaaaggc
gtaaccttagaggcttctttcactcctgattctcagtttgtgatgattggctctgaagat
ggaaagatccatgtgtggaatgctgaaagcgggatgaaggtggcgttattagacgggaag
cacacaggccccattacctgcctgcagttcaatccaaagttcatgacctttgccagtgcc
tgctccaacatggctttctggttgccgaccattgatgactga

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