KEGG   Xiphophorus maculatus (southern platyfish): 102224258
Entry
102224258         CDS       T02923                                 
Name
(RefSeq) RNA polymerase II elongation factor ELL2-like
  KO
K15183  RNA polymerase II elongation factor ELL
Organism
xma  Xiphophorus maculatus (southern platyfish)
Pathway
xma03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:xma00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    102224258
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:xma01009]
    102224258
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:xma03021]
    102224258
Protein phosphatases and associated proteins [BR:xma01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     102224258
Transcription machinery [BR:xma03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Super elongation complex (SEC)
     102224258
    Little elongation complex (LEC)
     102224258
SSDB
Motif
Pfam: ELL Occludin_ELL Med19
Other DBs
NCBI-GeneID: 102224258
NCBI-ProteinID: XP_005808592
Ensembl: ENSXMAG00000018147
LinkDB
Position
4:complement(28230201..28261749)
AA seq 601 aa
MASLRQEHRYGLSCGKTTKNSSNSTLYHVKLTDTAIRALEAYQNLKGVLQNETSICFKGN
HGYFKIPTPTPESPSALRIFSFYLSSDSKDQPQASFDCIHQYISSDGREQLEGQGSIQDK
ITVCATDDSYQMTRERMSQMEKDSWSRSAIEIKPGATQPNKSVKYQKRSAPLSAPESSVF
KQPSTNRRSCGMPTPTPKPLRERIIHLLALKPYRKPELLLWLERERASTKDKAELGAVLD
EVARVNPKDSSYLLKDDFYKHVQRDWPGYSEEEKQLISRLLSRKLQPHISNKSRNVQAHL
SMPATPEDPSAAKNPAVKRSLPLDSQEKLAAKRQKLTDQRLYQSAAKGLANTKGAHDNAA
VTFDPSLISVAEPQLIGGIPGDPCGLTVAHGGFPFDHGLSDGHISEKKEQDANVNKLKTP
QGDSGCTQQQLHNSQHRKKKSKKHKEKERERLKSDKGAEWLQSSPDLKQNPEKLDNPDNT
SAAASEEKPDYMLAYSPISSLEQRQRYQEDFCTEYDEYKDLHSRIAAITHMFVQLGSKIK
TLSPGTREYKTMEDQILEKYSKFRKKFPGYREEKKHCEYLHEKLSYIKQLIIDYDLSKPS
S
NT seq 1806 nt   +upstreamnt  +downstreamnt
atggcttcactcaggcaggagcaccgctacgggctctcctgcggaaaaactaccaaaaac
agctccaacagtactctgtaccacgtcaagctgacggacacggccattagagcgctggaa
gcctatcaaaacctcaagggagttttgcaaaatgagacatcaatctgttttaaaggaaac
cacgggtacttcaagatcccaactccaacaccagagtcaccttctgctctgcgcatcttc
tccttctacctgtccagtgacagcaaagaccagcctcaagccagctttgactgcatccat
cagtacatctcgagcgacggccgcgagcagctggagggccaaggcagcatccaggacaag
atcaccgtgtgcgccaccgacgactcctaccagatgacccgcgagaggatgtctcagatg
gagaaggacagctggagccgctcggccatcgagatcaaacccggagccacgcagcctaat
aaaagcgtcaaataccaaaagagatccgctcccctgtctgctcctgaaagtagcgtcttc
aagcagccgtccaccaaccggaggagctgcggcatgccgacccccaccccgaagcccctg
agggaacgcatcatccacctgctggccctcaaaccttacaggaaaccagagcttctcctg
tggctggagagagagcgagcctcaacaaaggacaaggccgagctgggagccgtgctcgac
gaggtggccagagtgaatcccaaagacagcagctacctgctgaaggacgacttctacaag
cacgtgcagagggactggccgggctacagcgaggaggagaagcagctcatcagcaggctg
ctgtccaggaaacttcagccccacatcagcaataaatcacgcaacgttcaagcacacttg
tcaatgcctgcgacccctgaggacccaagcgcagcgaaaaacccagctgtgaaacgttct
ttacccctggactcacaggaaaaactggctgcgaagaggcaaaaacttacagaccaaagg
ctataccagtctgcggcaaaaggactcgcaaacactaaaggagcacatgataatgcagct
gtgacctttgaccccagtctcatctccgttgctgaacctcagctgatcggtggcattcct
ggtgacccctgtggcctaactgtggcccacggtggctttcctttcgaccacggcctgtct
gacggacatatttctgagaaaaaagagcaggacgccaacgttaacaagctgaaaacgccg
cagggcgactctggctgcactcagcagcaactccacaacagccagcacagaaagaagaaa
tctaaaaagcacaaagaaaaggagcgggagaggttaaaaagtgacaaaggagccgaatgg
ctgcagtcgagtcccgatctcaagcagaacccagaaaaacttgacaatcctgacaacaca
agtgctgcggcctccgaggagaagccggattatatgctggcgtacagccccatctcaagt
ttggagcagcggcagcgatatcaggaggatttctgcacagagtacgacgagtacaaagac
cttcactcccggattgctgccataactcacatgtttgttcagctgggctccaagatcaag
actctgtctcctggcacacgggagtataagactatggaagaccaaatactggaaaagtac
agcaagtttcggaagaagtttccaggctaccgggaggaaaagaagcactgcgagtatctt
catgaaaaactgtcgtacatcaaacagctcatcatcgactatgacctctccaagccctct
tcatag

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