Xiphophorus maculatus (southern platyfish): 102223950
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Entry
102223950 CDS
T02923
Symbol
fubp1
Name
(RefSeq) far upstream element-binding protein 1 isoform X6
KO
K13210
far upstream element-binding protein
Organism
xma
Xiphophorus maculatus (southern platyfish)
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xma03019
]
102223950 (fubp1)
03041 Spliceosome [BR:
xma03041
]
102223950 (fubp1)
Messenger RNA biogenesis [BR:
xma03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
102223950 (fubp1)
Spliceosome [BR:
xma03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
102223950 (fubp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
KH_2
KH-I_KHDC4-BBP
FUBP_C
KH_KhpA-B
KH_Vigilin
Secretin_N
Motif
Other DBs
NCBI-GeneID:
102223950
NCBI-ProteinID:
XP_005815323
Ensembl:
ENSXMAG00000007168
LinkDB
All DBs
Position
6:23373151..23387106
Genome browser
AA seq
656 aa
AA seq
DB search
MADYSSVAPPSSNAGGGMNDAFKDALQRARQIAAKIGGDGVVAPPTNEFGYGGQKRPLED
AEQPETKKVATNDAFSAMGGMGGPPRSTSEEFKVPDGMVGFIIGRGGEQISRIQQESGCK
IQIAPDSGGMPDRSVTLTGAPESIQAAKRLLTEIVEKGRPAPAFHHNDGPGMTVQEIMVP
ASKAGLVIGKGGETIKSLQERAGVKMVMIQDGPQNTGADKPLRISGDPFKVQQAKEMVME
LIREQGFREQRGEYGSRVGGGDSLDVPVPRFAVGIVIGRNGEMIKKIQNDTGVRIQFKPD
DGTTPDRIAQIMGPPDQAQHAAEIISDLLRSVQAGGPPGHGGGRGRGRGQGNWNMGPPGG
LQEFSFTVPTMKTGLIIGKGGETIKGISQQSGARIELQRNPPPNADPNIKMFTVRGNPQQ
IDYARQLVEEKIGGPVTPMGGPHGPPGPHGGPGPHGPPGPPGPPGAPMGPYNPGPYNQGP
PGPHGPPAPYQPQGWGNGYPHWQQGQPDPNKAAADANAAAWAAYYAQYGQQPQASMTPTS
GAPGTAQPNGQGDPQAAGQSGQTDYTKAWEEYYKKMGQQNQPPQDYTKAWEEYYKKQGQA
APQAAPAAAPAAAQPGGQPDYSAAWAEYYRQQAAYYGTGNPQAMGAAPQAPQVHRE
NT seq
1971 nt
NT seq
+upstream
nt +downstream
nt
atggcagactacagcagcgtggctccaccgtcctctaacgctggtggggggatgaacgat
gcttttaaagacgctttacagcgagcgagacagatcgcagccaagatcggcggagatggc
gttgtggctccaccaacgaacgagtttggctacggaggccagaaaaggcccctggaggac
gctgaacaaccagaaacaaagaaagtagctacaaatgacgccttctcagccatgggaggg
atgggcggccctccaagatcaacatcagaagaattcaaggttccagatggaatggttgga
tttattattggaagaggaggtgaacaaatatcccgcatccagcaggaatctgggtgtaaa
atacagattgctcctgacagcggagggatgcctgacaggtcggtgacattaacgggggca
ccagaatcaatccaggccgcaaagagacttcttactgagatcgtggagaagggacgtccg
gctcctgctttccaccacaacgacggtccgggaatgacggtccaggaaattatggtgcct
gcttccaaagctggcctcgtcattgggaagggaggagagaccatcaaaagccttcaggaa
cgagccggtgtgaagatggtcatgatccaagacggacctcagaacacgggtgcagacaag
ccactccgcatttccggagacccatttaaagtccagcaagccaaagagatggtgatggag
ctgatcagagagcagggcttcagggagcagcggggcgagtacgggtccagggtcggagga
ggagacagcttagatgttccagtcccgcggtttgcagttgggattgtcatcggcagaaat
ggagagatgataaagaaaatacagaacgacacaggagtcagaattcagttcaaaccagat
gatggcaccacgcctgacaggatagcacagatcatgggccctccggaccaggcccagcat
gcagcagagatcatctcggacctgctgaggagcgtccaggctggaggccctccggggcac
ggagggggcaggggacgtggtcgtgggcagggcaactggaacatggggccccctggtggc
ctgcaggagttctcctttacagtaccaaccatgaagaccgggctgatcattggaaaaggg
ggcgagacgatcaaaggcatcagccagcagtcgggagccaggattgagctgcagaggaac
cctccacccaacgccgaccccaacataaagatgttcaccgtcagaggaaaccctcagcag
atcgactatgccaggcagctggtggaggagaagattgggggtccagtcactccgatggga
ggcccacatggtcccccaggtccacatggtggaccaggtccgcatggtcctccgggacca
ccaggacccccaggcgctccaatgggaccttacaaccctggaccttacaaccaaggccct
ccaggaccacatggccctcctgctccttatcagcctcaaggatgggggaacggttatcct
cactggcagcagggccagccggatccaaataaagcagcagctgatgccaacgcagcagcg
tgggcagcgtactacgctcagtacggccagcagccccaggcctccatgactccaaccagc
ggggctccaggcacggctcaacccaacggtcaaggtgacccacaggctgcaggtcagagt
ggacagacagattacaccaaggcctgggaggaatattacaagaaaatgggtcaacagaat
cagccacctcaggactacacaaaagcctgggaggagtattacaagaaacaaggtcaagct
gcaccgcaggccgctccagcggcggcaccggcggccgctcagcctggaggccagccggac
tacagcgctgcctgggctgaatactaccgtcagcaggctgcctactacggcactggaaac
cctcaggcgatgggtgcagcgccacaagcccctcaggtacaccgcgaataa
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integrated database retrieval system
