Xiphophorus maculatus (southern platyfish): 102224288
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Entry
102224288 CDS
T02923
Symbol
polb
Name
(RefSeq) DNA polymerase beta
KO
K02330
DNA polymerase beta [EC:
2.7.7.7
4.2.99.-]
Organism
xma
Xiphophorus maculatus (southern platyfish)
Pathway
xma03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
102224288 (polb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xma03400
]
102224288 (polb)
Enzymes [BR:
xma01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
102224288 (polb)
DNA repair and recombination proteins [BR:
xma03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Short Patch-BER factors
102224288 (polb)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
X-family DNA polymerases
102224288 (polb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_B_palm
HHH_8
DNA_pol_lambd_f
DNA_pol_B_thumb
HHH_5
HHH_2
NTP_transf_2
HHH_3
Cdd1
DUF4806
Motif
Other DBs
NCBI-GeneID:
102224288
NCBI-ProteinID:
NP_001273232
Ensembl:
ENSXMAG00000014540
UniProt:
Q66TP6
LinkDB
All DBs
Position
12:10704178..10709124
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AA seq
337 aa
AA seq
DB search
MSKRKAPQESLNEGITDFLVELANYEKNVNRAIHKYNAYRKAASTIAKYPNKIKNGEEAK
KLDGVGAKIAEKIDEFLQTGKLRKLEKIRNDDTSSSINFLTRVTGIGPAAARKFVEEGVK
TLDDLKKVEHKLNHHQKIGLKYFEEFEKRIPRVEMEKMEVLILGELKKIDPEYIGTICGS
YRRGAASSGDIDILLTHPNYTSQTEKQPKLLHAVVDHLESVGFVTDTLSKGDTKFMGVCQ
LQDTDDDEEEEHLHRRIDIRLIPKDQYYCGVLYFTGSDIFNKNMRTHALEKGFTLNEYTI
RPLGVTGMAGEPLLVDSERDIFEYIQYRYREPKDRSE
NT seq
1014 nt
NT seq
+upstream
nt +downstream
nt
atgagcaagaggaaagctccacaggagtccctaaatgagggaataactgactttcttgtc
gaactggctaactacgagaaaaatgtcaacagggcaatacataagtacaatgcatacagg
aaagcagcatccaccattgccaagtatcctaacaagattaaaaatggagaagaggcgaag
aaactggatggagttggtgctaaaatagcagaaaagatcgatgagttcttacaaactgga
aaactaagaaaacttgaaaagatcagaaatgatgacaccagctcttccataaatttcctc
accagagtcaccggaatcggacctgctgctgctaggaagtttgttgaagagggggtgaaa
acattggatgatttgaaaaaggtagagcacaagctaaatcaccaccaaaagattggactc
aagtactttgaagaatttgagaaaaggatccctagagttgaaatggaaaagatggaggta
cttattctgggggaattaaagaaaattgatccagaatatatcggaacaatctgtggaagc
tataggagaggtgcagcatcgagtggtgatattgatattttactgactcacccaaattac
acttctcaaacagagaagcagccaaaacttcttcatgctgtggtcgatcatttggagtcc
gttgggtttgtgaccgacactctgtccaaaggagacaccaagttcatgggagtctgccag
ctgcaggacactgatgatgacgaagaggaagaacatcttcacagacgcattgatattagg
ttaattcccaaggaccagtactactgtggagttctgtatttcactggaagtgacatcttt
aataagaacatgaggacacacgctctggagaagggcttcactctgaacgagtacaccatc
aggccacttggtgtcactggaatggcgggagagcctctgttggtggacagtgagagagac
atctttgaatacatccagtacagatacagagagccgaaggatcgtagcgagtga
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