Xiphophorus maculatus (southern platyfish): 102224255
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Entry
102224255 CDS
T02923
Name
(RefSeq) C-myc promoter-binding protein-like isoform X1
KO
K20163
DENN domain-containing protein 4
Organism
xma
Xiphophorus maculatus (southern platyfish)
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xma04131
]
102224255
Membrane trafficking [BR:
xma04131
]
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
102224255
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DENN
dDENN
uDENN
PPR_2
PPR_3
DUF2464
PPR_long
PPR
Motif
Other DBs
NCBI-GeneID:
102224255
NCBI-ProteinID:
XP_023188273
Ensembl:
ENSXMAG00000010376
LinkDB
All DBs
Position
4:3542823..3614397
Genome browser
AA seq
1970 aa
AA seq
DB search
MMEDKGPRVADYFVVAGLTDPSKPLDQEIHFDDVCHKTAKPKAPITDVAVVIRSLGEEVP
PGFACIETTPSGHLADLNNGGLMAPQIFLCYRRGRDKPPLTDLGVLYEWKERLKQGCHLI
QTTPAGRPANISGNSSQRIYVTYRRAPDSQPHASLAVTDICIIIPSKGETPPHTFCKVEK
NLNSSMWGSSVYLCYKKSVAKTNVIAYKAGLFSRYPEEDYESFPLPESVPLFCLPMGATI
ESWPANTKYSLPVFSTFVLTGASGEKVYGAAIQFYEPYPQECLTDTQLSQLGLLSPEQCN
ASPSSSAADAAINPGNGAANTSSVYTNKCICLLSHWPFFDAFRKFLTFLYRYSISGPHAL
PIEKHISHFMHKVPFPSSQRPRILVQLSPHDSLMLSQPVSSPLPLSGGRFSTLLHNLGPE
NAVTLLVFAVTEHKILVHSLRPAVLTSVTEALVSMIFPFHWPCPYIPLCPLALADVLSAP
CPFIVGVDSRYFDLYDPPPDVNCVDLDTNTIFHNDDKRALTWKILPKKACKNLMNLLSNL
HQQLVDGQYRSDGLLELSMSDSQELSCGKSLHTLELEIQEAFLRFMAAILKGYRSFLRPI
TQAPSEKATDASSLFDLQGFLKSRDRSHQKFYSLMTKTQMFIRFIEECSFVSDKDTSLAF
FDDCVDKLYNSERSAEKGGKVDGERPDETRLIEIDESQRSEHTVFITPPELPPLPDGEEY
PLCYRYDGFPVLTLELFDPVEGLRTPSSRLAARHSCPTSPAPMFRRTKQEIKSAQKIAKK
YSSIPQLWSKCLLRHCYGLWFICLPAYVKVCHSKVRALRTAYDVLRKMQAKKLQPPDEVC
YRVLMQLCGQYGQPVLAVRVLFEMKKAGVHPNAITYGYYNKAVLESTWPSSTRGGYFLWM
KLRNVILGVAQFKRALRRHGPLTQSPLSDGSDLDAVSHGSLDSSADPNPAEQSPVEPADD
RSSTVGGGGDSVGARPVAARSPWVGAELREATLHPGDQSDLGYNSLSKEEVRRGDAAPPD
KDEKKESDCSSLSETESVKGSKDCLPQLDLEIGSSFKPRGIVRSSYPYGDSARKPRSSTS
AGHIAGLLFTTSLDEIGEVHANSLLRRHRSALEEVVGSSGSSAIVDWQTARARHVSGDTT
GSGATVLGLGMSQAETDPHKIAGLLGADAKILSVTNYSQKRHLGGFNHKEEEEEQSYSDE
DKSNMEAIFDFEDLDLEKPALGVRHLKKPVERSASYGGMSSAAPRGAVTRTGIETGFDPL
SLMAAESQITTYPDGDEAGAPGARRNLAREIELYMSHLDTPLSSRTSSSELQGPASPLLL
HPHAAAAFRRSSLPHAAPLRTSAMPRSRTFHQASPARPASRQRLVSSPSGRSSSTSPSLS
PFRERLASPSSSAFALDALLTPTLDVFKTSVVSAGKGVAERASRWYSRFATSNTPTKDGF
SDRLSVSSLNVGDPDGSIQDEGEYGETEQLGVSPQKNGPSCPHRSPVHSRVDSPTAGRSL
GRPTSLPPGCPLSLPGFSLPDKSDLGSSRCTSNTSIFNNYAMELLISSCSRCKTCDCLVY
DEEIMAGWTADDSNLNTTCPFCGNPFLPFLNVEIRDMRGPGRLFLKGSPSMDDAMTSSYS
ASTGLDTGTSTLSTPCPTTAVFPPSPTAAAKETPGRTWPSRAQGINIPTERRQGALSSGG
PMTRSISAFSPMEEESQLSHHLPTSGSLPSHLNEAADPLSMDWQLHNPEPVTVPYLSPLV
LWKELESLLENEGDPVIAEADMVDHHPIIYWNLLWYFRRLDLPSSLPGLILTSEHCNRDS
QVPRHWMSEDSKHVLIQILWDNLKLHQDPVQPLYILWNTYRLNCTLLLENVGYPLSRPVP
DEEKPLTDELLQGVVRSIQRNDVGRPMAQLLQLLDRMLGVKRQRSLYRDILFLSLVALGK
DNIDIDAFDREYKLAYDRLLPPLVRLTHNCDRPPGAGVMECRRTFGEPYL
NT seq
5913 nt
NT seq
+upstream
nt +downstream
nt
atgatggaggacaaaggtccccgtgttgccgactacttcgtggttgccggtctgacggac
ccgtccaagccgttggaccaggagatccactttgatgatgtgtgccacaagacggccaag
cccaaagcgcccatcacggacgtggcggtggtgatccgctccctgggcgaggaggttcct
ccggggttcgcgtgcatcgagaccacgccgagcggacacttggccgatctgaacaacggc
ggcctcatggcgccgcagatcttcctgtgctacaggcgaggccgcgacaaaccgccgctc
accgacctgggagtcctgtatgagtggaaggagaggttgaagcagggctgccacctcatc
cagaccacgcccgctggtcgtcccgccaacatcagcggcaactcctcccagcgaatctac
gtcacgtaccggcgagcgccggacagccagccgcacgcctccctggccgtcaccgacatc
tgcatcatcatcccgagcaaaggcgagacgccgccgcacaccttctgcaaggtggagaag
aacctcaacagcagcatgtggggctcctccgtttacctgtgctacaagaaatctgtggcc
aaaaccaacgtgatcgcctacaaagcaggtttattcagcagatatccggaggaggactac
gagtctttccctctgccggagtcggtccctctcttctgccttcccatgggggcaacaatc
gagagctggccagcaaacaccaagtactccctgcctgttttctccaccttcgtcctcacc
ggcgcatctggagagaaggtttacggtgctgccatccagttttatgagccctacccacag
gagtgcctgactgatacgcagctctcccagttgggcctgttgagcccagaacaatgcaac
gcctctccatccagctctgcagcggacgccgccatcaatcctggaaacggcgccgccaac
accagctcagtctacaccaacaagtgcatctgcctgctgtcccactggcccttcttcgac
gctttccgcaagttcctcacattcctctatcgatactccatctccggcccgcacgcgctg
cccattgagaaacatatctctcacttcatgcacaaagttcccttcccttcctcccaaagg
cctcgcatcctggtgcagctttctcctcatgacagcctgatgttgagccagccagtgagt
tctcccttaccgctcagcggaggaaggttttccactctgctccataacctcggtccggag
aacgccgtcaccctgctggtgttcgccgtcaccgagcataaaatcctggtccattcttta
cggccggcggtgctgaccagcgtcacagaggcgctggtgtcaatgatcttccccttccac
tggccgtgtccctacatcccgctctgccccctggcgttggccgacgtgttgagcgccccc
tgtccgttcatcgttggcgtcgactcccggtactttgacctctacgaccctccgcctgac
gtgaactgtgtggacctggacacaaacaccatcttccacaacgacgataaacgcgctctg
acatggaagatcctgccaaagaaagcgtgtaaaaacctgatgaatctgctgagtaatctc
caccagcagctggttgacggtcagtaccgctccgacgggctgctggagctcagcatgagc
gactcacaagagttgagctgtgggaagagcctccatacgctggagctggagatccaggaa
gccttcctgcgcttcatggcggccattttaaaggggtaccgctccttcctgcggcccatc
acacaggcgccgtcggagaaggccactgacgccagctcgctcttcgacttacaaggattc
ttgaagagccgcgaccgctctcaccagaagttttactcgctcatgaccaagacccagatg
ttcatccgcttcatcgaggaatgctcgttcgtcagcgacaaagacaccagcctggcgttc
tttgacgactgtgttgacaaactttacaactcggagcggagcgcagagaaaggagggaag
gtggacggcgagcggccggatgagacgcggctgatcgagatcgatgagtcgcagcgcagc
gagcacacggtgttcatcactcctccagagctgccgccgctgcccgacggggaggaatac
ccgctctgctacaggtatgatggtttcccggtgttaactctggagctgttcgacccggtg
gagggcctgcggacgccctcctcccgcctcgctgcccggcacagctgccccacaagcccc
gcccccatgttcagacgtaccaaacaggagatcaaatcagcgcagaagatcgccaagaag
tattcgtccatcccccagctgtggtccaagtgcctgctgcgtcactgctacggcctgtgg
ttcatctgcctgccggcgtacgtcaaggtgtgccactccaaggtgcgggcgctccgcacc
gcctacgacgtcctcaggaagatgcaggcgaagaagctgcagccgcccgacgaggtgtgc
taccgggtcctgatgcagctgtgtgggcagtacggtcagccggtcctggcggtcagagtc
ctgtttgagatgaagaaggccggtgttcaccccaacgccatcacctacggatactacaac
aaggcagtgctggagagcacgtggccctccagcaccagaggaggatacttcctgtggatg
aagctgaggaatgtcattctgggcgtggctcagttcaaacgagctctgcgccgacacgga
ccgctcacccagagcccgctgtcagatggcagtgatctggacgcagtgagtcacggcagt
ctggacagctctgccgacccgaacccggccgagcagagcccagtagaacccgctgacgat
agatctagcacagtgggcggcgggggcgacagcgtgggggccaggcccgtggcggcccgc
tctccctgggtgggcgctgagctcagagaggccactctccacccaggagatcagtcggat
ttgggttacaactctctgtcaaaggaggaagttcgtagaggcgacgccgctccccccgac
aaagacgagaagaaggagagcgactgcagctccttgtcggagactgaaagcgtgaagggc
agcaaggactgcctgcctcagctggacctggagatcggctcctccttcaagcctcgagga
atcgttcggagcagctatccgtacggggattctgcccggaaaccccggagctccaccagc
gcaggccacatcgctggcctcctcttcaccacgtctctggatgagatcggcgaggttcac
gccaacagcctgctgcggcgacaccgcagcgccctggaggaggtggtgggcagctccggc
agcagcgccattgtggactggcagacggcgcgggcccgccatgtgagcggcgacacgacg
ggcagcggcgccaccgtcctcggcctcggcatgagtcaggcggagaccgaccctcataag
atcgccgggctgctaggcgccgacgccaagatcctgtccgttaccaactacagccagaag
cgtcacttaggaggctttaatcacaaagaggaggaggaggaacaaagctacagtgatgaa
gataagagtaacatggaagctatttttgattttgaggatctggacttggagaagccagct
ctgggggtcagacatctgaaaaagcccgttgagcgcagcgccagctacggcggcatgagc
tcggcggcgcccagaggagccgtgactcgaaccggcatcgaaacgggcttcgacccgctc
tccctgatggccgccgagtcgcagatcaccacgtacccggatggcgacgaggccggagcg
ccgggcgcccgccgtaatctggcccgggagatcgagctgtacatgagccacctggacacg
ccgctgagcagccgcacgtccagctccgagctgcagggcccggccagcccgctgctgctc
cacccccacgccgccgccgctttccggaggtccagtttgccccacgctgctccactcagg
accagcgcaatgccacgctcacgcaccttccaccaggcgtcgccggcccggcccgcgtcc
cgccagcggttggtgtcgtcgccgtcgggccgcagctccagcaccagccccagcctcagc
cccttcagggagcgcctcgcctcgccgtcctcctccgccttcgccctggacgccctgctc
accccgacgctcgacgtcttcaagaccagcgtggtttctgctgggaagggcgtggcggag
cgggccagccgctggtactcgcgtttcgccacgtccaacacgccaaccaaggatggcttc
agcgaccgtctgagcgtttcctccctcaacgtcggagatccagacggctccatccaggac
gaaggggagtacggggagacggagcagctcggcgtctcccctcagaagaacggtccctcc
tgtccccacaggagtcccgtccacagccgggtggacagtcccactgcaggacgcagcctg
ggcagacccacgtctcttcctcctggttgtcctctgtctctgcccgggttctctctgccg
gacaagtccgacctcggatcgtcacgctgcaccagcaacaccagcatcttcaacaactac
gctatggagctgctgatctccagctgctctcgctgtaaaacctgcgactgcctggtttac
gacgaggagatcatggctggatggacggccgacgactccaacctcaacaccacctgcccc
ttctgcggaaaccccttcctgccgttcctcaacgtggagatccgggacatgagaggaccc
gggaggctcttcctgaagggcagcccgtccatggatgacgccatgacctcgtcgtactcc
gcctccacgggtctggacacggggacgtccacgttgtccacgccgtgtcccaccacagcc
gtgttccctccctcacccacagcagccgcaaaggaaactcctgggaggacttggcccagc
agagctcaaggcatcaacatccccacagagcgccgccagggggcgctgtcctccggcgga
cccatgacccgcagcatcagcgccttcagccccatggaggaagaatctcagctcagccac
cacctgccgacgtccggcagcctgccgagccatctgaacgaagccgcggacccgctcagc
atggactggcagctccacaacccggagcccgtgacggtgccgtacctgagcccgctggtt
ctgtggaaggagctggagagtctgctggagaacgagggcgacccggtgatcgccgaggcc
gacatggtggaccaccaccccatcatctactggaacctgctgtggtatttccgccggctg
gacctgcccagcagcctgccgggcctcatcctcacctctgagcactgcaacagagactcc
caggtccctcgtcactggatgtccgaggacagtaaacatgttctgatccagatcctatgg
gacaacctgaagctgcatcaggacccggtccagcctctgtacatcctctggaacacatac
aggcttaattgcactctgttgttagagaacgtgggctaccctctgtcccggccggtcccg
gatgaggagaagcctctgacggatgagctgctgcagggcgtggtgcgcagcatccagagg
aacgacgtcggccggccgatggcgcagctgctgcagctgctggaccggatgctgggggtc
aaacgccaaaggagtttgtacagagacatcctcttcctgtccctggtggcgctgggaaaa
gataacatcgatatcgacgccttcgatcgtgagtacaagctggcgtacgaccgcctgctg
cccccgctggtcaggctgacccataactgtgaccgtcctccgggcgccggcgtcatggag
tgccgccggacattcggagagccttacctgtga
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