Xiphophorus maculatus (southern platyfish): 102223600
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Entry
102223600 CDS
T02923
Symbol
snapc4
Name
(RefSeq) snRNA-activating protein complex subunit 4 isoform X1
KO
K09453
snRNA-activating protein complex subunit 4
Organism
xma
Xiphophorus maculatus (southern platyfish)
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xma03000
]
102223600 (snapc4)
03021 Transcription machinery [BR:
xma03021
]
102223600 (snapc4)
Transcription factors [BR:
xma03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-like factors
102223600 (snapc4)
Transcription machinery [BR:
xma03021
]
Eukaryotic type
RNA polymerase III system
Other transcription-related factors
snRNA-activating protein complex (SNAPc)
102223600 (snapc4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myb_DNA-binding
Myb_DNA-bind_6
Motif
Other DBs
NCBI-GeneID:
102223600
NCBI-ProteinID:
XP_023199640
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All DBs
Position
12:1381457..1391752
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AA seq
1388 aa
AA seq
DB search
MSLSAQRDRVQRQVEELERSLAVTRDELDLLSSETDDGSESQDEEGQEGQSPADLLAQKQ
KIQSEIQNLEDMLGPRSASLDVSSEDSSDSSDRSEPDLSPSASSCLQLNLVYQQVVQETL
DQLEALLAHNRRQQRELTAQMNGPIRESTREGPASSNQHPAKMFLGSFLKPYFKDRLTGL
GPPANQEVKLKAQRMMGCPEDKKLKLKRWESWQKTLLVHSVTRDHLKRLMLPKLSRLDFL
TSKFSSAQGADRQQLTEQINDLEKDLQLLRMKREEELTGDRYEEHDWQKISNIDFEGTKD
AEDIRLFWQNVLHPSINKTAWSSEEVQRLSATCRRHEDRHWDSIAQELGTGRTAFMCLQM
FQRFVSDSLKRSSWTAEEDEQLRELVQKMRIGNFIPYTQISYFMEGRDPTQLVYRWNQVL
DPSLKRGSWTEQEDRLLLQAVARHGEKCWWKVRLEVPGRTDGACRDRYLDCLKKNIKKGP
FERHEVELLEQLVKKHGVGRWAKIAAEIPHRLDAQCLREWRKLVREPAQDRRKIRKTCKK
GGRGGRGRGRGAGGFNVSIRRGILKMKEEEEVQVTEEEDEDEVVQYMDSDEDCNKKRKRS
MEEEEEEEEYILPPMEEWLPAEVKQSSTSLSFTLVELPSSGEAPDRTAVRSTVLGRPRPS
VVIGAPPRELSWEERRSSSAVPMVSREALRLHLSALKQKVGSAPQPGRRPRPQAQELRYE
LQVAVTPWIGNLLIPKSQKRSAADALREAGERSGISTSSAFTLLLQAMNVDTLGCRQMIE
ERKSKADLQAPPHARGPKRVSELLANRKRRSQEEEEDQWRVLLQEKRILQAPPILQAPPI
LQAPPILQAPPILQAPPQHPSSRYPQMFPRSLLVPAASIYFVPSGAPPAPPAPPAPVLPN
PEPSCTSSSVVPVGSSLTSSLARGSPTELKDVGGASDGAAESRSDVGGAKAGVARTGDEG
AKNGADLESGPMDSAGSPEPDRTQNSDGPAAVSSSSSPLTSAPPSCPVQTPPTSTDAAVR
QSGGRKRGLAEAGGAGPVQEGKRTRRPTLKIRESKELQATKKRSSASSKQKRVGRAQSKG
SSAMQAPPHSQAPPLSQVTGLHFLPNRSIWVMTPGSVPVAQAPPPALQVGLLPRGPPLTS
EAPPPLTAGLSSVTPADPRDLQLLPVPTCRFKPLLPAVIQSPDLRPTGWPRPHLLLAYQG
AAGRQTVGPTGPPLPTAGLHFDPTLMFLEPLEEVHDWLRGRGGVVVPGARCALPYLPPSV
SSLSALSGLLRAKASVTASALQLMADGRRPNDHTYCASGELPGRQEELQAVRQLVAQRFS
TNPAHQLLKARFLSLFTLPALLATVQPISRKKPSCPTNQEEEEEEEEELKQIQERQRRRR
VLTGAAVP
NT seq
4167 nt
NT seq
+upstream
nt +downstream
nt
atgtccctgtcggcccagagggaccgggtccagaggcaggtggaggagctggagcgcagc
ctggctgtgacccgggacgagctggacctgctgagcagtgagacagatgatggatcagaa
agtcaggatgaggagggacaggagggacagagcccagctgacctgttggcccagaagcag
aagatccagtcggagatccagaacctggaggacatgctgggtccccgcagcgcgtccctt
gacgtatccagcgaggacagcagtgactccagtgacaggagtgagccggacctgtctccg
agtgcgtcctcgtgtctccagctgaacctggtctaccagcaggtggtccaggagacgctg
gaccagctggaggcgctgctggcccacaaccgcaggcagcagagggagctcacagcccag
atgaacggaccaatcagagagtccaccagagaaggtcccgcctcgtccaatcagcatcca
gctaagatgttcctgggaagcttcctgaaaccgtacttcaaggaccgtctgacgggcctg
ggccctccagccaatcaggaggtgaagctgaaggctcagaggatgatgggatgtccagaa
gacaagaagctgaaattgaaaagatgggagagctggcagaagacgctgctggtccactca
gtgactagagaccacctgaagagactgatgctgcccaaactgtccaggctggacttcctg
acctccaagttttcctcggctcagggagccgacagacagcagctgactgagcagatcaat
gacctggagaaagacctgcagctgctgaggatgaagagagaggaggagcttactggtgat
cgctacgaagaacacgactggcagaagatctccaacatcgactttgaagggacgaaggac
gcagaggacatccgtctgttctggcagaacgtcctccacccgtccatcaacaagacggcc
tggagcagcgaggaggtccagagactgagcgccacctgcaggagacacgaggacagacac
tgggactcgatcgcccaggagctggggacgggcaggacggccttcatgtgtctccagatg
ttccagcgtttcgtctccgactctctgaaacgcagcagctggacggcggaggaagacgag
cagctgagagagctggtccagaagatgaggatcgggaacttcatcccgtacacgcagatc
agttacttcatggagggtcgtgatccgactcaactcgtctacaggtggaaccaggttctg
gacccgagcctgaagagaggctcgtggaccgagcaggaggaccggctcctgctgcaggct
gtggctcgtcacggtgagaagtgttggtggaaggtccggttggaagttcctggacgcacc
gatggagcctgcagagacaggtatctggactgtctgaagaagaacataaagaaaggtccg
tttgagagacatgaggtggagctgctggagcaactggtgaagaaacatggagttggtcgc
tgggccaagatcgccgcagagatccctcatcgcctcgatgctcagtgtctgagagagtgg
aggaagctggtgcgagaacctgctcaggacagaaggaaaatcaggaagacctgcaagaag
ggaggaagaggaggaagaggaagagggcggggtgctggaggtttcaatgttagcatcagg
agaggaatattgaagatgaaggaggaagaggaggtgcaggtaactgaggaggaggatgag
gatgaggtggtgcagtacatggacagtgatgaagactgtaataaaaagaggaagaggagc
atggaggaggaggaagaggaggaggagtacatcctgccgccgatggaggagtggcttcca
gctgaggtgaagcaaagctccacctccctgagcttcacgctggtggaactcccttcctcc
ggcgaggctccggaccgaaccgcggtccgctccaccgtgctgggtcggccccggccctcc
gtcgtcatcggggctccgcccagagagctgtcctgggaggagcgccgcagctcctccgcc
gtgccgatggtgtcccgggaggcactgcgtctccacctgagcgccctgaagcagaaggtc
ggctccgccccccagccagggcggcggccgcgcccgcaggcccaggagctgaggtacgag
ctgcaggtcgccgtcacgccgtggatcgggaacctgctgatcccaaagagccagaaacgg
agcgccgcagatgcgctgagggaggcaggagagaggagcggcatctccacctcctccgcc
ttcacgctgctcctccaggccatgaacgtagacacgctgggctgccggcagatgatcgag
gagaggaagagcaaggcggacctgcaggccccgccccacgcccgggggcccaaacgggtc
tcagagctcctcgccaacaggaagaggaggagccaagaggaggaggaggaccagtggcga
gtcctgctgcaggagaaacgcatcctgcaggctccgcccatcctgcaggctccgcccatc
ctgcaggctccgcccatcctgcaggctccgcccatcctgcaggctccaccccagcaccct
tctagcagatatcctcagatgtttcctcgtagtctcctagtccctgctgcctccatctac
tttgttccttctggagctccacctgctccacctgctccacctgctcctgtgctcccaaac
cccgaaccatcctgcacctcctcctcagtggttccagttggctccagtctgaccagtagc
cttgctcgaggaagtccaacagagctgaaggatgtgggcggagccagtgatggagcagct
gagtctcgtagtgatgtgggcggagctaaagcaggtgtggcgcggacaggtgatgaagga
gcaaagaacggagcggatctggagtctggacccatggattcagcaggttctccagaaccg
gaccggacccagaactcagacggtcctgcagcagttagctcctcctcctcacctctgacc
tctgctccaccttcttgccccgttcagaccccgcccacctccacagacgccgccgtccgt
cagagtgggggcaggaagagggggctggcggaggcgggcggcgccgggccggtccaggag
gggaagagaaccaggaggccgaccctgaagatccgggagtccaaggagctccaggctaca
aagaagagaagctccgcctcctctaagcagaaacgtgttggcagggcccaatcaaaggga
agcagtgccatgcaggccccgccccactctcaggccccgcccctctctcaggtcactggt
ctccatttccttcctaaccggtccatttgggtcatgacccctggttcggtccctgtggct
caggctccgcccccagccctgcaggtggggctcttacccagaggtcctcccctaacgtct
gaagccccgccccctctgacggcaggactgtcctcggtgaccccagctgaccctcgtgac
ctccagctcttacctgttcccacctgtagatttaagcccctcctcccagccgtcatccag
tcacctgatctgaggccgaccggctggccccgcccccacttactgctggcctatcaggga
gcggcggggaggcagacggtgggcccgaccggcccccccctcccgacggcgggcctgcac
tttgaccccaccctgatgtttctggagcccctggaggaggttcacgattggctgagaggg
agagggggcgtggtcgtacctggagcgaggtgcgccctcccctacctgccgccatctgtc
agcagtctgagcgcgctcagtggcctcctgcgggcgaaggcgtcagtgacggcgtcggct
ctgcagctgatggcggacggccgccgccccaatgaccacacctactgcgcctcaggcgag
ctgccagggcggcaggaggagctgcaggccgtccgccagctggtggcgcagcgcttctcc
acaaaccccgcccaccagctgctgaaggcccgcttcctgtccctgttcacgctgccggca
ctgctggccaccgtgcagccaatcagcaggaagaagccatcctgtccgaccaatcaggag
gaggaagaggaggaggaggaggagctgaaacaaatccaggagagacaaaggaggaggaga
gtcctgaccggagctgctgttccctaa
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