Xiphophorus maculatus (southern platyfish): 102223661
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Entry
102223661 CDS
T02923
Name
(RefSeq) latent-transforming growth factor beta-binding protein 1-like isoform X1
KO
K08023
latent transforming growth factor beta binding protein 2/3/4
Organism
xma
Xiphophorus maculatus (southern platyfish)
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
xma04990
]
102223661
Domain-containing proteins not elsewhere classified [BR:
xma04990
]
EGF-like domain-containing proteins
hEGF / cEGF domain-containing proteins
102223661
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_CA
cEGF
TB
EGF
FXa_inhibition
hEGF
EGF_3
Plasmod_Pvs28
EGF_Teneurin
EGF_2
Motif
Other DBs
NCBI-GeneID:
102223661
NCBI-ProteinID:
XP_023206635
UniProt:
M4AKH4
LinkDB
All DBs
Position
18:212068..240861
Genome browser
AA seq
1526 aa
AA seq
DB search
MQQLRLACFPLLFIFLASPGPTRGQTGARRGLERIQVRFTPTICKVLCNQDGCINRCEQG
NVTTLYSADGRATGRRDGAHGPGFRVFLCPLLCKNGGVCLQMDRCLCPANFTGKFCQIPV
PPPGAASTNEIVQPPRPSSAAANQELMRSEFLLPLGQNRAAPPSADSRMVKVRVQHPKEA
SVKIHQVMKVSGSSPAPRTLSSSSSGSAGAPAQAPLPAGGARIQAQTLRGGGTYNPQSGF
KYCFREVKDGQCSSPLPGLRSREVCCRGIGKAWGLTDCSLCPEAPGQRNSSCPVGFERTN
GTQCVDVNECLQPGLCENGICVNTRGSYSCVCRLGFILDATHGICISQSVISEEKGQCYR
VLGSSRGPYTCSLPIVRNITKQICCCSRVGKAWGPDCVRCPYFGSVAFKEICPAGPGYHY
SASTLQISQRADGDSTGREFLLTALDASDPVPGSSGVIAFGSQQRPSSSGSPSGTRTGPV
QVQVPAQLGLTTSSRPTPPAGSATRNAQTRLEVQHGRSDIQNIRLDLALARPQPPLAFPS
SVLRPDPAPVPADSLPTPAPPRTSERGSRPGPEPPGPERRPAANPTNRPARVQPVRGVCQ
IRPGVCERGRCVDLPGGKHTCECDEGFQPNAQRSRCFDVDECQQNPCSNGRCENSPGSFR
CVCYHGYRLAGNTCEDVDECVDPLQCPGQECVNMPGSYRCSPCQPGLGLLNGICTDIDEC
RLSPCSGGRCENTPGSFRCVCRHGYRLQNNTCTDVDECAEPSQCPGQMCVNSVGSYRCVS
CRPGYTLTNRQCTDLDECASAGACDAEQVCVNSVGSFRCDCRPGYRSSGLGRRCTDVNEC
LEGDFCFSRGECVNTPGSYTCVCSPGFRLSENRTACLDVDECVRPGVCSDGRCVNTDGSF
LCQCNSGFSANPEQTACLDVDECVSSGGSVCPSRRCENIIGSFRCLAACQAGQRVAADGS
CVGPAVSAPASAAAATTFSLPAAPRLPSSASESGSRPESTHSSSSSSSGVQISAVDVPAV
LHRQSAAQPGDLRDCYYNLAAGGCSLLAANTSQQECCCTAGEGWGRGCRAHACPAPNTAD
FLSLCPSGWGYVTVGSSAFSYSDVDECKRFQPEVCKNGVCVNNIPGYRCYCSSGFVYSSA
LLECIDYDECEEESCVGGECVNTVGSFYCSCPPPLVVDDTQSNCVNASHLTRDENLSVCW
QHVSADLLCQSPLLGAQVTFIDCCCFYGEGWGMGCALCPRTDSEEYASLCSSYSAAAFPG
SFPDSGRPETGPGRGAAPYGPEFFPAAPLSDVDFSQDYIDYSLAGRSRSDFRARPPVSFS
PPDDAYGGSEFSPGFYPDGDYGSPDGSAPRTPTFRLPPDPRSDIAFVPRPLPPSRSDPPP
LSLAPRPGPPYGDQEEGGDFRGWRPGAGLPPFTDRGGGEGGGPRRVYERRYETHASLSAT
EDCGILHGCENGQCIRVAEGYTCDCYVGFELDLTSMSCIDINECEDAAALPFPCINARCV
NTEGSFRCVCRRGYVMSRRRNHCIAA
NT seq
4581 nt
NT seq
+upstream
nt +downstream
nt
atgcagcagctgagactcgcctgcttcccgctcctcttcatcttcctggcctctcctggg
ccaacgcggggacagacgggagccagaagaggactggagaggattcaggtgaggttcacg
ccgaccatctgcaaggtgctctgcaaccaggacggctgcatcaaccgctgtgagcagggc
aacgtgaccacgctgtacagcgccgacggcagagccacaggaaggcgagacggcgcgcac
ggtcctggcttcagagtcttcctctgcccgctgctctgtaagaacggcggcgtctgcctg
cagatggaccgctgcctctgccccgctaacttcaccgggaagttctgccagatccccgtc
ccgccccccggcgctgcctccaccaatgagatcgtccagccgccgcggccctcctccgcg
gcagccaatcaggagttgatgcggtcggagttcctgctgccgctcggccagaaccgggcg
gcgccgccgtccgcagactcccgcatggtaaaggtcagagttcagcaccccaaagaggcc
agcgtgaagatccaccaggtgatgaaggtgtccgggtccagtccggccccgcggaccctc
tcctcctcctcttcgggttcggctggcgctccggcccaggctccgcttccagcaggtggc
gctagaatccaggcccagactctgaggggcggcggtacctacaacccgcagtctggcttc
aaatactgtttcagagaggtgaaagacggacagtgcagctctccacttccgggtctgagg
agcagagaggtgtgctgcaggggaatcgggaaggcctggggtctcaccgactgcagcctc
tgtcctgaagctccaggtcaaagaaacagcagctgtcctgttggcttcgagcgaaccaat
ggaacgcagtgtgtcgatgtgaatgagtgcctgcagccagggctgtgtgagaacggcatc
tgtgtgaacaccagggggagctatagctgtgtgtgtcggttggggttcatcctcgacgcc
acacatggaatctgcatctcgcagagcgtgatttcagaggagaagggtcagtgctaccgg
gtcctgggctccagtcggggtccgtatacctgttccctgcccatcgtccggaacatcacc
aagcagatctgctgctgcagccgggtcgggaaggcctgggggcccgactgcgtgcggtgc
ccctactttggttcagtcgcctttaaggagatctgtccggccggcccgggttaccattac
tcggcttccactctgcagatcagccaaagagcggacggcgattcgacgggccgagaattc
ctgctgacggcgctggacgcctcagatccagttcccgggtccagcggtgttatagccttc
ggttctcagcagagacctagttcgtccgggtcaccgtctggtaccagaaccggtccagtc
caggtccaggtccctgctcagctaggtctgaccaccagttccagaccgacgccccctgct
ggttcagcaacccggaacgctcagacccgactggaggtccaacatggccgatcggacatc
cagaatatccgactggacctggctctggcgaggccgcagccgccgctggcgttcccctcc
tctgtattgcgacccgacccggcgccagtaccagcagactctctgccgacccctgccccg
ccccggacctcagagcgcgggtccagacccggaccagaaccgcctggtccggagagacgg
ccggctgcaaacccaaccaaccggcccgccagagtccagcctgtccgtggtgtgtgtcag
atcagaccaggtgtgtgtgagcgtggccgctgtgtggatctgccaggtgggaaacacacc
tgtgagtgtgatgagggattccagcccaacgctcagcggagccgctgcttcgatgtggac
gaatgtcagcagaatccctgcagtaacgggcgctgtgaaaactccccagggagcttcagg
tgtgtctgttaccatggttacaggctcgctgggaacacctgtgaagacgtggatgagtgt
gtggatccgctgcagtgtccgggtcaggagtgcgtcaacatgccgggttcgtaccgctgc
tcgccctgccagccgggactcgggttgcttaacggaatctgcacagacatcgacgagtgc
cggctgtccccgtgctccggcggccgctgcgagaacacgcctggcagctttcgctgcgtc
tgtcgccatggttacaggctccagaacaacacctgtacagacgtggacgagtgcgcggag
ccgtctcagtgtccggggcagatgtgtgtgaactctgtggggtcgtacaggtgtgtgtcg
tgtcgtccaggatacacactgaccaacaggcagtgcacagacctggatgagtgtgcgagc
gccggagcgtgtgacgcggagcaggtgtgtgtgaacagcgtgggctcgttcaggtgcgac
tgtcgccccggataccggagctccggcctgggcaggcggtgcacagacgttaacgagtgt
ttggagggcgacttctgcttctccagaggggagtgtgtgaacacacctggatcatacacc
tgtgtttgctcacctggattcaggctgagtgagaacaggacggcctgcctcgacgtggac
gagtgtgtgaggcccggtgtgtgttcagacggccgctgtgtcaacaccgacggctccttc
ctgtgtcagtgtaactcgggcttcagcgccaacccggagcagaccgcctgcctcgacgtg
gacgagtgcgtgtccagcggcggctccgtttgcccgtcgcggcggtgtgagaacatcatc
ggctcgttccgctgcctcgccgcctgccaggcgggtcagcgggtcgctgccgatggctcg
tgcgtcgggccggctgtgtcggctccagcctctgcggcggcggcgacgacgttctcgctg
cccgctgcaccacggcttccatcgtctgcttcagagtccgggtcccgccctgagtccaca
cactcttcctcctcttcctcctccggggtccagatcagtgcggtggacgttcctgcggtt
ctgcaccgccagtctgcggcgcagcccggtgatctgagggactgttactacaacctggcg
gcaggcggctgcagcctgctggcggccaacaccagccagcaggagtgctgctgcaccgcg
ggggagggctgggggcggggctgccgcgcccacgcctgccccgccccaaacacagctgac
ttcctgtccctgtgtcccagtgggtggggctacgtgacggtgggatcgagcgccttcagc
tactcagatgtggacgagtgtaagcgcttccagcctgaggtgtgtaagaacggcgtgtgt
gtgaacaacatcccaggctacaggtgctactgctccagcggcttcgtctacagctccgcc
ctgctggagtgcatcgattacgacgagtgtgaggaggagagctgcgtgggcggcgagtgt
gtgaacacggtggggtcgttctactgcagctgcccgccgccgctggtggtggacgacacg
cagagcaactgcgtcaacgcctcgcacctcaccagggatgagaacctgtccgtgtgctgg
cagcacgtcagcgccgacctcctgtgccagagtcccctgctgggggcgcaggtcaccttc
atcgactgctgctgcttctacggcgagggctgggggatgggctgcgccctctgcccccgc
accgactcagaggaatacgcctctctgtgcagctcctactctgcagcggcgttcccagga
agcttcccagactccggcagaccagaaaccgggccagggcgaggagctgccccctacggt
ccggagttctttcctgcagcgccgctttctgacgtagatttcagtcaagactacatcgac
tactcgctagcagggcgcagcaggtctgacttcagggccaggccgcccgtctccttcagc
ccgccggacgacgcctacggcggctctgagttcagccccggtttctacccggatggagac
tacggctccccagacggctccgcgcccaggacgcccaccttccggctccctccggacccc
cggtccgacatcgccttcgtgccccggccgctgcctccgtccagatccgacccaccgccg
ctcagcctggcgccacggcccggaccgccgtacggtgaccaggaggagggaggagacttc
agggggtggaggccgggggcggggcttcctccgttcactgacagaggaggcggcgagggc
ggcgggccacggagggtgtatgagaggcgctacgagacgcacgccagcctgagtgccacc
gaggattgtgggattctgcacggctgtgagaacggccagtgcatccgcgttgccgagggt
tacacctgcgactgctacgtgggcttcgagctggacctgacctccatgagctgcatcgac
attaacgagtgtgaagacgctgctgcgctgccgttcccgtgcatcaacgctcgctgcgtc
aacacagaaggctccttccgatgcgtctgcaggagaggttacgtcatgtcgcgcagacgc
aaccactgcatcgctgcttag
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