Xiphophorus maculatus (southern platyfish): 102223290
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Entry
102223290 CDS
T02923
Symbol
gigyf1
Name
(RefSeq) GRB10-interacting GYF protein 1
KO
K18730
PERQ amino acid-rich with GYF domain-containing protein
Organism
xma
Xiphophorus maculatus (southern platyfish)
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xma03019
]
102223290 (gigyf1)
Messenger RNA biogenesis [BR:
xma03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
102223290 (gigyf1)
Surveillance factors
Other surveillance factors
102223290 (gigyf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GYF
GYF_2
DUF6033
DUF1266
Motif
Other DBs
NCBI-GeneID:
102223290
NCBI-ProteinID:
XP_023201735
LinkDB
All DBs
Position
14:complement(19876575..19902827)
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AA seq
1065 aa
AA seq
DB search
MTAETLNFGPEWLRALSSGGSVTSPPPSPAMPKYKLAEYRYGREEMLALYIKDNKVPEDM
QDKEFAAILQDEPMQPLALVPLTEEEQRNFSMSVNSAAVLRLMGKGVGGPAPAGVVRGRG
AARGGRGRGRGEGGFYQRSIEDTEVGFGRNVREIHRSQSWDDRGERRFEKPLRREVGRPS
FEESSGPVGPVRKEYTRADSDNWRTLREEQEEDEGEPGTNWRLSGSRRDDGGPRSAGWRD
HSGPGEGRRRKFDFDFRDSEGHGAGRRRAGSEGLEDDRDGLPEWCTDEEDGEMGTFDSSG
AFMPLKKGGKETILEEDLDFKGIEDEDEDDGFLDAERNNGDGDKDKEIKDLLPAAGEEKM
KPAPPSSSSSSPPAHCAPPSLELQPGSAGQLMENSQMNNSHSVKAGSASADDLASVGGSK
SQLSPSVAIGNASTSSNLPPPPSSSAAPLLPPSGGDPEDDEGLKHLQQEAEKMVASLQDT
SMEEECFTHSLQQQESRNTAAALPLSHEAAMKWFYKDPQGEIQGPFTTVEMCEWFQAGYF
TMTLLVKRGCDEGFQPLGDVIKMWGRVPFAPGPSPPPLLVRQLPPTQRSQTSRGSSGTGN
LDQERLKKQQELATAALYQQLQQQQLFQLINRCSEQGMMPSMNRSMSVPDTGPLWDMHTS
ASQSSGGEASLWDLTMNPNTQGPTLEQLQKLQERRDAELRAKREEEEQRKRREEKRRQQQ
EEQKRREEEELYRRKQRQQQELLMKLLQQQSPQQQGSAMGGSGWSSAPSSGLSKAGKSLT
MLEMQEAERILKQQQQRVQQQRHPGLSMGSSSMGGQWADGVGMWGGLEGKGGSGSSSSSM
GMWDEAVKNQAGLRGNTNNNLGLKNSRSSPSLTDQYMMRRKRTEDEEKLLKLLQGMKPQD
GFTTWCEQMLHALNTSANNSSSSLDVATIVAYLKEVESPYAVLDFIRSYLGDTVEAKEFA
KQFLERRAKQKANQQRQQQQLSKEVGGLNMNFPLQDSMRGMNPSTLQSMFQANHMGKAGL
YDNQGGKMKKKPPMMLHSDPSILGYSFHNTGECLSMNEMEMVEDY
NT seq
3198 nt
NT seq
+upstream
nt +downstream
nt
atgactgctgagactctaaacttcggcccagaatggcttcgtgcactgtccagtgggggg
agtgtgacgtctccccctccttcccccgccatgccaaagtacaagctggccgagtatcgc
tacggccgagaggagatgttagcactttatatcaaagacaacaaggtcccagaggacatg
caggataaggagtttgctgctattttgcaagatgagcccatgcagcctctggcactggtg
cctctcaccgaggaggagcagaggaacttctccatgtccgtgaacagcgcggcagtgctg
aggctcatgggaaagggagttggagggccagcacccgccggagtcgtccgtggacgaggg
gccgctcgaggtgggcgaggccgaggccgcggcgaagggggattctaccaaagaagtatt
gaggacaccgaggtgggatttggtcgcaacgtccgagagattcaccgcagccagagctgg
gacgaccggggcgagcgacggtttgagaagccgctgcggcgggaggtggggcggcccagt
ttcgaagaaagcagcggtcccgtgggtcccgtgaggaaggagtacacaagggctgacagc
gacaactggcgcacgctccgtgaggagcaggaagaggacgagggcgagccgggaaccaac
tggaggctgtctggatcccgcagggacgatggtggtcctcgctcagcgggctggcgggac
cacagcggtccaggtgaaggtcggcgaagaaagtttgatttcgacttccgggactcggag
ggtcacggcgctggccgccgtcgcgcaggaagcgagggattggaggacgaccgggacggc
ctgccggagtggtgcacggatgaggaggacggagagatggggacgttcgactcctccgga
gcgttcatgcccttaaagaagggtggtaaggagacaatcctggaggaagatttggacttt
aagggcatcgaggacgaggatgaggacgacggcttccttgatgcagagaggaacaatgga
gacggagataaagacaaggagattaaagacctccttcctgctgcaggggaagaaaagatg
aagccagcaccaccctcctcttcctcctcctcccccccagcccactgtgccccgccatca
ctggagctccaaccaggaagtgctggtcagttgatggagaactctcagatgaacaacagc
cactctgtcaaggccggcagcgcctctgctgatgacctggcctcggtggggggctccaag
tcccagctcagccccagcgtcgccatcggcaatgcctccacctcctccaacctacctccc
ccaccctcctcctctgctgctccgctcctccctccttctggaggagaccccgaggacgat
gaaggcctgaaacacttgcaacaggaggcagagaagatggtggcgtcgctgcaggacacg
tccatggaggaggaatgcttcacgcattctctgcagcagcaggagagccggaacacagcg
gctgctctgccgctgtctcacgaagccgccatgaagtggttctacaaagacccgcaggga
gagatccaggggccgttcaccacggtggagatgtgcgagtggttccaggccggctacttc
accatgacgctgctggtgaagcggggctgcgacgagggcttccagcccctgggggacgtc
atcaagatgtggggccgcgtgccctttgcccccgggccctcgccgccgccgctgctggtg
aggcagctcccgccaacgcagcgctcgcagaccagccgggggtcctctgggacggggaac
ctggaccaggagcggctaaagaagcaacaggagctggcgacggcagctctctatcagcag
ctccagcagcagcagctattccagctcattaacaggtgcagtgagcagggtatgatgcct
tcgatgaaccggtcgatgtcagtgccagatacagggcccttgtgggacatgcatacctca
gcttcacagtcgtcaggcggtgaagccagtctttgggacttaacaatgaatcctaatact
cagggtccaactcttgaacagcttcagaagctccaggagaggcgagacgccgaactcagg
gcgaagcgcgaggaggaggagcagcgcaagaggagggaggagaagaggaggcagcagcag
gaggagcagaaacggagggaggaggaggagctctacagacgcaagcagcgtcagcagcag
gaactgctcatgaagctgctgcagcagcagtcgccccagcagcagggatctgcaatgggg
ggctcagggtggagcagtgcgccctcttctggcctctctaaggcagggaagtctctgacc
atgctggagatgcaggaggctgagcgcatcttaaagcagcagcagcagcgagtgcagcag
cagagacatccagggctgtccatggggagttcctccatgggtgggcagtgggccgacggc
gtgggcatgtggggcggtctggagggaaagggaggaagcggcagctcctccagcagcatg
gggatgtgggatgaggcggtgaagaaccaggccggcctgcgggggaacaccaacaacaac
ctgggcctgaagaacagccgcagcagcccctctctgaccgaccagtacatgatgcgtcgt
aagagaacggaggacgaggagaagctgctgaagctgctgcagggcatgaagcctcaggac
ggcttcaccacctggtgtgaacagatgctgcacgctctcaacacctctgccaacaactcc
tcttcctctctggatgtcgccaccatcgtggcgtacctgaaggaggtggagtctccctat
gcagtgctggatttcatccggtcctaccttggggacacagtggaagccaaagagttcgcc
aaacagtttctggagcgacgtgccaaacagaaagccaaccaacagagacagcagcaacag
ctatcaaaagaagtgggtgggttgaacatgaacttccctctgcaggactcaatgcgagga
atgaatccaagcactctgcagtccatgtttcaggccaaccacatgggcaaagctggtctc
tatgacaaccagggaggaaagatgaagaagaagccacccatgatgctgcactctgatccc
agcatcttagggtactcattccacaacacaggcgaatgtctgagcatgaatgagatggag
atggtggaggattactga
DBGET
integrated database retrieval system
