Xiphophorus maculatus (southern platyfish): 102224181
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Entry
102224181 CDS
T02923
Symbol
ctcf
Name
(RefSeq) transcriptional repressor CTCF
KO
K23195
transcriptional repressor CTCF
Organism
xma
Xiphophorus maculatus (southern platyfish)
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xma03000
]
102224181 (ctcf)
03036 Chromosome and associated proteins [BR:
xma03036
]
102224181 (ctcf)
Transcription factors [BR:
xma03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
102224181 (ctcf)
Chromosome and associated proteins [BR:
xma03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
102224181 (ctcf)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-C2H2_16
zf-H2C2_5
zf-C2H2_jaz
zf-C2H2_7th_ZNF462
zf-C2H2_REST
Zf-C2H2_ZNF451_C
Zf-C2H2_ZNF451
zf-met
Actin_micro
LIM
zf-C2HE
zf-C2H2_6
zf-C2H2_15
DTHCT
zf-WIZ
C2HC_ASCIZ
Motif
Other DBs
NCBI-GeneID:
102224181
NCBI-ProteinID:
XP_005807761
Ensembl:
ENSXMAG00000014187
UniProt:
A0A3B5QK62
LinkDB
All DBs
Position
4:15949041..15956632
Genome browser
AA seq
753 aa
AA seq
DB search
MEGEVVSMESAQAAALGADGKVLPEGGEALIQAAQGEVAGDMNMMVMDALDPTLLQMKTE
VLEGGGTVTVTGGDEGQIITLQVVNMEEQAGAALGLGQLQLVQVPVTTTTVEGLQATFVE
ASGANKDAEPVICHTLPLPEGFQVVKVGANGEVETVEQEELQAAHDELQATQEEEEEDDE
VVEPEAAVPQQEDPEWSKDPDYQPIAAIRKGKKGKKSRLRYAEGDRDMDVSVYDFEEEQQ
EGLLSEVNAEKVVGNMKPPKPTKIKKKGVKKTFQCELCSYTCPRRSNLDRHMKSHTDERP
HKCHLCGRAFRTVTLLRNHLNTHTGTRPHKCTDCDMAFVTSGELVRHRRYKHTHEKPFKC
SMCDYSSVEVSKLKRHIRSHTGERPFQCSLCSYASRDTYKLKRHMRTHSGEKPYECYICH
ARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQHSFIETGKKCRYCD
AVFHERYALIQHQKTHKNEKRFKCDQCDYCCRQERHMIMHKRTHTGEKPFACSQCEKTFR
QKQLLDMHFKRYHDPNFVPTAFVCSKCSKTFTRRNTMLRHAENCMGEAGGDENGDPSPKK
GRRGRKRKMQSRRDDDDDDDDNTEGELDEVEDEEDEMLDEIEVEQAEPVVPIPAPVEPPV
KRKRGRPPKNKPDPAAIIRVEDEVTGEVDDIIVKKEVGAEQEEGTMEEVVVGGVKSTIQL
EELSQVEGAEVQMSEAPPNGDLTPEMILSMMDR
NT seq
2262 nt
NT seq
+upstream
nt +downstream
nt
atggagggcgaggttgtttccatggagtcggctcaggccgctgccctgggcgctgacgga
aaggtcctaccggagggcggagaagctctgatacaagcagcgcagggagaagtggccggt
gacatgaacatgatggtgatggacgcactggatcccactctgctgcagatgaaaacagaa
gtgttggagggaggcggcacggtgacggttaccgggggagacgagggtcagatcatcaca
cttcaggtggtgaatatggaggagcaggccggtgccgcattaggtctcggtcagcttcag
ctggtgcaagtcccggtcacaacaacaactgtagaggggctccaggccacttttgttgag
gcatcaggagctaacaaggatgcagaacctgttatctgccacacccttcctttgcctgag
ggcttccaggttgtaaaagtgggagcgaatggtgaggtggagactgtagagcaggaagag
ctccaagcagcccacgatgagctccaagcaacacaggaggaggaagaggaagatgacgaa
gtggttgaacctgaagctgctgtccctcagcaagaagacccagaatggtcaaaggatcca
gattaccagcccatcgctgctatccgcaaagggaaaaagggcaaaaagagccgacttcgg
tatgcagaaggagatcgggacatggatgtttctgtgtacgactttgaggaagaacagcag
gaggggctcctgtcagaggtcaatgctgagaaggttgtgggcaatatgaagcctccaaag
cccaccaagatcaagaaaaaaggtgtgaagaaaactttccagtgtgagctctgtagctac
acctgtccaagacgttctaatctggatagacacatgaagagccacactgacgagcggccg
cacaaatgtcacctgtgtggcagagccttcagaacagtcacgctgctgaggaaccacctg
aacacacacacaggcacccggccacacaaatgcacagattgtgacatggcgtttgtgacc
agtggagagttggtgcgtcatcgtcgctacaaacacacacatgagaaacccttcaagtgt
tcaatgtgcgactattccagtgtggaggtgagcaagttgaaacggcacatccgctctcac
actggggagcggccgttccagtgcagtctttgcagctacgccagcagagacacctacaag
ctgaaaagacacatgaggacacattcaggggagaagccgtacgagtgttacatctgccac
gcccgtttcacacagagcggcaccatgaagatgcacattctgcagaaacacacagaaaac
gtggccaagttccactgcccccactgcgatacggtgatcgctcgcaagagtgatctaggt
gttcacttgcggaagcagcactcatttatcgagacggggaagaaatgtcgttactgcgac
gctgtgtttcacgagcgctacgctctgatccaacaccagaagactcacaagaacgagaaa
cgtttcaagtgcgaccagtgtgattactgctgcagacaggagcgccacatgattatgcac
aagcgtacacacacaggggagaagccatttgcctgtagccagtgtgagaagactttccgt
cagaagcaacttctggacatgcacttcaagcgttaccatgatccaaactttgttcccacc
gccttcgtctgcagcaagtgtagcaagaccttcactcgcaggaacacaatgctgcgtcac
gcagagaactgcatgggtgaagctggtggagatgaaaacggagacccgtctcccaagaag
ggacggcgtggcagaaagaggaagatgcagagcagaagggacgatgatgacgacgatgac
gataacactgaaggagaactggatgaagtagaagacgaggaagatgaaatgctagatgag
atcgaagtggaacaagccgaaccagttgtcccaattcctgcaccagttgaacccccagtg
aagaggaaacgtggacgccccccgaagaacaagcctgaccccgctgccatcatccgtgtg
gaggatgaggtcacaggggaggtggatgacatcatcgtgaagaaggaggtcggtgcggag
caggaagagggcaccatggaggaggtggtggttggaggcgtcaagtcgaccattcagttg
gaggagctgtctcaggtagaaggagcggaggtgcagatgagcgaggccccgcccaacgga
gacctgacccccgagatgatcctcagcatgatggaccgatga
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integrated database retrieval system
