Xiphophorus maculatus (southern platyfish): 102223393
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Entry
102223393 CDS
T02923
Name
(RefSeq) netrin-1-like isoform X1
KO
K06843
netrin 1
Organism
xma
Xiphophorus maculatus (southern platyfish)
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
xma00536
]
102223393
Glycosaminoglycan binding proteins [BR:
xma00536
]
Heparan sulfate / Heparin
Axon guidance molecules
102223393
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Laminin_N
NTR
EGF_laminin
EGF_LMN_ATRN
Motif
Other DBs
NCBI-GeneID:
102223393
NCBI-ProteinID:
XP_023202408
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Position
14:12423426..12443429
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AA seq
844 aa
AA seq
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MSSSLGSAESTLDDMMVRPSSLPPSISLIPVLLRLLLLPPSLISSSFSNAPLSWTSPHEP
CYHPDGRPRHCLSEFINAAYGVQVNVTHSRHGPDNNPNITTLTDLHNPNNLTCWRARAGG
DSGDWVFTLPLGRRFEITYISLQFCSQGQPSDPISISILKSMDHGRTWRPMQHYSSNCLE
DFKQPSLTIAQTRHQETEPLCSDPRPLQRQRGSTVLAFSTLDGRPSSPDFDYSPTLQDWV
TATDIRVVFHRTSNNVKATDKMEEIQWRDGLPDSKRTGILKWKLDTKSDTGDQVDKLRDN
ALAFFDKDKRKNSEISRRNKEERIDKQRQKDHRKGSGHGQDGHNVTSKEGEDTFGTTDLL
ASPKKGGKARKRNRNKENNFWVPCSNGDCTWTVEGRSRKNGGRELRKRRNNNPNTKQNLR
TSQPSGLILPVRAPLAISDLQVGGRCKCNGHASRCRRDDAGQAVCVCEHHTAGPDCDICE
DFYVDRPWHRATPTHPNPCVACECNGHSHKCRFSMEVFQQSGRKSGGVCLKCRHHTAGRH
CQYCQNGYTRDSSKPLDHRKACQPCQCHPLGAVGRWCNQTSGQCLCREGVTGLRCNRCAP
GYKQGKSPLRPCIRIQEVAPTPVYQPQYSIAEECVSYCQPSEVKVRMNLETYCLKDYVLK
VQVRGMERSGPWWQFSIAVQTVFRTGSNSRVRRGSQSLWVPDRDLSCGCPALHVGRTFLL
IGAEEGERSWAPEESRLVADRSTLALQWREHWSPKLRGFRGQDKRGRCPQKSPSAHRPRS
REHAKTHSAYIPPHLLTEKDASPHFDKTVNLDEAQSSTERHIAPTETGPSSSTIALVCST
QNPE
NT seq
2535 nt
NT seq
+upstream
nt +downstream
nt
atgagttcttcactgggatctgcagaaagcacgctcgatgacatgatggtccgaccctct
tcccttcccccctccatctctctcattcctgttctcctccgactcctcctcctccctccg
tctctcatctcctcttccttctccaacgccccactgagctggacctcgcctcacgagccc
tgctaccacccagatggccgtccgcgacactgcctgtcggagtttatcaatgccgcttac
ggggtccaagtcaacgtcacccactcccgacacgggcccgataacaaccccaacatcacc
accctaacggacctgcacaacccaaacaacctgacctgctggagggctcgcgcaggaggc
gactccggcgactgggtcttcaccttaccgctgggccgccgctttgagatcacctatatc
agcttgcagttctgcagccaagggcagccgtctgaccccatatccatctccatccttaaa
tccatggaccacgggcgtacctggcggccgatgcagcactactccagcaactgtctggag
gacttcaaacaaccctcattgaccatcgcccaaacgagacaccaagagacagagccgctc
tgttcggacccccggcccctgcagaggcagcggggcagcacagtccttgccttctccact
ctggatggtcgcccgtcttctcctgattttgattacagccccaccctccaggactgggtc
acggccacggacatccgggttgtcttccacagaacttccaacaacgtaaaggctacagat
aaaatggaagaaatccagtggcgtgacggcctccctgactccaaacgaactgggattctg
aagtggaaattggatacaaagagcgacactggagatcaggtggacaaattaagagacaat
gcactggctttttttgacaaggacaaaagaaaaaactcagagattagtaggaggaataag
gaggaacggatagacaagcagcgtcagaaggaccatcgcaaaggttctggtcatggccaa
gatggacacaatgtgaccagcaaggaaggagaagacacttttggcaccaccgacttactc
gcttcgccaaaaaaaggtggcaaagccagaaagcgaaatcgcaacaaggaaaacaacttt
tgggtcccttgctcaaacggagactgcacttggacggtcgaagggcggagcaggaagaat
ggtggccgggaactgaggaagaggaggaacaacaaccccaacacaaaacaaaacttacgg
acttcccagccctctggcttgatcctccctgtccgagctcctctggccatttccgacctg
caagtcggagggaggtgcaaatgcaacggacacgcttccaggtgtcgccgtgacgacgca
ggtcaggcagtgtgtgtgtgcgagcatcacacggcgggcccagactgtgacatatgtgag
gacttctatgttgatagaccgtggcatcgcgctacacccactcacccaaacccctgcgtt
gcctgtgagtgtaatggccactcacacaaatgccgcttcagcatggaggtgttccagcag
tcgggcaggaagagcggaggcgtgtgcctgaagtgtcgccaccacacggccgggcgccac
tgccagtactgccagaacggctacacccgcgactccagcaagccgctcgaccaccgcaag
gcctgccaaccatgccagtgccatcctctgggagctgtgggccgctggtgcaaccaaacg
tcgggtcagtgtctgtgtcgagaaggagtgaccggcctcaggtgtaaccgctgcgctccg
ggatacaagcagggcaagtccccgctgcgaccctgcatacgcattcaggaggtcgctcca
acccctgtgtaccaacctcagtacagcatcgcggaggagtgtgtgtcctactgccagccc
tctgaggtcaaagtcaggatgaacctggagacgtattgtctcaaggactatgtgctgaag
gtgcaggtgagagggatggagcgttcaggaccgtggtggcagttctccatcgctgtacaa
accgtcttccggacaggctctaactcccgtgtccggaggggctcccagtccctctgggtt
cccgaccgcgacctcagctgcggctgccccgccctccacgtgggccggacattcctcctc
atcggcgcagaggaaggggagcggagttgggctccggaagagagtcgcctggtggcggat
cgctccacactggccctccagtggcgggaacactggagccccaagctcaggggcttccgg
gggcaggacaagaggggccgctgcccccagaaatccccaagcgcccaccgcccccgtagc
agggagcacgcaaagacacattctgcatacatcccccctcacctgctgactgagaaggat
gccagccctcattttgacaaaactgtgaacttggatgaggctcagagcagcacagagcga
cacatcgcccccacagagacaggaccctcttcttccaccatcgctctggtgtgttcgaca
caaaatcctgagtaa
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