Xiphophorus maculatus (southern platyfish): 102223566
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Entry
102223566 CDS
T02923
Symbol
scarb1
Name
(RefSeq) scavenger receptor class B member 1 isoform X1
KO
K13885
scavenger receptor class B, member 1
Organism
xma
Xiphophorus maculatus (southern platyfish)
Pathway
xma03272
Virion - Hepatitis viruses
xma04145
Phagosome
xma04977
Vitamin digestion and absorption
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
102223566 (scarb1)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
102223566 (scarb1)
09150 Organismal Systems
09154 Digestive system
04977 Vitamin digestion and absorption
102223566 (scarb1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xma04131
]
102223566 (scarb1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
xma04147
]
102223566 (scarb1)
Membrane trafficking [BR:
xma04131
]
Endocytosis
Phagocytosis
Scavenger receptors
102223566 (scarb1)
Exosome [BR:
xma04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
102223566 (scarb1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CD36
Gram_pos_anchor
NEDD4_Bsd2
PorA
Motif
Other DBs
NCBI-GeneID:
102223566
NCBI-ProteinID:
XP_023194165
Ensembl:
ENSXMAG00000018667
LinkDB
All DBs
Position
8:25503636..25525436
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AA seq
507 aa
AA seq
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MAVNKSKVSVGFIAVGVLTALFGIVLVFVGPIVIDDQVVKNTIIDPKNDLSYTMWKDLPV
PFFMSVYFFHVLNPEEILNGEKPMVEQRGPYVYRKQCRKENITFHPNSTVSYREYRRYFF
EPSMSVGNESDVITIPNMLVLGASVMLEDLPYALRLLISATFKTFKEGPFLTKTVEELMW
GYDSKLVEFLNKYLPGMLPSTGKFGLFAEFNNSNTGLFTIHTGRDDIRNVHKVDSWNGLT
ELSYWRTPQCNMINGTAGQLWPPFMTKETTLPFYSPDACRSLELVYQRPGVMKGIPLYRY
VAPKTMFANGTDYLPNEGFCPCRQSGLLNVSSCRYNSPVFISHPHFFNADPVLLDYVLGL
DPTEEEHGLFIDIHPLTGVPLNVSIRLQLNLYMKRISGITETGKISEVVMPMLWFEENGY
IDGPILTTFHTNLVILPAVMEYMQYIFIALGLLTTIVAVLVYYKVKKSSNRAATSPFFEN
SWATSSEEGKGSHGFETQDKSMRYSGL
NT seq
1524 nt
NT seq
+upstream
nt +downstream
nt
atggctgttaataaatccaaagtctcagtcggattcatagcagtaggcgtcctgactgcg
ttattcggtatcgttctcgtttttgtggggccaatagtcatcgatgaccaagtagtaaag
aacaccatcattgatccaaagaatgacctctcctacaccatgtggaaggacctccctgtg
cccttcttcatgtccgtctacttttttcatgtcctcaaccctgaggagatcctgaatgga
gaaaagcccatggtggagcagagaggaccgtatgtgtacagaaagcagtgtcgaaaggaa
aacatcacttttcaccccaacagcaccgtgtcctacagagaataccgcagatacttcttt
gagccctccatgtcggttgggaacgagtctgacgtcatcaccattcccaacatgttggtg
ctgggcgcatcggtgatgctggaggacctgccctatgcactgcggctgttgatcagcgcc
accttcaagacgttcaaggaaggtcccttcctgaccaagacggtggaagagctgatgtgg
ggctatgacagcaaactggtcgagttcctcaacaagtacctgccgggcatgctgccgtcc
acaggaaagtttggcctctttgcagagtttaataactccaatactggtctattcaccatc
cacaccgggagagatgacatcagaaacgtccacaaagtcgactcctggaatggcctcact
gagctgagctactggaggacacctcagtgtaacatgatcaatggaacagccgggcagctg
tggcctccttttatgacaaaagagaccactctgcctttctacagcccagacgcctgcaga
tctctggagcttgtgtatcagcgaccaggcgtgatgaaaggcatccctctgtatcgatat
gtcgctcccaagaccatgtttgcgaatgggacggattatcttccaaatgaaggcttctgc
ccctgcagacagtctgggctgctcaacgtcagtagctgccgctacaactctccggtcttc
atctctcatcctcacttctttaatgctgatcctgtgctgctggactacgtgctgggtctt
gaccccactgaagaggagcacggccttttcattgacattcatcctctcacaggtgtccct
ctgaatgtctccatacgtctacagcttaacctctacatgaagagaatatcaggaattaca
gaaactggaaagatttctgaggtggtgatgcccatgctgtggtttgaggagaacggatac
attgatggaccaatcctcactacgttccacactaacctggttattctccctgctgtcatg
gagtacatgcagtacatcttcatagccctcggcctgctcaccaccatagtggccgtcctg
gtgtattacaaagtcaagaagtctagtaatagagcagcgacttctccattctttgagaat
tcttgggcaaccagtagtgaggagggtaaaggctcacatggctttgaaacacaggacaaa
agtatgaggtattcaggcttgtga
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