Xiphophorus maculatus (southern platyfish): 102223620
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Entry
102223620 CDS
T02923
Name
(RefSeq) voltage-dependent calcium channel subunit alpha-2/delta-2 isoform X1
KO
K04859
voltage-dependent calcium channel alpha-2/delta-2
Organism
xma
Xiphophorus maculatus (southern platyfish)
Pathway
xma04010
MAPK signaling pathway
xma04260
Cardiac muscle contraction
xma04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
102223620
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
102223620
04261 Adrenergic signaling in cardiomyocytes
102223620
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
xma04040
]
102223620
Ion channels [BR:
xma04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
102223620
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VGCC_alpha2
VWA_N
VWA
VWA_3
VWA_2
dCache_1
vWA-TerF-like
DASH_Spc19
VWA_CoxE
Motif
Other DBs
NCBI-GeneID:
102223620
NCBI-ProteinID:
XP_023180763
Ensembl:
ENSXMAG00000016776
LinkDB
All DBs
Position
20:15618013..15837895
Genome browser
AA seq
1113 aa
AA seq
DB search
MAICAQSIGVFCLFAVQTVLIICVSTPTAGTHHFPQHYTMIHWAGRIEKELEKVLQHVTG
AQQMRSIYNEKKSQFEIKRNNPKDLVERVARDISKLLNSKSKALEKLVREAEQLQKEHVW
KDGVTENAISYYDSKADSDYQTEDGEEEAPLETSSSLELEFVDDPNFKNKVNYSSSAVQI
PTDIYKGSPVILNELNWTQALERVFIENRREDSSLRWQVFGSATGVTRYYPATPWRAPNK
IDLYDVRRRPWYIQGASSPKDMVIIVDVSGSVSGLTLKLMKTSVIAMLDTLSDDDYVNVA
KFNEKAEAVVPCFRTLVQANVRNKKIFKDAVKHMQAKGTTDYKSGFTFAFEQLLNESSAP
RANCNKMIMMFTDGGEDRAQEIFEKYNWPNKTVRVFTFSVGQHNYDVTPLQWIACANKGY
YFEIPSIGAIRINTQEYLDVLGRPMVLAGPKGKQVQWTNVYQDALGLGLVITGTMPVFNL
TADSASSQNQLILGVMGVDVAINEIKKKTPTYRLGANGYTFATDPNGYVLLHPNLRPKII
NFREPVTLDFLDAELEDNNKEEIRRQMIDGKSGQRKIKTLIKSVDERYIDEAMRTYTWTP
VEGTNYSLGLVLPTYSENHVKANLSDQILQVQFSYIKDFESLLPNSFESEGHVFIAPREY
CNDLELSNNNTEFLLNFIALMEKVTPDSKQCDSLLLHNLILDTGIIRQLVDKVWKNKDLN
TYGFLAVFAATDGGITRVFPNKAAETWEEDPEPFNASYYRRSLDNKGYIFTAPYRSAGAD
LLNPENDTVGILVSTALDITIGGKTVKPAVLGVKLDLEAWTDKFKILASNHTDSRQGSNT
CGPNRGCEMDCEANSDDLLCYLIDDGGFLIMSNQKDDWSEVGKFLGVVDPNLMYALYNNS
FYKRKQSFDYQSVCELLQNSDTGAARRGVFVPTIADFVNLAWWTSAAAWSLFQQLLYGLA
YHSWFVTDEVEAEVIESKERSCVMIQTQYYFSNLSNSYNILQDCGNCSRLIHAKRINNTN
LLFVVAEKLPCSSCEIEDLSQDKEEFKEENPCEEMTTARYRKGPSTCFDSNAAENTSDCG
RGHSFRPPLYTLLLIQLMLLYSALSPHHHSLLH
NT seq
3342 nt
NT seq
+upstream
nt +downstream
nt
atggcgatctgcgcgcagtcgatcggcgttttctgcctcttcgccgtacaaactgtactt
attatatgcgtctccacaccgacagccgggacccaccacttcccacagcactacacaatg
attcactgggccggacgcattgagaaggagctggaaaaggttcttcagcacgttaccgga
gctcagcagatgagatcgatttataatgagaagaagagccagtttgaaatcaagagaaac
aaccccaaggatctggtggagcgagtggcgcgggacatctctaagctgctaaacagcaag
agcaaagccttagagaaactggtccgagaggctgagcagctgcagaaggagcatgtgtgg
aaagacggcgtgacggagaatgccatttcatactacgattcgaaagcggattcagactat
cagacagaggacggagaggaggaagctccgctggagacctcgtcctccctggagctggag
tttgtcgacgatccaaattttaaaaacaaggtcaactactcctccagtgccgtccagatt
cccacagatatatacaaaggctcgcctgtgatcctgaatgagctcaactggacacaggct
ctggagcgagtcttcatcgaaaaccggcgcgaggacagctctctgcgctggcaggtgttc
ggcagcgccacgggcgtgacgcggtactacccagccactccttggagggcgcccaacaag
atcgacctttacgacgttcgcagaaggccatggtatatccaaggtgcatcgtctccaaag
gacatggtcatcattgtagatgtgagcggcagtgtcagcggactcactctaaagctcatg
aaaacctccgtcatagcgatgcttgacacgctatcagacgatgactatgtcaatgtggcg
aagtttaacgaaaaggcagaggctgtcgtcccgtgcttcaggactttggtccaagccaat
gttcgcaacaagaagatcttcaaggacgccgtcaagcatatgcaggccaaaggaaccaca
gattacaaatcaggcttcacgtttgccttcgagcaacttctcaatgagagcagtgccccg
agggccaactgcaataagatgataatgatgtttacagatggcggtgaagatcgtgctcag
gaaatctttgagaagtataactggcccaacaaaactgttcgagttttcaccttctctgtt
gggcagcataactatgatgtcacccctttgcagtggatagcatgtgctaataaaggttac
tactttgaaataccatcaattggagccatcagaatcaacacacaggaatacctggatgtc
ctgggacgtcccatggtgctggctgggcctaaaggtaaacaggtgcagtggaccaatgtc
taccaggatgctctgggtttggggcttgtcatcacaggaacgatgccagttttcaacctc
actgcagatagcgctagctctcagaatcagctcatccttggggttatgggagtagatgtt
gcaattaatgaaatcaagaagaagactccaacatacagacttggggccaatggctacaca
tttgctactgacccaaacggttacgtgctgctgcatcctaacctaagacccaagatcatt
aacttcagggagcctgtcactctggactttctggatgcagaactagaagataacaacaag
gaggagatccgccgacagatgattgatggcaaatcggggcaaagaaaaatcaagacgctc
attaagtcagttgatgagagatacatcgacgaagccatgcgaacgtacacatggacgccc
gtagaaggtacaaactacagtttagggttggtactgcccacatatagtgagaaccatgtc
aaggccaacctaagtgaccagatccttcaggtgcagttctcatacatcaaggattttgaa
tctctgctgccaaacagttttgagtctgaaggacatgtattcattgctcccagggagtac
tgcaatgatctcgaactttccaacaacaacaccgagttcctgctcaacttcattgccctg
atggagaaggtgactccagactccaagcaatgtgacagtttgctccttcacaatctgatt
cttgacactggcatcatccggcagctggtcgataaagtgtggaagaataaagacttaaat
acatatggcttcctggctgtgtttgctgcaacagatggaggcataacaagagtctttcca
aacaaagctgcagaaacctgggaggaagacccagagccgtttaatgccagctactaccgc
cgtagccttgacaacaagggttacatcttcacagcaccgtatcgatcagctggggccgat
ctgttgaacccagaaaacgacacagtgggaattttggtcagcacggctctggatatcaca
ataggcgggaagacggtcaaacctgcagttcttggagtaaagttagacctggaagcatgg
accgataaattcaagattcttgccagcaaccatacggacagccgtcaaggctcaaatacg
tgtggaccaaacagaggttgtgagatggactgtgaagctaatagtgatgatctcctgtgc
tatttaattgatgacggcggtttcctaatcatgtcaaatcagaaggatgactggagcgag
gtgggcaaatttcttggtgtcgttgacccaaacttgatgtacgctctgtacaacaattcc
ttctacaagcgcaagcagtcgtttgattatcagtctgtgtgtgaactattacaaaacagt
gatactggagcagcaaggcgaggagtgtttgtgcctacgattgcagactttgttaacctg
gcatggtggacgtcagctgctgcatggtccttgttccaacagcttttatacggtttggct
tatcacagctggtttgtcacagatgaggtggaagcggaagtaatagagtcaaaagagagg
agctgcgtgatgatccaaacccagtactacttcagtaacctcagcaactcctacaacatc
ctccaagactgcggaaactgttccaggctgattcatgccaaaaggattaacaacaccaac
ttgctgtttgtggtagcagaaaagctgccatgcagctcctgcgagatagaagatctttcc
caggacaaggaggagttcaaggaggaaaatccgtgtgaagaaatgacgaccgcacggtat
cgaaaaggaccttccacctgtttcgacagcaacgcagctgagaacacgtcagactgtgga
agaggtcactccttccgtccgcctctctacaccctcctgctcattcagctgatgctgctt
tattcagctctcagcccccatcatcactctctgttacattaa
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