Xiphophorus maculatus (southern platyfish): 102223582
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Entry
102223582 CDS
T02923
Name
(RefSeq) hypoxia-inducible factor 3-alpha-like
KO
K08268
hypoxia-inducible factor 1 alpha
Organism
xma
Xiphophorus maculatus (southern platyfish)
Pathway
xma04137
Mitophagy - animal
xma04140
Autophagy - animal
xma04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
102223582
04137 Mitophagy - animal
102223582
04148 Efferocytosis
102223582
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xma03000
]
102223582
Transcription factors [BR:
xma03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
102223582
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
bHLH_HIF1A
PAS_3
PAS_11
PAS
HIF-1
PAS_9
PAS_4
Motif
Other DBs
NCBI-GeneID:
102223582
NCBI-ProteinID:
XP_005812034
Ensembl:
ENSXMAG00000003186
UniProt:
M3ZLV4
LinkDB
All DBs
Position
18:complement(4770947..4789847)
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AA seq
650 aa
AA seq
DB search
MEKEDGVVAVKRSSSEQRKLRSRDAARCRRSQETEVFYELARTLPLPRRVCTHLDKAGIM
RVTLSFLRMQQLLQPEESVKKEEEDEDPMDAFFPQALAGFVMVMTEEGDMVFLTENVNKH
IGITQLELLGQSVYDFIHPCDQEELRDLLTPRPGLSKKLMAEQPSERNFFLRMKSTLTSR
GRTVNIKSATWKVLHCTGHIRPFGSASPPAARVMTLLCEPIPHPSSVEFPLDSCTFLTRH
TMDLRFTHCEGRVTELVGYKPEDLIGRSAYEFYHALDSDRIKKSLLTLLSKGQVNSSPYR
FLANCGGFVWAETQATVLYSKTSQPEAIVCLNFILSAVEQPDVVFSVEQTRCSLLPKTEP
SSPERAAEDSGISDTCDSDGEDAGSSAKLLLKLTEKPEELLQLPDGGDGVAPALTAGRVE
LSFASPPSPDVVPDHPKDLCSPQLRQLLSPIFDGLNPSSSPAASSEPDLSPCEEEVMDTS
EVERFFTICPEETQLKEQAIEDVEGKELEMYAPYISMDDDFQLTFLSNLPQEANKPASLL
FQGTDGIPAVTVSRKRTHDLDKEPPPLLMIQDKRHKPDPSSIEEELLLSNRLLGSLEDGD
QPDLILDSRRSQLLTDRDPVLSELCDTAVLMRDIFIPRPADLSPPLSPMT
NT seq
1953 nt
NT seq
+upstream
nt +downstream
nt
atggagaaggaagacggggtcgtggcggttaaacggagcagctcggagcagaggaagctc
cgctctcgcgatgcggcccgctgccggcgcagccaggagaccgaggtgttctatgaactg
gcccggaccctgccgctgccgcgccgagtctgcacccacctagacaaagccggcatcatg
agggtgacgctcagcttcctgcggatgcagcagctcctgcaacccgaagagagtgtgaag
aaagaggaggaggatgaagatccgatggacgctttcttcccccaggccttggcgggcttc
gtcatggtgatgaccgaggagggggacatggtgttcctgacggagaacgtcaacaagcac
atcggcatcacgcagctggagctgctcggccagagcgtctacgacttcattcatccctgc
gatcaggaggagctgcgagacctcctgactccgcgtccaggtctgagtaagaagctgatg
gcggagcaaccgagcgagagaaacttcttcctgcgaatgaagagcaccctgaccagcagg
gggcgcaccgtcaacatcaaatctgccacctggaaggttctccactgcacgggccacatc
cgcccctttggctcagcgtcgccccctgctgccagagtgatgacgctgctgtgcgagccg
atcccccacccgtccagcgtggagttccctctggacagctgcaccttcctcacccgccac
accatggacctgcgcttcacccactgcgagggcagggtaacggagctggtgggctacaaa
ccggaggacctgattggacgctcggcctacgagttttatcacgcgctcgactcggatcgc
atcaagaagagcctgctaacacttctctccaaaggccaggtgaactcttccccctaccgc
ttcctggccaactgcggcggcttcgtgtgggccgagactcaagccaccgtcctctacagc
aagacgtcgcagcccgaagccatcgtctgcctcaacttcatcctcagcgcggtggagcag
ccggacgtggtgttctccgtcgagcagacccgctgcagcctcctgcctaaaaccgagccc
tcctccccggagcgcgccgccgaggacagcggcatctccgacacctgcgactctgacggc
gaggacgccggcagctcggcgaagctcctcctgaagctgacggagaaaccggaggagctg
ctgcagctgccggacggcggggacggcgtggcgccggcgctgacggcaggtcgggtggag
ctgtcgttcgccagtcctcccagtccagacgtggttccggaccatcctaaggacctgtgc
agccctcagctgcggcagctgctgtcgcccatcttcgacggcctgaatccgtcctcgtcc
ccggccgcctcctctgagccggacctgagcccctgtgaagaggaggtgatggacaccagc
gaggtggagcgcttcttcaccatctgcccggaggaaacgcagctcaaggaacaagccatc
gaggacgtggaggggaaggagctggagatgtacgcgccgtacatctccatggacgacgac
ttccagctcaccttcctcagcaatctgccgcaggaagccaacaaacccgcgtcgctgctg
ttccagggcaccgatgggattcctgccgtcaccgtcagcaggaagaggactcacgacttg
gacaaagagccgccgcctctgctgatgatccaggacaagagacacaagccggacccgtcc
tccatagaggaggagctgctgctcagcaacaggctgctgggttcgctggaagacggcgac
cagccggatctgattctggactccagacgcagtcagctactcacagacagagacccggtt
ctgtcagaactgtgcgacaccgcagttctgatgagggacatcttcatccctcgcccagct
gacctgtcgccgccgctctcgcctatgacctga
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integrated database retrieval system
