Xiphophorus maculatus (southern platyfish): 102223457
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Entry
102223457 CDS
T02923
Name
(RefSeq) protein polybromo-1 isoform X1
KO
K11757
protein polybromo-1
Organism
xma
Xiphophorus maculatus (southern platyfish)
Pathway
xma03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
102223457
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
xma03021
]
102223457
03036 Chromosome and associated proteins [BR:
xma03036
]
102223457
Transcription machinery [BR:
xma03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
102223457
Chromosome and associated proteins [BR:
xma03036
]
Eukaryotic type
Chromatin remodeling factors
PBAF complex
102223457
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bromodomain
BAH
HMG_box
HMG_box_2
HMG_WDHD1
DUF5517
FTCD_N
Motif
Other DBs
NCBI-GeneID:
102223457
NCBI-ProteinID:
XP_023181416
Ensembl:
ENSXMAG00000001271
LinkDB
All DBs
Position
20:19080847..19096904
Genome browser
AA seq
1553 aa
AA seq
DB search
MALKRRRATSPSSSVSGGDFDDSQTSLVSSIGRKRRRTSNIPTVDPIAVCHELYNTIRDY
KDDHGRMLCELFIRAPKRRNQPDYYHVVSQPIDMMKIQQKLKMEEYDDVDQLTSDFQLLF
NNAKTYYKTDSPEYRAACKLWDLYLRTKNEFIQRGEYEDDDEDGYNAQENPGGSTEDESA
SACLKEVLEQLLDAVVSYTEPSGRLVSELFQKLPSKMQYPDYYAVIKEPIDLKLIAQKIQ
LGNYRCVSAMAKDVDLLVKNAKAYNEPGSQVFKDANTIKKVFAQKKSEMEHGEPIKSSIR
IRNKRSVQGDRLSAITMALQYESDEEGILSGTVHYDEGESEAESMTSNIDMSNPIFQLYE
AVRGARNSQGQLISEPFLQLPSRKDYPDYYQQINQPVCLHQIKNKMKNNEYESVEHIDSD
LMLMFENAKRYNVPHSSIYKRALKLQHIQQMKRKELLQRTDDDGDSMLSSATSDTSSTKR
KSHKKNTKKNRMKALLGSVTEAREAGTGRRLCDLFMVKPSKKDYPDYYKVILEPMDLRTI
DYNIRSEKYMTEDAMVEDMKLMFRNARHYNEEGSQVYNDADILEKIMEDRRRDLGPATDD
DDIMSPKLKIRKNSLSLKKSKYLTPLQQKLNELYEAVKNYTDKRGRRLSTIFLRLPSRAE
LPDYYIAIKKPVDMEKIKSHMLGNKYQDVDALVEDLVLMFNNACTYNEPESLIYRDALLL
HKVLLETRRDLEGGEDNHLPDVPRLIQELIRSLFVSVLGHQDDEGRCYSDSLAEISAVDP
TNPEKPALNFDIVRKNVERGRYKRLDVFQDHMFEVLEKARRLNRTDSEIFEDAVELQQFF
IRIRDELCKNGEILMSPALSYTSKHLHSDVEKEKKEKLPKEIEEDKIKREEEKREAEKRE
GTVGGSWQVQRTYSQDCSFKDSMYHVGDYVYVEPAEPNLQPHIIYIERLWEDDTGEKWLY
GCWFYRPNETFHLATRKFLEKEVFKSDYYNKAPISKILGKCVVMFVKEYFKLSPEGFRQE
DVYVCESRYSAKSKSFKKIKMWAMPLSSVRFVPRDVPLPVVRVASMFVTKQDEKPTEIVE
ESKMTDGIIDKEREDVPLDVTNGEPGCQYYEQLCYNNLWLKVGDCVYIASHGLVRHRVGR
IEKMWMRDEAGYFFGPIFIHPEETEHEPTKMFYKKEMFLSNLEETCPMTCIIGKCVVASF
KEYLSCRPTEVPEENVLLCESRYIESEKQMKKFKGLKRFSLSGKVVEDEIYYFRKLIVPQ
KEPSPLLDRKIEELEAKFADMTDEELEDLGDDDGELGDHSLPQMQSSMNSDMDMMSYTPP
QSTPKSMKGLAKKEASKRKINMSGYILFSSEMRAVIKAQHPDFSFGDLSRLVGTEWRNLD
SSRKAEYEERAAKVAEQQERERGHHQTSPRAGVNGLGIGSAAGNMHGSQVGLGSGQQAPP
PYPGQSHLGQPALHQPSTPVFVSPPAKSQRLLHSEAYLRYIEGLNAESSTVSKWDHALTV
KKQDVRLTKEQESRLPSHWLKSKGAHKTMADALWRLRDLMMRDTLNIRQMHNQ
NT seq
4662 nt
NT seq
+upstream
nt +downstream
nt
atggccttgaaaaggagacgggcgacgtccccttctagcagtgtgagtggaggagatttt
gacgatagccagacttcgttagtgtcttcaattgggagaaagaggagaaggacctcaaac
attccgactgtggatcctattgctgtatgccatgagctgtacaacacaatcagagattac
aaggatgaccacggccggatgctgtgtgagctgttcatcagagcacccaaacgaaggaat
cagccagactattaccatgtggtgtctcagcccattgacatgatgaagatccagcagaaa
ttaaagatggaggagtatgatgatgtcgatcagttaaccagtgacttccagcttctgttc
aacaatgcaaagacttattataagacggacagtcctgagtacagagcagcctgcaagctg
tgggacctctacctccggacgaagaatgagtttattcaaaggggtgaatatgaagatgac
gatgaagatggatacaatgcacaagaaaaccccggaggttccactgaagatgagagtgca
tcagcttgtttgaaagaagttctggagcagctccttgacgctgttgtgtcctatactgag
ccgagtggtcgcctggtcagcgagctcttccagaagcttccatccaaaatgcaatatcca
gattactatgctgtaattaaagaaccaatagatctgaaactcattgctcagaaaatccag
ctgggcaattatcgatgtgtcagcgccatggctaaagatgtggacctgctggtgaagaat
gccaaggcctacaatgagcctggttcacaggtttttaaggatgctaacactattaaaaag
gtttttgcacaaaagaagtctgagatggaacatggagagccaatcaagtccagtattcgc
atcagaaataaaaggtccgtccagggagaccggctctcagctatcactatggctcttcag
tatgaaagtgatgaggagggcatactttctgggactgtccactatgatgagggtgaatcc
gaagcagagagtatgacttcgaacattgacatgagcaaccccatcttccagctttatgaa
gctgttcggggagccaggaacagtcagggccagctgatttctgagcccttcctacagctg
ccctctaggaaagactatcccgattattaccagcagatcaatcagccggtctgcctgcat
cagatcaagaacaaaatgaagaacaatgaatacgagagtgttgagcatattgactccgat
ctgatgctgatgtttgagaatgccaagcgctacaacgttccccactcctccatctacaaa
cgtgcgctcaagcttcagcacatccagcagatgaaaagaaaggagcttttgcagagaaca
gatgatgatggtgacagcatgctctcctcggccacgtccgacaccagcagcacaaaaaga
aaaagccacaagaaaaacacaaagaaaaatcgaatgaaagctctcctaggctctgttact
gaagccagagaggccgggactggccggagactctgtgacctcttcatggtgaagccatct
aagaaggactatcctgattactacaaagttatcctggaaccaatggacctcaggaccata
gactacaacatccgctcagaaaagtacatgactgaggatgcaatggtggaggatatgaag
ctgatgttccgcaatgccaggcattataatgaagaaggctcccaggtctacaatgacgca
gacattcttgagaagatcatggaagacagacgcagagatcttgggccagcaactgatgat
gatgatattatgtctccaaagttaaaaataagaaagaacagcctctctctgaaaaagtcc
aagtacctgacacctttgcagcagaaactaaatgagctttatgaagccgtaaagaactac
acggataagcgaggccgtcgcctcagcacaatcttcctgcgacttccatctcgtgctgag
ctgccagattactacatcgccatcaagaagcctgtagacatggagaaaattaagagccac
atgctgggtaacaagtaccaggacgtggacgcgctggttgaagacctggtgctcatgttc
aacaatgcgtgcacctacaacgagcctgagtctttgatttaccgcgacgctctgctgttg
cacaaggtgctattggagacgaggcgggacctggaaggaggagaggacaatcaccttccc
gatgtgcctcgactcatccaggaactcatccggagtctcttcgtatctgtgctcggtcac
caagacgatgaaggacgttgttacagtgattctcttgcagagatttctgctgtagatccc
accaacccagagaagccagcgctcaatttcgatattgtcagaaaaaatgtggaaaggggc
cgctacaagaggctggatgtatttcaggaccacatgtttgaagttctggaaaaggccaga
cgattaaataggactgactcagagatctttgaggatgcagtggagctgcagcagtttttc
attcgtatcagagatgagctgtgtaaaaatggagagatcctaatgtcccccgccctcagc
tacacttcgaagcatttgcacagcgatgttgaaaaggaaaagaaggaaaagcttcccaaa
gagattgaggaggacaaaattaagagagaagaggagaaaagggaggcagagaagagagag
ggcactgttggaggctcgtggcaggttcagcgtacgtacagtcaggactgcagcttcaag
gacagcatgtaccacgtgggagattatgtttatgtggagcctgcagagcctaacctccag
ccacatatcatttatattgaacgcctttgggaagatgatacaggggaaaagtggctgtat
ggctgctggttctacaggccaaatgaaacatttcatctagcaacaagaaaattcttggag
aaagaagttttcaagagcgattattataacaaagctcctatcagcaaaattctggggaag
tgcgtggtcatgtttgtgaaggagtacttcaagctttccccagaaggattcaggcaggag
gatgtctacgtctgcgagtctcgctattctgccaagtcaaagtccttcaaaaagatcaag
atgtgggccatgcccctcagctcggttcgatttgttcccagagacgtccccctgccggtg
gtccgagtcgcttctatgtttgtgaccaaacaagatgaaaagccaacagagattgtagaa
gaaagcaaaatgactgatggtattatagacaaagagcgggaggatgttccactggatgtg
accaacggagaaccaggctgtcagtactatgagcaactctgttacaacaacctgtggctg
aaagtgggagactgtgtttacattgcttctcatggactggtgcgccaccgagtgggcaga
attgagaaaatgtggatgcgagatgaagcaggctacttctttggtcccatctttatccat
cctgaagagacagagcatgaaccaactaagatgttctacaagaaggaaatgttcttaagc
aacttggaggagacttgtcccatgacctgcatcataggaaagtgtgttgtggcatcattc
aaagaatacttgtcttgtcggcccactgaagtgcctgaagaaaacgttcttctctgtgag
agtcgctacatcgagagcgaaaagcaaatgaagaagttcaagggtcttaagcgtttttcc
ctctctgggaaggtagtagaagatgaaatctactatttcaggaagctgatagttccccag
aaagaaccatctcctctgctggacaggaaaattgaggaacttgaagctaagtttgctgat
atgactgatgaagagctggaagatcttggggatgatgatggggagctgggggatcattcc
cttcctcagatgcaatcctctatgaatagtgacatggacatgatgtcatacacccctcca
cagtcaactcctaaatccatgaaggggcttgcaaagaaagaagcttcaaagcggaaaatc
aacatgagtggctacatcctgttcagtagtgagatgcgagcggtcatcaaagctcagcac
ccggacttctcttttggggatttgagtcgtcttgttggcacagagtggaggaacctggac
agttcccggaaagcagagtatgaagagcgagcagctaaagttgctgaacaacaggagcgc
gagaggggtcatcatcagacgtccccaagagcaggtgttaacggcctgggaattggatca
gcagcaggaaacatgcatggatcacaggtgggtttgggctcgggacagcaggctcctcct
ccatacccaggacaaagccatctgggtcaaccagctctccaccagccctccactccagtg
tttgtgtctccccctgccaaatctcagcggctgctgcactcagaggcctacctcagatac
attgagggcctcaatgcagaatcttccactgtcagcaaatgggaccatgctctcacagta
aaaaaacaagatgtgcgtctgacaaaagagcaagaaagcagactgccgtcccactggttg
aagagtaagggggcccacaagaccatggcagatgcactttggcggcttcgtgacctgatg
atgcgcgacacccttaacattcgtcaaatgcacaaccagtag
DBGET
integrated database retrieval system
