Xiphophorus maculatus (southern platyfish): 102223545
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Entry
102223545 CDS
T02923
Name
(RefSeq) glutamate receptor ionotropic, NMDA 3B-like
KO
K05214
glutamate receptor ionotropic, NMDA 3B
Organism
xma
Xiphophorus maculatus (southern platyfish)
Pathway
xma04020
Calcium signaling pathway
xma04080
Neuroactive ligand-receptor interaction
xma04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
102223545
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
102223545
04082 Neuroactive ligand signaling
102223545
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
xma04040
]
102223545
Ion channels [BR:
xma04040
]
Ligand-gated channels
Glutamate (ionotropic)
102223545
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
ANF_receptor
MS_N
Motif
Other DBs
NCBI-GeneID:
102223545
NCBI-ProteinID:
XP_014324325
Ensembl:
ENSXMAG00000015962
UniProt:
A0A3B5RCR5
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Position
19:complement(26741714..26862974)
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AA seq
1337 aa
AA seq
DB search
MVSLSGLWSRCLAPGRTRLLFISVRVLPLLLLLLLTPFSSAETCFPHPAPCHILARIGHT
VRLGALLPTRQPARIQNALNRALASIRHQSSGTDSTTASAQPAPLLPYNLTLEMVVRSPA
GWDPESLSHSACQDLVIRGVTAVLAFPRSREELIQVEFLSSFLEIPFVSILEDTEPLVTK
NRFHLQMSARVPPSTLGSLLLAVLQSGDGDRDRGSRGEGRWGGAAVICPGWDEGSDGLLT
HLQKHSGPAWHLWDIINLTLITGSKERRGEASEERREDQMEEEALNIISSSFLRSPSPIS
SVLLMGSDPECLSSVLRAAQRLAPSLPALQWIMGYPLSPDSLHTLGGPLGLLAYGEVGRK
PISFYIRDALQLVGRAVTTATMVKPELALVQNLVNCYDTPNRHELPSSGQYLSRFLSNIS
FTGSTGLIQVDAGVSRVLSSQLFHVWSLKRGALGQPAWVTVGQWTRGRLELEGGILGLVG
GLGNSQGQGLGAGVRGGDGQGDGYFGGRWRPGLSVEEHRLRVVTLVEHPFVFTREVDEDG
LCPAGQLCLDPKTNRTDVINGLFNQLHNPNSTVIDWEGIDLPGDLRKCCYGYCIDLLEKL
AEDMGFTFDLYIVGDGKYGALSGTGRWTGLVGDLLNGTADMAVTSFSINSARSRVIDFTS
PFYSTSLGILVRSRDTAAPIGAFMWPLHWSMWVGIFVTLHLTALFLTLYEWNSPFGMTPH
GRNRLRVFSYSSALNLCYAILFGRTVATKTPKCWTGRFLMNLWAIFCLLVLSSYTANLAA
VMVGEKTFEQVSGIHDEKLHHPSLGFRFGTVRESSAEDYMKKSFPEMHDYMRRYNQPTTP
EGVHMLKTDPPALDAFIMDKALLDFEVSIDADCKLLTVGKPFAIEGYGIGLPQGSPLTRN
VSEFVSRYKSDGFMDMLHDKWYKVVPCGKRVFAVTETLQMGIQHFSGLFVLLCMGVGGAL
LTLAGEHTFYHLVVPRLRRSNTLQYWLHTSQKIHRALNTTYEDVGKELTGLDQKPSSCIS
ENCTLHRKQHQPSPPSPPTSLPASTTAGETGSSSPSHEPKEKRVHFDLDTLHSYRLRTHT
ASVRGRPGMVGRPGLGLGGFGFSSLGSFTSPPQINLHVNGGPVSTLASTGLVLSPLGNRA
TQTSLWEGELQELQVKIETFRNQLREALARRAEIQTSLDRERSGLVRRDTSLERERDRQK
VQTINTDRSSSTLSKLPERDRTSQLQTLNNQQTGRPSQTAGAGTAGLGWTSQLNTVNSLD
RGRATQSRPVVTVTGERTVQSRPSSLERSQVNQQGAGNITVQTRNTSSLDRQKANLSRTL
NTLERTKASQSSVSSGT
NT seq
4014 nt
NT seq
+upstream
nt +downstream
nt
atggtgtctctttctggactctggagccgctgcctcgccccggggagaacccgtctcctt
ttcatctctgtcagagtgcttccgctgctgcttctcctcctgctgactcccttctcctct
gccgagacctgcttccctcacccggcgccctgccacatcttggcacggatcggacacacc
gtgcgcctcggtgcgctcctgccgacccgccagccggcgcggatacagaacgcgctcaac
cgcgccctggcgagcatccggcaccagagcagcgggacggactccaccaccgcttccgcc
cagccggcccctctgctgccctacaacctgaccctggagatggtggtgcggtcgccggcg
gggtgggacccggagtcgttgtcccacagcgcctgtcaggacctggtgatcagaggcgtg
acagccgtgctcgcctttccacgctccagggaggagctgatccaggtggagttcctctcc
tctttcttggagattcccttcgtgtccatcctggaggacacggaaccccttgtgactaag
aaccggtttcacctccaaatgtcggcccgcgtgcctccatcaacccttggcagcttgctg
ctggcggtcctgcagagtggcgacggggacagggacagagggagccgaggagaaggcaga
tggggaggtgcagctgtgatctgccccggatgggatgaaggcagcgacggcttgctgact
cacctgcagaagcacagcggtcctgcttggcatttgtgggatattatcaacctgacgctc
atcaccggcagcaaagagagaaggggggaggccagcgaggagaggagggaggatcaaatg
gaagaagaggctttgaacatcatctcttccagtttcctgcgctccccctcgccgatctcc
tccgtgctactcatgggatctgacccggagtgtctctcatctgtcctgcgagccgctcag
cgccttgccccgtcacttccagcgctgcagtggatcatgggatatcctttgtcccctgat
tcactgcacactctgggaggtccccttggactgctggcctatggggaggtgggacgcaag
ccgataagcttctacatacgggatgccttgcagctagttggtcgagcagtcactacggcc
accatggtgaagccggagttagcgctggttcagaacttggtaaactgttacgacacacca
aacaggcatgaactaccgtcttctggacagtatctttccaggtttctgtccaacatctct
ttcactggctctacgggactgatccaagtggatgctggtgtttctcgagtcctttcgtca
caactgttccatgtatggagtcttaaaagaggtgcgctgggtcagccagcgtgggttact
gtaggacagtggacccgtggtcgactagaacttgagggaggcattttgggacttgtggga
ggactcggcaacagccagggacaaggccttggagctggtgtcagaggaggggatggtcaa
ggggatggctattttggaggacgctggagaccaggactttccgtcgaggaacaccgcctc
cgtgtggtgacattggttgaacatccatttgtcttcacgcgggaggtcgacgaggatggt
ctgtgtccagcaggtcaactctgtctggatcctaaaaccaatcggactgatgtaatcaac
ggcctcttcaaccagcttcacaaccccaactctacagtgatagactgggaaggaattgat
ttgccaggggatctaaggaaatgctgctatgggtactgcattgacttgttggagaaactg
gcagaggatatgggatttacctttgacctttacattgtgggagatggaaagtacggcgcg
ttgagcgggacgggacgctggactggccttgtgggggacctcttgaatggaacagccgac
atggccgtcacctctttctccatcaactctgccaggagcagagtgatagatttcacttct
cccttttactccaccagtctgggaattctggttcgtagccgggacacggcagcgcccatc
ggagccttcatgtggccgctccactggtccatgtgggtcggcatttttgttacgttgcac
ctcacagcactcttcctcaccttgtacgagtggaacagcccgtttggcatgaccccccat
ggcagaaacaggctgcgtgtgttctcctactcgtctgccctcaatctctgctacgcaata
ctcttcggacgcaccgtcgccaccaagactcctaaatgctggacgggacgcttcttgatg
aacctctgggctattttctgcttactggtgctgtccagctacacagccaaccttgctgct
gttatggttggagagaaaactttcgagcaggtttcaggaattcacgacgagaagctgcac
catccctctctgggcttccgttttgggacggtgagggagagcagcgccgaggactacatg
aagaagagtttcccagagatgcacgactacatgagacgctacaaccaacccacaacgcca
gagggtgtgcacatgctaaagacagatcctccggctctggatgcattcatcatggataaa
gccctgctcgactttgaggtctccattgatgcagactgcaagctgctcacagtggggaag
ccttttgccattgaaggctacggcataggccttccccagggctctcctctgacccgtaat
gtgtcggagtttgtgagtcgctacaagtctgacggcttcatggacatgctgcatgacaaa
tggtataaggttgtaccctgcggaaagagagtctttgcagtcaccgagactctgcagatg
ggcatccagcatttttcaggtctgtttgtgttgctgtgcatgggtgtcggcggagctctg
ctgaccttggcaggtgaacacaccttctatcacctggtggtcccccgcctccggcgctcc
aacaccctgcagtactggctgcacaccagccagaaaatccacagagcgctcaacactaca
tatgaggatgtcgggaaggagctgaccggccttgaccaaaagccctcctcttgtatctca
gaaaactgcaccttacacaggaaacagcatcagccttctccgccgtcacctcccacatcc
ctccctgcttccaccacagctggtgaaaccggaagctcctcgccgtctcatgaacccaag
gagaaacgcgttcactttgacctggacacgcttcacagctaccgcctgcgcacgcacaca
gcgtcggtgcgtggccggccgggcatggtcggccgtcctggcctcggtctgggagggttt
ggcttcagcagcctgggcagctttacctccccgcctcagatcaatctccatgtcaacgga
ggaccggtctctacccttgcgtccacgggtttggtcctctctcccctgggaaatagggct
actcagaccagcctgtgggagggggaactgcaggagcttcaggtgaagatcgaaaccttc
cgcaaccagctgagagaagctctggcacgaagagctgagatccagaccagcctggacaga
gagaggagtgggctggtacgaagggacaccagtctggagagggaaagagacagacagaag
gtccagactatcaacacagacagaagcagttccactctgtccaaactcccagaaagagac
aggaccagccaactgcaaaccctgaacaatcagcagacaggaaggcccagccagacagct
ggagctggtaccgcggggctcggatggaccagccagttaaacacagtgaacagtttggac
agaggaagagccactcaatcacgccccgtcgttactgtgacaggagaaaggactgtccag
tcacgcccttcgagtttggagcgaagtcaagtcaaccaacaaggtgctggaaacataact
gtccagacaaggaacacttctagcctggacagacagaaggccaacctatcacgcactctg
aacactttggagaggacaaaagccagccagtcaagtgtaagcagcggaacctga
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integrated database retrieval system
