KEGG   Xiphophorus maculatus (southern platyfish): 102224288
Entry
102224288         CDS       T02923                                 
Symbol
polb
Name
(RefSeq) DNA polymerase beta
  KO
K02330  DNA polymerase beta [EC:2.7.7.7 4.2.99.-]
Organism
xma  Xiphophorus maculatus (southern platyfish)
Pathway
xma03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:xma00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    102224288 (polb)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:xma03400]
    102224288 (polb)
Enzymes [BR:xma01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     102224288 (polb)
DNA repair and recombination proteins [BR:xma03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Short Patch-BER factors
     102224288 (polb)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    X-family DNA polymerases
     102224288 (polb)
SSDB
Motif
Pfam: DNA_pol_B_palm HHH_8 DNA_pol_lambd_f DNA_pol_B_thumb HHH_5 HHH_2 NTP_transf_2 HHH_3 Cdd1 DUF4806
Other DBs
NCBI-GeneID: 102224288
NCBI-ProteinID: NP_001273232
Ensembl: ENSXMAG00000014540
UniProt: Q66TP6
LinkDB
Position
12:10704178..10709124
AA seq 337 aa
MSKRKAPQESLNEGITDFLVELANYEKNVNRAIHKYNAYRKAASTIAKYPNKIKNGEEAK
KLDGVGAKIAEKIDEFLQTGKLRKLEKIRNDDTSSSINFLTRVTGIGPAAARKFVEEGVK
TLDDLKKVEHKLNHHQKIGLKYFEEFEKRIPRVEMEKMEVLILGELKKIDPEYIGTICGS
YRRGAASSGDIDILLTHPNYTSQTEKQPKLLHAVVDHLESVGFVTDTLSKGDTKFMGVCQ
LQDTDDDEEEEHLHRRIDIRLIPKDQYYCGVLYFTGSDIFNKNMRTHALEKGFTLNEYTI
RPLGVTGMAGEPLLVDSERDIFEYIQYRYREPKDRSE
NT seq 1014 nt   +upstreamnt  +downstreamnt
atgagcaagaggaaagctccacaggagtccctaaatgagggaataactgactttcttgtc
gaactggctaactacgagaaaaatgtcaacagggcaatacataagtacaatgcatacagg
aaagcagcatccaccattgccaagtatcctaacaagattaaaaatggagaagaggcgaag
aaactggatggagttggtgctaaaatagcagaaaagatcgatgagttcttacaaactgga
aaactaagaaaacttgaaaagatcagaaatgatgacaccagctcttccataaatttcctc
accagagtcaccggaatcggacctgctgctgctaggaagtttgttgaagagggggtgaaa
acattggatgatttgaaaaaggtagagcacaagctaaatcaccaccaaaagattggactc
aagtactttgaagaatttgagaaaaggatccctagagttgaaatggaaaagatggaggta
cttattctgggggaattaaagaaaattgatccagaatatatcggaacaatctgtggaagc
tataggagaggtgcagcatcgagtggtgatattgatattttactgactcacccaaattac
acttctcaaacagagaagcagccaaaacttcttcatgctgtggtcgatcatttggagtcc
gttgggtttgtgaccgacactctgtccaaaggagacaccaagttcatgggagtctgccag
ctgcaggacactgatgatgacgaagaggaagaacatcttcacagacgcattgatattagg
ttaattcccaaggaccagtactactgtggagttctgtatttcactggaagtgacatcttt
aataagaacatgaggacacacgctctggagaagggcttcactctgaacgagtacaccatc
aggccacttggtgtcactggaatggcgggagagcctctgttggtggacagtgagagagac
atctttgaatacatccagtacagatacagagagccgaaggatcgtagcgagtga

DBGET integrated database retrieval system