KEGG   Xiphophorus maculatus (southern platyfish): 102223847
Entry
102223847         CDS       T02923                                 
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein A1-like
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
xma  Xiphophorus maculatus (southern platyfish)
Pathway
xma03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:xma00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    102223847
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:xma03019]
    102223847
   03041 Spliceosome [BR:xma03041]
    102223847
Messenger RNA biogenesis [BR:xma03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     102223847
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     102223847
Spliceosome [BR:xma03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    102223847
SSDB
Motif
Pfam: RRM_1 RRM_7 RRM_PARP14_3 Nup35_RRM_2 RRM_3
Other DBs
NCBI-GeneID: 102223847
NCBI-ProteinID: XP_023192013
Ensembl: ENSXMAG00000008076
UniProt: M4A0V1
LinkDB
Position
1:16095173..16098680
AA seq 341 aa
MSKDVPREPEQLRKLFIGGLSFETTDESLRAHFEQWGSLTDCVVMRDPNSKRSRGFGFVT
YSSVQEVDAAMSARPHKVDGRVVEPKRAVSREDSNRPGAHVTVKKIFVGGIKEDTEESHL
RDYFQQFGKIEVIDIMTDRNTGKKRGFAFVTFDDHDSVDRIVIQKYHTINSHNCEVRKAL
TKQEMQSVGMGMRGGRNSGGRPYDYDRGFNQGGRGRYGDGPNNWNDGGYGGGPGGPGGYN
NGGNRGYNQGYNQGGGGGGGGGGYGGNSYDSNGYGNCGGGGGGGGGSNYNNMGHYDPQAS
NFGPMKNNFGGGGGGGGGGRSFGGYGGGSNNPGGYGRPGRF
NT seq 1026 nt   +upstreamnt  +downstreamnt
atgtcaaaagacgtcccacgtgagccggagcagctccgcaagctgttcattggaggcctg
agctttgagacaacagatgagagcctgcgggctcattttgaacaatgggggtcccttaca
gactgtgtggtcatgagagaccccaacagcaagaggtccaggggtttcggctttgttaca
tattcgtcagtgcaggaagttgatgctgccatgtctgcccgtccccacaaagtggacgga
agggtcgtggagcctaagcgtgcagtttctagagaggactcaaaccgtccaggtgctcat
gtaacggtcaagaaaatctttgtgggaggcatcaaagaagacacagaggagtcgcacctt
agggattacttccagcagttcggcaaaatcgaggtcattgatatcatgaccgaccgcaac
actggaaagaagaggggtttcgcttttgtcacgtttgatgaccatgattcagtggatagg
attgtcattcagaaatatcacacaatcaactctcacaactgtgaagtgaggaaggccctc
accaagcaggaaatgcagagtgtaggaatgggaatgagaggaggacgtaacagcgggggg
aggccatatgattacgacagaggcttcaaccagggaggtaggggcagatatggagatggt
cctaataactggaatgatggtggttacggagggggtcctggtggtcctggcggctataac
aacggcggcaacagaggttataaccagggctataaccagggtggtggtggtggaggtggc
ggcggaggctacggtggaaacagttatgacagcaacggttatggtaactgtggaggaggc
ggtggtggcggcggtgggagtaactacaacaacatgggccattatgacccccaggcctct
aactttggcccaatgaagaacaactttggcggcggcggcggcggtggtggcggcggcagg
agctttggtggctacggaggtggctctaacaatcccggtggctatggccgcccaggacga
ttttag

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